FFCP PHASE1:Hg19::chr8:4852606..4852615,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:4852606..4852615,-
|short_description=p17@CSMD1
|description=CAGE_peak_17_at_CSMD1_5end
|association_with_transcript=-112bp_to_ENST00000520002_5end
|Entre...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64478 | |EntrezGene=64478 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14026 | |HGNC=14026 | ||
|TSSclassifier=strong | |||
|UniProt=E5RIG2 | |UniProt=E5RIG2 | ||
|association_with_transcript=-112bp_to_ENST00000520002_5end | |||
|cluster_id=chr8:4852606..4852615,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_17_at_CSMD1_5end | |||
|id=chr8:4852606..4852615,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.39e-27;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.67e-99!57;UBERON:0005068!2.67e-99!57;UBERON:0006241!2.67e-99!57;UBERON:0007135!2.67e-99!57;UBERON:0002020!1.25e-93!34;UBERON:0003528!1.25e-93!34;UBERON:0001893!1.38e-93!34;UBERON:0002791!7.44e-90!33;UBERON:0002780!7.06e-88!41;UBERON:0001890!7.06e-88!41;UBERON:0006240!7.06e-88!41;UBERON:0001869!1.17e-86!32;UBERON:0003080!1.17e-85!42;UBERON:0002616!2.22e-85!59;UBERON:0001017!3.31e-77!82;UBERON:0000955!5.90e-75!69;UBERON:0006238!5.90e-75!69;UBERON:0005743!2.74e-73!86;UBERON:0002619!3.37e-68!22;UBERON:0002346!3.60e-67!90;UBERON:0003075!7.07e-67!86;UBERON:0007284!7.07e-67!86;UBERON:0000073!1.18e-65!94;UBERON:0001016!1.18e-65!94;UBERON:0001950!3.54e-60!20;UBERON:0000956!9.64e-60!25;UBERON:0000203!9.64e-60!25;UBERON:0003056!4.26e-57!61;UBERON:0007023!9.02e-43!115;UBERON:0000033!2.27e-41!123;UBERON:0000153!4.49e-39!129;UBERON:0007811!4.49e-39!129;UBERON:0002420!1.61e-36!9;UBERON:0007245!1.61e-36!9;UBERON:0010009!1.61e-36!9;UBERON:0010011!1.61e-36!9;UBERON:0000454!1.61e-36!9;UBERON:0002308!7.69e-36!9;UBERON:0000125!7.69e-36!9;UBERON:0000924!4.79e-34!173;UBERON:0006601!4.79e-34!173;UBERON:0004121!4.53e-33!169;UBERON:0009663!8.21e-29!7;UBERON:0000025!6.97e-25!194;UBERON:0001871!1.18e-24!7;UBERON:0000349!2.07e-21!5;UBERON:0002021!7.79e-21!5;UBERON:0004111!2.55e-18!241;UBERON:0000369!5.58e-18!4;UBERON:0002435!5.58e-18!4;UBERON:0000204!5.58e-18!4;UBERON:0010082!5.58e-18!4;UBERON:0000200!3.34e-17!6;UBERON:0002298!8.90e-17!8;UBERON:0003076!1.67e-15!15;UBERON:0003057!1.67e-15!15;UBERON:0000477!3.86e-15!286;UBERON:0000064!7.26e-15!219;UBERON:0005383!4.51e-14!3;UBERON:0005382!4.51e-14!3;UBERON:0001872!8.07e-14!5;UBERON:0000483!2.73e-13!309;UBERON:0002771!2.76e-13!3;UBERON:0000119!4.46e-13!312;UBERON:0006331!3.53e-12!3;UBERON:0001896!4.13e-12!3;UBERON:0005290!4.13e-12!3;UBERON:0010096!4.13e-12!3;UBERON:0000475!1.65e-11!365;UBERON:0004733!5.77e-11!12;UBERON:0002028!5.77e-11!12;UBERON:0007277!5.77e-11!12;UBERON:0004732!4.46e-10!13;UBERON:0001873!5.77e-10!2;UBERON:0010122!5.77e-10!2;UBERON:0001954!8.48e-10!2;UBERON:0003022!8.48e-10!2;UBERON:0002421!8.48e-10!2;UBERON:0002600!8.48e-10!2;UBERON:0001876!1.97e-09!2;UBERON:0001875!3.38e-09!2;UBERON:0006514!3.38e-09!2;UBERON:0002148!9.33e-09!2;UBERON:0009662!9.33e-09!2;UBERON:0000062!9.61e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000369;2.71e-53;4!UBERON:0002435;2.71e-53;4!UBERON:0000204;2.71e-53;4!UBERON:0002791;3.15e-53;32!UBERON:0001869;2.63e-51;32!UBERON:0003528;1.55e-47;34!UBERON:0002020;1.55e-47;34!UBERON:0009663;3.39e-47;7!UBERON:0001893;1.07e-41;34!UBERON:0005383;1.22e-40;3!UBERON:0005382;1.22e-40;3!UBERON:0002780;6.96e-38;41!UBERON:0001890;6.96e-38;41!UBERON:0002420;9.33e-37;9!UBERON:0000125;9.33e-37;9!UBERON:0007245;9.33e-37;9!UBERON:0002308;9.33e-37;9!UBERON:0010009;9.33e-37;9!UBERON:0010011;9.33e-37;9!UBERON:0000454;9.33e-37;9!UBERON:0002619;1.19e-27;22!UBERON:0001873;1.39e-27;2!UBERON:0001954;3.57e-27;2!UBERON:0003022;3.57e-27;2!UBERON:0002421;3.57e-27;2!UBERON:0002600;3.57e-27;2!UBERON:0000956;2.05e-24;25!UBERON:0000203;2.05e-24;25!UBERON:0000349;3.26e-24;5!UBERON:0000073;2.19e-21;53!UBERON:0002616;2.19e-21;53!UBERON:0001950;7.65e-16;20!UBERON:0000955;2.86e-15;68!UBERON:0001874;6.65e-15;1!UBERON:0001882;1.72e-14;1!UBERON:0002022;1.72e-14;1!UBERON:0003112;1.72e-14;1!UBERON:0011158;1.72e-14;1!UBERON:0003128;1.72e-14;1!UBERON:0005403;1.72e-14;1!UBERON:0001703;1.72e-14;1!UBERON:0002241;1.72e-14