FFCP PHASE1:Hg19::chr16:431889..431903,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58986 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17205 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HCN3 | |||
|association_with_transcript=46bp_to_NM_021259,uc002cgu.3_5end | |||
|cluster_id=chr16:431889..431903,- | |||
|description=CAGE_peak_3_at_TMEM8A_5end | |||
|id=chr16:431889..431903,- | |||
|ontology_enrichment_celltype=CL:0000066!1.75e-20!254;CL:0002321!7.58e-14!248;CL:0000220!2.77e-13!246;CL:0000115!2.41e-07!35;CL:0002077!2.68e-07!33;CL:0000148!7.82e-07!10;CL:0000541!7.82e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000148;9.27e-09;10!CL:1000449;1.56e-08;15!CL:0002681;2.66e-08;12!CL:0002584;2.66e-08;12!CL:1000497;4.48e-07;17!CL:0002518;4.48e-07;17!CL:1000507;8.87e-07;10!CL:1000494;8.87e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.03e-15,253;CL:0002321,1.83e-13,250;CL:0000148,6.96e-09,10;CL:0000541,6.96e-09,10;CL:1000449,2.42e-08,15;CL:0002078,4.87e-08,45;CL:0002681,5.04e-08,12;CL:0002584,5.04e-08,12;CL:0000115,6.17e-08,36;CL:0002077,5.37e-07,34;CL:1000497,6.47e-07,17;CL:0002518,6.47e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.40e-09!118;UBERON:0001008!4.09e-09!45;UBERON:0006554!4.39e-09!44;UBERON:0000466!3.75e-08!126;UBERON:0000464!5.73e-08!104;UBERON:0000468!6.60e-08!659;UBERON:0002553!9.46e-08!70;UBERON:0002113!1.22e-07!27;UBERON:0003918!1.22e-07!27;UBERON:0005095!1.22e-07!27;UBERON:0007687!1.22e-07!27;UBERON:0000055!2.09e-07!69;UBERON:0000080!2.67e-07!18;UBERON:0002120!2.67e-07!18;UBERON:0004875!2.67e-07!18;UBERON:0005721!2.67e-07!18;UBERON:0005754!2.67e-07!18;UBERON:0007297!2.67e-07!18;UBERON:0006555!3.05e-07!17;UBERON:0005103!3.05e-07!17;UBERON:0000083!3.05e-07!17;UBERON:0009201!3.05e-07!17;UBERON:0004819!3.05e-07!17;UBERON:0006553!3.05e-07!17;UBERON:0003074!3.05e-07!17;UBERON:0003060!3.05e-07!17;UBERON:0000467!4.41e-07!625;UBERON:0000480!5.28e-07!626;UBERON:0001637!5.78e-07!42;UBERON:0003509!5.78e-07!42;UBERON:0004572!5.78e-07!42;UBERON:0009569!6.84e-07!113;UBERON:0001981!7.73e-07!60;UBERON:0007500!7.73e-07!60;UBERON:0004537!7.73e-07!60;UBERON:0006965!7.73e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;4.97e-10;30!UBERON:0001008;4.97e-10;30!UBERON:0002113;9.63e-09;24!UBERON:0011143;9.63e-09;24!UBERON:0006555;1.56e-08;15!UBERON:0000353;1.56e-08;15!UBERON:0004819;1.56e-08;15!UBERON:0001285;1.56e-08;15!UBERON:0007684;1.56e-08;15!UBERON:0001225;2.66e-08;12!UBERON:0008987;2.66e-08;12!UBERON:0001851;3.03e-08;15!UBERON:0003914;3.14e-07;74!UBERON:0004211;8.87e-07;10!UBERON:0009773;8.87e-07;10!UBERON:0001231;8.87e-07;10!UBERON:0004810;8.87e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006554,1.38e-10,47;UBERON:0001008,3.62e-10,48;UBERON:0003914,1.21e-09,117;UBERON:0006555,2.87e-09,16;UBERON:0004819,2.87e-09,16;UBERON:0002113,5.42e-09,