FFCP PHASE1:Hg19::chr16:2042483..2042536,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:2042483..2042536,+ | |||
|description=CAGE_peak_at_chr16:2042483..2042536,+ | |||
|id=chr16:2042483..2042536,+ | |||
|ontology_enrichment_celltype=CL:1000449!9.56e-09!16;CL:0000075!3.40e-08!27;CL:0000144!1.93e-07!625;CL:0002321!4.33e-07!248;CL:0000055!4.96e-07!180;CL:1000507!5.84e-07!12;CL:1000494!5.84e-07!12;CL:1000497!5.93e-07!18;CL:0002518!5.93e-07!18;CL:0002681!7.60e-07!13;CL:0002584!7.60e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:1000449;2.46e-11;15!CL:1000507;4.00e-10;10!CL:1000494;4.00e-10;10!CL:1000497;1.33e-09;17!CL:0002518;1.33e-09;17!CL:0002322;6.13e-09;5!CL:0002681;6.99e-08;12!CL:0002584;6.99e-08;12!CL:0000039;1.12e-07;7!CL:0000586;1.12e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,2.88e-11,15;CL:1000507,4.11e-10,10;CL:1000494,4.11e-10,10;CL:1000497,1.51e-09,17;CL:0002518,1.51e-09,17;CL:0002322,6.40e-09,5;CL:0000039,6.99e-08,7;CL:0000586,6.99e-08,7;CL:0002681,7.31e-08,12;CL:0002584,7.31e-08,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004211!9.56e-09!16;UBERON:0001285!9.56e-09!16;UBERON:0007684!9.56e-09!16;UBERON:0003220!9.56e-09!16;UBERON:0004208!9.56e-09!16;UBERON:0006555!8.68e-08!17;UBERON:0005103!8.68e-08!17;UBERON:0000083!8.68e-08!17;UBERON:0009201!8.68e-08!17;UBERON:0004819!8.68e-08!17;UBERON:0006553!8.68e-08!17;UBERON:0003074!8.68e-08!17;UBERON:0003060!8.68e-08!17;UBERON:0009773!5.84e-07!12;UBERON:0001231!5.84e-07!12;UBERON:0004810!5.84e-07!12;UBERON:0000080!5.93e-07!18;UBERON:0002120!5.93e-07!18;UBERON:0004875!5.93e-07!18;UBERON:0005721!5.93e-07!18;UBERON:0005754!5.93e-07!18;UBERON:0007297!5.93e-07!18;UBERON:0001225!7.60e-07!13;UBERON:0008987!7.60e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.46e-11;15!UBERON:0004819;2.46e-11;15!UBERON:0001285;2.46e-11;15!UBERON:0007684;2.46e-11;15!UBERON:0004211;4.00e-10;10!UBERON:0009773;4.00e-10;10!UBERON:0001231;4.00e-10;10!UBERON:0004810;4.00e-10;10!UBERON:0000473;5.89e-09;8!UBERON:0000353;1.16e-08;15!UBERON:0001225;6.99e-08;12!UBERON:0008987;6.99e-08;12!UBERON:0001851;1.80e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,2.88e-11,15;UBERON:0009773,2.88e-11,15;UBERON:0001231,2.88e-11,15;UBERON:0001285,2.88e-11,15;UBERON:0007684,2.88e-11,15;UBERON:0004208,2.88e-11,15;UBERON:0006555,2.37e-10,16;UBERON:0004819,2.37e-10,16;UBERON:0004810,4.11e-10,10;UBERON:0000473,4.57e-09,8;UBERON:0000353,1.07e-08,15;UBERON:0001225,7.31e-08,12;UBERON:0008987,7.31e-08,12;UBERON:0001851,1.82e-07,15 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.422863212287913,1.0007329835313,0.893922188854576,0,0,0.631719873426831,0,1.47440361900905,2.09340350391728,1.09220686065086,1.05506791291381,0.618831764800233,2.31978163009541,0,1.20538905604795,0.730310090387373,0,1.60057375499824,1.63200552995402,5.64218498660558,1.14494394852423,1.36874425072884,1.88313959392204,0.305653622991805,0.246301768349837,0.236132343941038,0,0,0.154816123316076,0,0.30120591877825,0,2.01414721508784,0.995184627411951,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0.112328631146495,0,0,0.285012743741249,0,0,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0.390178042679635,0.822189523018381,0.552700035571697,0.579606171470105,0.14828656316206,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,1.15076305659177,0,0,1.15877215168659,0,1.94653948121054,0.756278537312543,1.33037638477538,0.790513071238134,0.916853528483988,3.27865759463288,0,0.324547393654683,0,1.32957960518865,0,0,0,0.79504962946682,0.860234595106124,0,1.13061588384802,1.25849830862972,0.825354125820202,0.417989933073621,0.258416759169329,0.71153252537342,0,0,0,0.976248230192678,0,3.24056779152704,0.17859945656816,0.22452937262617,0.225222960966644,1.53316637465883,2.84779697870439,0.183201743930407,0,0,3.05265836499774,0.496971951695318,0.506522046658319,0.264818361626438,0.573673241497627,0,2.24271040056923,0,1.72667283892012,0.622422070799533,0.404132016209064,0.326923806226917,0.302714855289863,2.30470369792,0.70296429550139,0.624320153660641,0,0.298897361103602,0.704606991862589,0.647491777472526,0.702254033511242,0,1.71968044236475,0.516628905878827,0,0,0,1.43723628363248,0.505008341862199,1.25118519871964,0,0.438977620880838,0,0.300476