;1!UBERON:0001017;3.21e-14;75!UBERON:0001016;2.67e-13;83!UBERON:0002021;1.06e-11;5!UBERON:0001872;1.21e-11;5!UBERON:0001875;6.80e-08;2!UBERON:0006514;6.80e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002791,3.57e-56,32;UBERON:0001869,3.57e-56,32;UBERON:0000369,2.71e-53,4;UBERON:0002435,2.71e-53,4;UBERON:0000204,2.71e-53,4;UBERON:0010082,2.71e-53,4;UBERON:0003528,6.68e-53,34;UBERON:0002020,6.68e-53,34;UBERON:0001893,6.68e-53,34;UBERON:0009663,4.32e-47,7;UBERON:0002780,6.69e-44,41;UBERON:0001890,6.69e-44,41;UBERON:0003080,6.69e-44,41;UBERON:0006240,6.69e-44,41;UBERON:0005383,6.64e-41,3;UBERON:0005382,6.64e-41,3;UBERON:0001049,1.11e-37,56;UBERON:0005068,1.11e-37,56;UBERON:0006241,1.11e-37,56;UBERON:0007135,1.11e-37,56;UBERON:0002420,1.13e-36,9;UBERON:0000125,1.13e-36,9;UBERON:0007245,1.13e-36,9;UBERON:0002308,1.13e-36,9;UBERON:0010009,1.13e-36,9;UBERON:0010011,1.13e-36,9;UBERON:0000454,1.13e-36,9;UBERON:0000073,6.89e-34,53;UBERON:0002616,6.89e-34,53;UBERON:0003056,2.32e-29,61;UBERON:0001873,6.20e-28,2;UBERON:0010122,6.20e-28,2;UBERON:0002619,1.15e-27,22;UBERON:0001954,2.09e-27,2;UBERON:0003022,2.09e-27,2;UBERON:0002421,2.09e-27,2;UBERON:0002600,2.09e-27,2;UBERON:0000955,7.28e-26,68;UBERON:0006238,7.28e-26,68;UBERON:0001017,1.79e-25,81;UBERON:0003075,1.79e-25,82;UBERON:0007284,1.79e-25,82;UBERON:0000956,1.99e-24,25;UBERON:0000203,1.99e-24,25;UBERON:0002346,3.07e-24,86;UBERON:0000349,3.39e-24,5;UBERON:0001016,7.54e-23,89;UBERON:0010371,7.54e-20,104;UBERON:0010314,5.17e-18,132;UBERON:0001950,8.40e-16,20;UBERON:0001874,8.17e-15,1;UBERON:0003112,1.07e-14,1;UBERON:0011158,1.07e-14,1;UBERON:0003128,1.07e-14,1;UBERON:0001703,1.07e-14,1;UBERON:0002241,1.07e-14,1;UBERON:0004761,1.07e-14,1;UBERON:0009617,1.07e-14,1;UBERON:0002022,1.84e-14,1;UBERON:0001882,3.15e-14,1;UBERON:0005403,3.15e-14,1;UBERON:0007023,9.41e-13,114;UBERON:0002021,1.03e-11,5;UBERON:0011216,1.32e-11,223;UBERON:0001872,1.42e-11,5;UBERON:0004121,2.15e-11,171;UBERON:0000924,2.15e-11,171;UBERON:0006601,2.15e-11,171;UBERON:0000025,4.05e-10,192;UBERON:0005253,5.37e-08,2;UBERON:0001875,8.04e-08,2;UBERON:0006514,8.04e-08,2;UBERON:0004111,8.80e-08,240 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,1.77148277162768,2.53252521113357,0,0.110579259931225,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,1.49823746722733,0,0,0,0,0,1.33649024647654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.976210119215705,0.751145584238999,0.573409195690071,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02766760154335,1.41696576325585,0.319267718114302,0.41023272848151,4.53729053199093,0.691572524642179,1.61475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,0,1.03343398250592,0.570742291745161,2.18789923607288,0,0,0.879356221798103,0,0,0,0,0,0,0,0,0,0.591954962065642,0,0,0,2.04250266890802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0,1.2679671827502,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.407948941145488,2.18175345170189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,1.77148277162768,2.53252521113357,0,0.110579259931225,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,1.49823746722733,0,0,0,0,0,1.33649024647654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.976210119215705,0.751145584238999,0.573409195690071,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02766760154335,1.41696576325585,0.319267718114302,0.41023272848151,4.53729053199093,0.691572524642179,1.61475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,0,1.03343398250592,0.570742291745161,2.18789923607288,0,0,0.879356221798103,0,0,0,0,0,0,0,0,0,0.591954962065642,0,0,0,2.04250266890802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0,1.2679671827502,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.407948941145488,2.18175345170189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p17@CSMD1 | |||
}} | }} |
Latest revision as of 09:38, 18 September 2015
Short description: | p17@CSMD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_CSMD1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -112bp_to_ENST00000520002_5end |
EntrezGene: | CSMD1 |
HGNC: | 14026 |
UniProt: | E5RIG2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data