FFCP PHASE1:Hg19::chr13:46425865..46425902,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283514 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30553 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IW03 | |||
|association_with_transcript=0bp_to_ENST00000400405_5end | |||
|cluster_id=chr13:46425865..46425902,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_SIAH3_5end | |||
|id=chr13:46425865..46425902,- | |||
|ontology_enrichment_celltype=CL:0002319!5.61e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.43e-09;25!CL:0000128;1.97e-08;7!CL:0000126;1.97e-08;7!CL:0000127;1.97e-08;7!CL:0000095;3.52e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.66e-09,25;CL:0000128,2.08e-08,7;CL:0000126,2.08e-08,7;CL:0000127,2.08e-08,7;CL:0002453,2.08e-08,7;CL:0000095,4.00e-07,17;CL:0000123,4.00e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.02e-12;82!UBERON:0006215;8.64e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.80e-44!86;UBERON:0000073!1.93e-43!94;UBERON:0001016!1.93e-43!94;UBERON:0001017!9.54e-42!82;UBERON:0001049!1.82e-41!57;UBERON:0005068!1.82e-41!57;UBERON:0006241!1.82e-41!57;UBERON:0007135!1.82e-41!57;UBERON:0002346!8.10e-39!90;UBERON:0003075!2.37e-36!86;UBERON:0007284!2.37e-36!86;UBERON:0000924!1.01e-34!173;UBERON:0006601!1.01e-34!173;UBERON:0000955!2.69e-34!69;UBERON:0006238!2.69e-34!69;UBERON:0002616!5.93e-34!59;UBERON:0004121!1.69e-32!169;UBERON:0007023!8.25e-32!115;UBERON:0002780!9.13e-31!41;UBERON:0001890!9.13e-31!41;UBERON:0006240!9.13e-31!41;UBERON:0002020!3.83e-30!34;UBERON:0003528!3.83e-30!34;UBERON:0000153!7.83e-30!129;UBERON:0007811!7.83e-30!129;UBERON:0001893!9.65e-30!34;UBERON:0003080!1.24e-29!42;UBERON:0001869!4.74e-29!32;UBERON:0000033!7.19e-29!123;UBERON:0002791!8.08e-29!33;UBERON:0003056!1.13e-27!61;UBERON:0000956!7.50e-23!25;UBERON:0000203!7.50e-23!25;UBERON:0002619!1.98e-20!22;UBERON:0001950!9.21e-19!20;UBERON:0003076!1.00e-12!15;UBERON:0003057!1.00e-12!15;UBERON:0000064!7.25e-12!219;UBERON:0004733!1.36e-10!12;UBERON:0002028!1.36e-10!12;UBERON:0007277!1.36e-10!12;UBERON:0004732!1.93e-09!13;UBERON:0000475!2.43e-09!365;UBERON:0000922!3.76e-09!612;UBERON:0002420!9.33e-09!9;UBERON:0007245!9.33e-09!9;UBERON:0010009!9.33e-09!9;UBERON:0010011!9.33e-09!9;UBERON:0000454!9.33e-09!9;UBERON:0002308!1.09e-08!9;UBERON:0000125!1.09e-08!9;UBERON:0002680!1.23e-08!9;UBERON:0001895!1.23e-08!9;UBERON:0010092!1.23e-08!9;UBERON:0000025!1.89e-08!194;UBERON:0002050!4.20e-08!605;UBERON:0005423!4.20e-08!605;UBERON:0000481!5.51e-08!347;UBERON:0000923!9.16e-08!604;UBERON:0005291!9.16e-08!604;UBERON:0006598!9.16e-08!604;UBERON:0002532!9.16e-08!604;UBERON:0000119!1.05e-07!312;UBERON:0000483!1.63e-07!309;UBERON:0000200!3.74e-07!6;UBERON:0009663!5.18e-07!7;UBERON:0001871!7.80e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.65e-48;32!UBERON:0003528;1.89e-46;34!UBERON:0002020;1.89e-46;34!UBERON:0002791;2.09e-45;32!UBERON:0001893;9.65e-44;34!UBERON:0000956;8.09e-42;25!UBERON:0000203;8.09e-42;25!UBERON:0002619;2.77e-37;22!UBERON:0002780;1.38e-35;41!UBERON:0001890;1.38e-35;41!UBERON:0000073;9.41e-35;53!UBERON:0002616;9.41e-35;53!UBERON:0001950;4.19e-34;20!UBERON:0000955;1.29e-27;68!UBERON:0001017;1.20e-26;75!UBERON:0001016;4.81e-25;83!UBERON:0004733;5.88e-14;12!UBERON:0002028;5.88e-14;12!UBERON:0002420;1.06e-12;9!UBERON:0007245;1.06e-12;9!UBERON:0010009;1.06e-12;9!UBERON:0010011;1.06e-12;9!UBERON:0000454;1.06e-12;9!UBERON:0004732;1.09e-12;13!UBERON:0000125;1.34e-12;9!UBERON:0002308;1.34e-12;9!UBERON:0002680;1.51e-12;9!UBERON:0001895;1.51e-12;9!UBERON:0000200;6.26e-12;6!UBERON:0001871;3.25e-10;6!UBERON:0002021;3.27e-10;5!UBERON:0001872;3.80e-10;5!UBERON:0000349;9.63e-10;5!UBERON:0009663;1.60e-09;7!UBERON:0011216;3.10e-09;132!UBERON:0007023;5.73e-09;114!UBERON:0000369;1.21e-08;4!UBERON:0002435;1.21e-08;4!UBERON:0000204;1.21e-08;4!UBERON:0002037;7.97e-08;6!UBERON:0002298;9.22e-08;6!UBERON:0005383;6.37e-07;3!UBERON:0005382;6.37e-07;3!UBERON:0001870;8.64e-07;3 