FFCP PHASE1:Hg19::chr13:36944250..36944280,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23111 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18514 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=9bp_to_ENST00000494062_5end | |||
|cluster_id=chr13:36944250..36944280,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_8_at_SPG20_5end | |||
|id=chr13:36944250..36944280,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.87e-21;82!UBERON:0006241;7.95e-14;3!UBERON:0003057;7.95e-14;3!UBERON:0006215;1.43e-12;3!UBERON:0010122;1.49e-09;2!UBERON:0002532;1.90e-07;206!UBERON:0010316;1.90e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p8@SPG20 | |||
}} |
Latest revision as of 05:52, 17 September 2015
Short description: | p8@SPG20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SPG20_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 9bp_to_ENST00000494062_5end |
EntrezGene: | SPG20 |
HGNC: | 18514 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data