26;UBERON:0003918,5.42e-09,26;UBERON:0011143,5.42e-09,26;UBERON:0005095,5.42e-09,26;UBERON:0007687,5.42e-09,26;UBERON:0000055,1.89e-08,68;UBERON:0000353,2.04e-08,15;UBERON:0004211,2.42e-08,15;UBERON:0009773,2.42e-08,15;UBERON:0001231,2.42e-08,15;UBERON:0001285,2.42e-08,15;UBERON:0007684,2.42e-08,15;UBERON:0004208,2.42e-08,15;UBERON:0009569,3.41e-08,112;UBERON:0001225,5.04e-08,12;UBERON:0008987,5.04e-08,12;UBERON:0001851,5.80e-08,15;UBERON:0002417,1.66e-07,60;UBERON:0000916,1.66e-07,60;UBERON:0007500,2.16e-07,59;UBERON:0001981,2.16e-07,59;UBERON:0004537,2.16e-07,59;UBERON:0006965,2.16e-07,59;UBERON:0005172,3.32e-07,54;UBERON:0005173,3.32e-07,54;UBERON:0002100,3.70e-07,199;UBERON:0001637,8.24e-07,42;UBERON:0003509,8.24e-07,42;UBERON:0004572,8.24e-07,42 | |||
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| |||
|short_description=p3@TMEM8A | |||
}} |
Latest revision as of 16:00, 16 September 2015
Short description: | p3@TMEM8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEM8A_5end |
Coexpression cluster: | NA |
Association with transcript: | 46bp_to_NM_021259, uc002cgu.3_5end |
EntrezGene: | TMEM8A |
HGNC: | 17205 |
UniProt: | Q9HCN3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.03e-15 | 253 |
embryonic cell | 1.83e-13 | 250 |
melanocyte | 6.96e-09 | 10 |
melanoblast | 6.96e-09 | 10 |
epithelial cell of nephron | 2.42e-08 | 15 |
meso-epithelial cell | 4.87e-08 | 45 |
kidney cortical cell | 5.04e-08 | 12 |
renal cortical epithelial cell | 5.04e-08 | 12 |
endothelial cell | 6.17e-08 | 36 |
ecto-epithelial cell | 5.37e-07 | 34 |
kidney cell | 6.47e-07 | 17 |
kidney epithelial cell | 6.47e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
urinary system structure | 1.38e-10 | 47 |
renal system | 3.62e-10 | 48 |
epithelial tube | 1.21e-09 | 117 |
excretory tube | 2.87e-09 | 16 |
kidney epithelium | 2.87e-09 | 16 |
kidney | 5.42e-09 | 26 |
kidney mesenchyme | 5.42e-09 | 26 |
upper urinary tract | 5.42e-09 | 26 |
kidney rudiment | 5.42e-09 | 26 |
kidney field | 5.42e-09 | 26 |
vessel | 1.89e-08 | 68 |
parenchyma | 2.04e-08 | 15 |
nephron epithelium | 2.42e-08 | 15 |
renal tubule | 2.42e-08 | 15 |
nephron tubule | 2.42e-08 | 15 |
nephron | 2.42e-08 | 15 |
uriniferous tubule | 2.42e-08 | 15 |
nephrogenic mesenchyme | 2.42e-08 | 15 |
subdivision of trunk | 3.41e-08 | 112 |
cortex of kidney | 5.04e-08 | 12 |
renal parenchyma | 5.04e-08 | 12 |
cortex | 5.80e-08 | 15 |
abdominal segment of trunk | 1.66e-07 | 60 |
abdomen | 1.66e-07 | 60 |
epithelial tube open at both ends | 2.16e-07 | 59 |
blood vessel | 2.16e-07 | 59 |
blood vasculature | 2.16e-07 | 59 |
vascular cord | 2.16e-07 | 59 |
abdomen element | 3.32e-07 | 54 |
abdominal segment element | 3.32e-07 | 54 |
trunk | 3.70e-07 | 199 |
artery | 8.24e-07 | 42 |
arterial blood vessel | 8.24e-07 | 42 |
arterial system | 8.24e-07 | 42 |