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09305798730539,0.408001382488506,2.5076377718247,4.86601178122796,5.06435372769671,2.13422487311165,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0.293600439334847,0.553995408531877,0,0,0,0,0,0.145398238779565,0.377875943688809,0,0,0,0,0,0.512321413058201,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0.56738522469114,0.622822248995575,0,0,0.868755378820466,0,0,0.316462387440884,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,1.7703879310245,1.96505381374582,1.02800749499755,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,1.77943875794473,1.07016331235885,3.1360657141493,0,0,0,0.759059076058509,0,0.651083453856419,0.950452044448374,0.602300476311091,0.383959833463255,0,0,0,0.201606743224732,0.534880391567015,0.434473211648397,0,0,0,0,0,0.144846518960824,0,0,0.945348171640679,1.10864698731282,0.790513071238134,1.96468613246569,0,0.370784442784429,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.587172493218824,0.161872944368132,0.98315564691574,0,0,0.103325781175765,0,0,0,0,0.505008341862199,0.375355559615893,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0.573609190778008,0.243947412259191,0,0,0.10366105501537,0.504641701751257,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,1.40241773803446,0,0,0,0,1.18157981336281,0,0,0.171567810298526,0.98775256867763,0,0,0.370353780634118,0,0,0,1.62302566965108,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0.381988425558278,0,0,0,0,0.285826432630578,0.224262168690721,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.431255149719035,0.77005821767849,0.508189248444927,9.10978977003352,2.31986643833309,6.36561808270525,4.46557126157214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0,0,0,0.451199612907412,1.38627606787947,1.56869953835371,0,1.58327443339314,1.13733384070897,0,0.215915916102139,3.08454505380579,0,1.50506932156456,0.764628819135115,0,0.447749509444357,0.219259876645935,0.261435451024901,0.256450125116389,1.64007322849853,0.650756789328606,0,0.0915694648183434,0,0.574265537996172,1.30012049207304,0,0.096670718292122,0,0,0,0.214840489736547,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.952927101831156,0,0.648473311192717,0.540031437238115,0,0,0,0.245040215981032,0,0,0,0,0,0.766021480529467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.22961015263549,0,0,0,0,0,0,0,0,6.95903353436409,6.18945432206256,0,0,1.47787785689595,0.398495976502139,0.276283915531148,0,1.43176155503017,0,0,0,0,0,0,0,0,1.93866549219044,5.00947730073997,25.9497937401552,0,0,0,0,0,0,10.6870445704854,8.45653378811438,4.5142498682656,11.5146380155799,7.71817207202611,13.7323562685375,4.20201187738654,8.57088094965288,4.8264787373874,0,0,0.384751292518985,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,3.46221823587346,0.995261931078505,0,0.611030144933625,0,0,0,0.606610196826093,0,4.68528891450678,0,0.782658475728359,0,1.57833761139756,0,17.1400746513074,0.695052375913368,0,0,1.99396161812156,6.61983911750998,5.96472544973728,7.16834578637753,0,0,0.694238953340524,0,0,2.44617335538842,0,0,0,0,0.0969890164884194,0,1.58186518546373,0,0,7.7239171066172,0,0,0,0.999048047910651,0,0,0,0,0,0,0,0,0,0,4.20294202096853,1.50595916781192,0,0,0,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,6.36183751847443,4.08610218334727,0,0.137539436597234,0.83088067605837,0,0,8.74793615875555,0,1.10327990218877,2.36045646607491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.49841146896993,3.17358244182456,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,7.97461361970287,8.29778601333349,7.76183770380299,0.573409195690071,2.88415533995816,5.02980863825206,4.42715631795939,1.62474530350739,0,0,0,17.7967264206615,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0.385239660814607,0,0.260994291965212,0,0.463044948647668,0.97894681802587,0.537266523244462,0,0,0.353378291891762,0,0,0,0.345430341731199,0,7.74247242449692,0,0,0,0.982829546539238,0,0,0,0,0,0,0,0,0,7.80155664952275,0,13.9966688251748,0.54604819096007,3.90384818894258,0.637724760305049,3.71807292777007,16.2007026212241,0,0,1.60114149657094,0,0,7.32213166099639,8.5017945795351,4.62938191265739,5.12790910601888,22.4343809637329,8.29887029570615,6.9434527621696,0,0,0,0,0.115525666150338,0,0,0,0.82731361184183,0.20170506870352,0,0,0,0,7.02390880031304,6.24862478891078,7.44072467404263,6.84890750094194,18.0501686976012,0.548257766857182,0,0.351742488719241,0,0.535701835878287,2.69026977775059,0,0,0.177404740325278,0,2.22934412268644,7.4087008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| |||
|short_description=p1@SIAH3 | |||
}} |
Latest revision as of 12:32, 17 September 2015
Short description: | p1@SIAH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SIAH3_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000400405_5end |
EntrezGene: | SIAH3 |
HGNC: | 30553 |
UniProt: | Q8IW03 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.66e-09 | 25 |
oligodendrocyte | 2.08e-08 | 7 |
macroglial cell | 2.08e-08 | 7 |
astrocyte | 2.08e-08 | 7 |
oligodendrocyte precursor cell | 2.08e-08 | 7 |
neuron associated cell | 4.00e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 4.00e-07 | 17 |