FFCP PHASE1:Hg19::chr15:50149374..50149385,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:50149374..50149385,+ | |||
|description=CAGE_peak_at_chr15:50149374..50149385,+ | |||
|id=chr15:50149374..50149385,+ | |||
|ontology_enrichment_celltype=CL:0002504!5.47e-14!3;CL:1000279!5.47e-14!3;CL:1000280!5.47e-14!3;CL:0002195!1.04e-09!2;CL:0002571!1.04e-09!2;CL:0000055!2.26e-08!180;CL:0002334!2.30e-08!12;CL:0000048!3.91e-08!430;CL:0000680!4.37e-08!57;CL:0000056!4.37e-08!57;CL:0000355!4.37e-08!57;CL:0000723!6.73e-08!436;CL:0000034!1.36e-07!444;CL:0000187!3.24e-07!54;CL:0000188!4.20e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002504;2.20e-25;3!CL:1000279;2.20e-25;3!CL:1000280;2.20e-25;3!CL:0000511;1.42e-19;1!CL:0002625;1.42e-19;1!CL:0000216;1.42e-19;1!CL:1000487;1.57e-10;2!CL:0002195;2.72e-10;2!CL:0002571;2.72e-10;2!CL:0000135;2.79e-07;3!CL:0002579;2.79e-07;3!CL:0002590;2.79e-07;3!CL:0002622;2.79e-07;3!CL:0000388;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,2.34e-25,3;CL:1000279,2.34e-25,3;CL:1000280,2.34e-25,3;CL:0000511,1.30e-19,1;CL:0002625,1.30e-19,1;CL:0000216,1.30e-19,1;CL:1000487,1.57e-10,2;CL:0002195,2.72e-10,2;CL:0002571,2.72e-10,2;CL:0002590,2.47e-07,3;CL:0002622,2.63e-07,3;CL:0000135,2.97e-07,3;CL:0000388,2.97e-07,3;CL:0002579,3.35e-07,3;CL:0000192,4.02e-07,43;CL:0000514,4.02e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!2.13e-07!61;UBERON:0002036!2.13e-07!61;UBERON:0003082!2.13e-07!61;UBERON:0002385!4.34e-07!63;UBERON:0001015!4.34e-07!63;UBERON:0000383!4.34e-07!63;UBERON:0003688!8.59e-07!6;UBERON:0002358!8.59e-07!6;UBERON:0003684!8.59e-07!6;UBERON:0001178!8.59e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.42e-19;1!UBERON:0001343;1.42e-19;1!UBERON:0004910;1.42e-19;1!UBERON:0004813;1.42e-19;1!UBERON:0004909;1.80e-10;2!UBERON:0001155;4.00e-09;9!UBERON:0003101;4.61e-08;22!UBERON:0000079;4.61e-08;22!UBERON:0000059;1.26e-07;11!UBERON:0002367;1.51e-07;11!UBERON:0010147;1.51e-07;11!UBERON:0007846;2.79e-07;3!UBERON:0000043;2.79e-07;3!UBERON:0007845;2.79e-07;3!UBERON:0003937;5.47e-07;12!UBERON:0005399;5.47e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.30e-19,1;UBERON:0001343,1.30e-19,1;UBERON:0004910,1.30e-19,1;UBERON:0005154,1.30e-19,1;UBERON:0005295,1.30e-19,1;UBERON:0004813,1.30e-19,1;UBERON:0005297,1.30e-19,1;UBERON:0005294,1.30e-19,1;UBERON:0010141,1.30e-19,1;UBERON:0005891,1.30e-19,1;UBERON:0004122,1.42e-11,15;UBERON:0004909,1.72e-10,2;UBERON:0001155,4.09e-09,9;UBERON:0003101,4.44e-08,22;UBERON:0000079,4.44e-08,22;UBERON:0000059,1.28e-07,11;UBERON:0002367,1.46e-07,11;UBERON:0010147,1.46e-07,11;UBERON:0009846,1.46e-07,11;UBERON:0003353,1.46e-07,11;UBERON:0004902,1.46e-07,11;UBERON:0003820,1.46e-07,11;UBERON:0009847,1.46e-07,11;UBERON:0007846,2.97e-07,3;UBERON:0000043,2.97e-07,3;UBERON:0007845,2.97e-07,3;UBERON:0003937,5.31e-07,12;UBERON:0005399,5.31e-07,12;UBERON:0005256,5.90e-07,122 | |||