117813194,0.453728732640084,0,0.427114777637135,0.635795703478686,0,0.103052529238439,0,0,0.168776332241266,0.292311015483596,0,0.184099797284599,0.969876340912871,0,0,0.847802961552438,0,0.272746120590835,0,18.7839507439577,19.8794652482228,17.1967035446887,11.6100381617215,16.4008553069158,0,0,0,0,0,2.16563844500876,0,0,0,0,0,0,0,0,0,1.4763109092493,1.40241773803446,1.2347220339942,1.47008711385542,0,0,0,0,0,0.514703430895577,0.109750285408626,1.1240175325762,0.201057944823262,4.72201070308501,0,2.07986957055916,1.44331342025273,1.04337364477569,1.05667824812239,1.87676382089396,0,0.951270761172991,0,0,0,0,0,0,0,0.425325291727159,0.268675568108545,0,0,0,0,0,0,0.25248486685276,0.63497894292169,0.381988425558278,2.34434894420094,0,0.514137463516618,0.600686115687835,0.571652865261156,0.448524337381443,0,0.51336800074665,1.03417372606222,3.57656445851882,0,0.26593811658487,0,1.28603687131071,8.5109479213967,1.0656887160644,1.71573592389777,0.542621605391443,2.46972101034231,0,3.55391948742546,0.791951872933429,0.301439377059586,0,0.399891964728228,0,0,0,0.479249710983165,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0.112085143993527,0,0,0,0.76228387266739,0,0.773288812777695,0.670065061337395,1.91381625495949,0,0,0,1.47229790062968,1.50051156317903,0.813795071099207,0.415941723061614,0.356857977594324,1.26161932027148,0.702848489956279,1.20378439891088,0,1.03473071292505,0.664225598535437,1.29058417979192,0.434418072340414,3.72022199179207,1.37257369524342,0,0,0.320182673410333,3.94065842880137,1.66435439510497,1.5119514666484,0,0,0.561320188866147,0.256278298511402,0,0.64341568457443,0,0,0.177561725313127,0.164254312027618,0,0,0.120859449591622,0,0.184161977871793,0.114814448164607,0.182091168006717,0.917870904715969,7.21919380651859,1.92538342761037,7.84349769176855,4.38417673959782,2.11103257785751,2.27466768141793,0.510281115829547,0.431831832204279,3.08454505380579,1.89662506280697,2.00675909541941,1.01950509218015,0.831076008928724,2.0148727924996,0,0,1.28225062558195,0.328014645699706,0.325378394664303,0,0.732555718546747,0.660075999364704,1.72279661398852,0,1.6068392984416,0.773365746336976,0.308097234229289,0.767518373630648,0.964856007391714,0.214840489736547,0.580066775656914,0.511359764496605,0.801288320820636,0.165284915360978,0,0.255225424989168,0.10115778085555,0.464845549297286,0,0,1.23213432070436,0,0.869932992075073,1.48259375283136,0.429374660225974,0.372158369359667,0.632758849437452,0.38126038784765,1.02359116524534,0.42793898803392,2.86382923133343,0,0.179872457583315,0.274537029736055,0.471249609382746,0.404364963146632,0,0,1.46290121726877,1.46228093778771,0,0.136499911407986,0.282810863907425,2.26016233240486,0,0.66343897524122,1.75380354101505,0.578775534266688,2.62357900818653,0.608731130888112,1.239293992399,0.563391205064483,0.286822704408103,1.27723753317057,0,0,0.211107635297664,0.329294892959902,1.89736586882858,1.74967360122491,0.962221127255121,0.670302275535787,2.17781969722645,0.0941438007767792,1.29151611801369,0,0.443430153536676,0,0,0,0,0.238231775457789,0,0,0.540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| |||
|short_description=p@chr16:2042483..2042536,+ | |||
}} |
Latest revision as of 06:58, 25 July 2015
Short description: | p@chr16:2042483..2042536, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:2042483..2042536, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 2.88e-11 | 15 |
kidney tubule cell | 4.11e-10 | 10 |
nephron tubule epithelial cell | 4.11e-10 | 10 |
kidney cell | 1.51e-09 | 17 |
kidney epithelial cell | 1.51e-09 | 17 |
embryonic stem cell | 6.40e-09 | 5 |
germ line cell | 6.99e-08 | 7 |
germ cell | 6.99e-08 | 7 |
kidney cortical cell | 7.31e-08 | 12 |
renal cortical epithelial cell | 7.31e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 2.88e-11 | 15 |
renal tubule | 2.88e-11 | 15 |
nephron tubule | 2.88e-11 | 15 |
nephron | 2.88e-11 | 15 |
uriniferous tubule | 2.88e-11 | 15 |
nephrogenic mesenchyme | 2.88e-11 | 15 |
excretory tube | 2.37e-10 | 16 |
kidney epithelium | 2.37e-10 | 16 |
nephron tubule epithelium | 4.11e-10 | 10 |
testis | 4.57e-09 | 8 |
parenchyma | 1.07e-08 | 15 |
cortex of kidney | 7.31e-08 | 12 |
renal parenchyma | 7.31e-08 | 12 |
cortex | 1.82e-07 | 15 |