|phase1_expression=0.54503513781167,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.901428353439581,0,0,0,1.90738711043606,0,0,0,0,0,0,0,1.10459878370759,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.57191197463259,0,0.823240336780769,0,1.42156779497018,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992431231275107,0,0,0.256278298511402,1.02341449813341,0,0,0,0,0.164254312027618,0,0.116210378459959,0,0,0,1.83703117063371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21367859688319,0,0,0.307007349452259,0,0,0.290033387828457,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90630193923825,0,0,0.636406495851874,0,0.539617372749944,8.5106479218177,3.06312246098785,0,0,0,0,0.731140468893853,0,0,5.93902814205594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717149357331379,0,0,0,0,0,0,0.979762080328227,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0.554805861502613,0,0,0.889811221596536,0,0.756154618816195,0,0.147855149989634,0,0,0,0.414706207840855,0,0,0,0.380805212168795,0,0.363697318405119,0,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38652688589425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:50149374..50149385,+ | |||
}} |
Latest revision as of 02:14, 25 July 2015
Short description: | p@chr15:50149374..50149385, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:50149374..50149385, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 2.34e-25 | 3 |
smooth muscle cell of large intestine | 2.34e-25 | 3 |
smooth muscle cell of colon | 2.34e-25 | 3 |
androgen binding protein secreting cell | 1.30e-19 | 1 |
seminiferous tubule epithelial cell | 1.30e-19 | 1 |
Sertoli cell | 1.30e-19 | 1 |
smooth muscle cell of prostate | 1.57e-10 | 2 |
hepatic stem cell | 2.72e-10 | 2 |
hepatic mesenchymal stem cell | 2.72e-10 | 2 |
smooth muscle cell of the brain vasculature | 2.47e-07 | 3 |
prostate stromal cell | 2.63e-07 | 3 |
fibrocyte | 2.97e-07 | 3 |
tendon cell | 2.97e-07 | 3 |
omentum preadipocyte | 3.35e-07 | 3 |
smooth muscle cell | 4.02e-07 | 43 |
smooth muscle myoblast | 4.02e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.30e-19 | 1 |
seminiferous tubule of testis | 1.30e-19 | 1 |
epithelium of male gonad | 1.30e-19 | 1 |
epithelial cord | 1.30e-19 | 1 |
sex cord | 1.30e-19 | 1 |
seminiferous tubule epithelium | 1.30e-19 | 1 |
testis sex cord | 1.30e-19 | 1 |
genital ridge | 1.30e-19 | 1 |
primitive sex cord of indifferent gonad | 1.30e-19 | 1 |
coelomic epithelium | 1.30e-19 | 1 |
genitourinary system | 1.42e-11 | 15 |
epithelium of gonad | 1.72e-10 | 2 |
colon | 4.09e-09 | 9 |
male organism | 4.44e-08 | 22 |
male reproductive system | 4.44e-08 | 22 |
large intestine | 1.28e-07 | 11 |
prostate gland | 1.46e-07 | 11 |
male accessory sex gland | 1.46e-07 | 11 |
embryonic cloacal epithelium | 1.46e-07 | 11 |
epithelium of hindgut | 1.46e-07 | 11 |
urogenital sinus epithelium | 1.46e-07 | 11 |
prostate bud | 1.46e-07 | 11 |
prostate field | 1.46e-07 | 11 |
dense regular connective tissue | 2.97e-07 | 3 |
tendon | 2.97e-07 | 3 |
regular connective tissue | 2.97e-07 | 3 |
sex gland | 5.31e-07 | 12 |
male reproductive gland | 5.31e-07 | 12 |
trunk mesenchyme | 5.90e-07 | 122 |