FFCP PHASE1:Hg19::chr11:6341724..6341760,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=112464 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9400 | |||
|TSSclassifier=strong | |||
|UniProt=Q969G5 | |||
|association_with_transcript=0bp_to_NM_145040,uc001mcu.1_5end | |||
|cluster_id=chr11:6341724..6341760,- | |||
|coexpression_cluster_id=C3181 | |||
|description=CAGE_peak_1_at_PRKCDBP_5end | |||
|id=chr11:6341724..6341760,- | |||
|ontology_enrichment_celltype=CL:0000055!1.67e-35!180;CL:0000222!7.34e-26!119;CL:0000183!1.66e-19!59;CL:0000220!4.52e-19!246;CL:0002321!7.46e-19!248;CL:0000680!8.19e-19!57;CL:0000056!8.19e-19!57;CL:0000355!8.19e-19!57;CL:0000187!2.72e-18!54;CL:0000057!4.60e-18!75;CL:0002371!1.03e-16!591;CL:0000192!2.11e-16!42;CL:0000514!2.11e-16!42;CL:0000393!1.03e-15!60;CL:0000211!1.03e-15!60;CL:0000144!1.69e-15!625;CL:0000359!8.41e-14!32;CL:0000548!1.07e-13!679;CL:0000004!1.07e-13!679;CL:0000255!1.07e-13!679;CL:0000012!5.62e-13!682;CL:0000115!3.00e-09!35;CL:0000213!3.61e-09!57;CL:0000215!3.61e-09!57;CL:0000071!1.80e-08!18;CL:0002546!1.80e-08!18;CL:0002078!2.09e-08!44;CL:0002494!3.69e-08!16;CL:0002139!4.00e-08!24;CL:0002620!4.85e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.38e-13;32!CL:0000192;5.26e-12;43!CL:0000187;2.55e-10;55!CL:0000134;2.71e-09;55!CL:0000071;1.58e-08;18!CL:0000393;2.01e-08;61!CL:0000211;2.01e-08;61!CL:0000723;2.67e-08;61!CL:0000115;3.00e-08;36!CL:0002494;3.24e-08;16!CL:0000048;3.47e-08;58!CL:0002139;3.54e-08;24!CL:0000057;1.52e-07;73!CL:0002620;4.30e-07;23!CL:0002320;4.95e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.09e-26,121;CL:0002321,6.46e-20,250;CL:0000680,5.61e-19,58;CL:0000056,5.61e-19,58;CL:0000355,5.61e-19,58;CL:0000187,1.90e-18,55;CL:0000057,2.12e-18,76;CL:0000192,1.63e-16,43;CL:0000514,1.63e-16,43;CL:0000393,7.01e-16,61;CL:0000211,7.01e-16,61;CL:0000359,6.53e-14,32;CL:0000115,1.05e-09,36;CL:0000213,1.26e-09,58;CL:0000215,1.26e-09,58;CL:0002078,6.43e-09,45;CL:0000071,1.56e-08,18;CL:0002546,1.56e-08,18;CL:0002494,3.22e-08,16;CL:0002139,3.49e-08,24;CL:0002620,4.32e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;5.26e-12;43!CL:0000355;3.00e-10;58!CL:0002546;1.58e-08;18!CL:0000222;5.84e-08;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.30e-27!84;UBERON:0000914!1.75e-23!83;UBERON:0002329!1.75e-23!83;UBERON:0003077!1.75e-23!83;UBERON:0003059!1.75e-23!83;UBERON:0007282!1.75e-23!83;UBERON:0009618!1.75e-23!83;UBERON:0007285!1.75e-23!83;UBERON:0002049!2.07e-23!79;UBERON:0007798!2.07e-23!79;UBERON:0001981!1.56e-22!60;UBERON:0007500!1.56e-22!60;UBERON:0004537!1.56e-22!60;UBERON:0006965!1.56e-22!60;UBERON:0000055!2.70e-22!69;UBERON:0004535!8.08e-22!110;UBERON:0003914!1.18e-21!118;UBERON:0001009!1.28e-21!113;UBERON:0004290!1.49e-20!70;UBERON:0000486!1.03e-19!82;UBERON:0005256!4.23e-19!143;UBERON:0001637!3.41e-18!42;UBERON:0003509!3.41e-18!42;UBERON:0004572!3.41e-18!42;UBERON:0001134!1.93e-17!61;UBERON:0002036!1.93e-17!61;UBERON:0003082!1.93e-17!61;UBERON:0002385!4.62e-17!63;UBERON:0001015!4.62e-17!63;UBERON:0000383!4.62e-17!63;UBERON:0000926!1.20e-14!448;UBERON:0004120!1.20e-14!448;UBERON:0006603!1.20e-14!448;UBERON:0000490!2.10e-14!138;UBERON:0004573!2.86e-14!33;UBERON:0004571!2.86e-14!33;UBERON:0002100!5.82e-14!216;UBERON:0000468!1.17e-12!659;UBERON:0003104!3.38e-12!238;UBERON:0009142!3.38e-12!238;UBERON:0000467!6.75e-12!625;UBERON:0000480!1.12e-11!626;UBERON:0000119!8.71e-10!312;UBERON:0000483!1.26e-09!309;UBERON:0003102!5.88e-09!95;UBERON:0000477!7.66e-09!286;UBERON:0000481!1.04e-08!347;UBERON:0001986!1.80e-08!18;UBERON:0004638!1.80e-08!18;UBERON:0004852!1.80e-08!18;UBERON:0000475!2.07e-08!365;UBERON:0000487!4.68e-08!22;UBERON:0006914!5.29e-08!25;UBERON:0000947!6.67e-08!21;UBERON:0010191!6.67e-08!21;UBERON:0002199!1.48e-07!45;UBERON:0002416!1.48e-07!45;UBERON:0000948!1.52e-07!24;UBERON:0005498!1.52e-07!24;UBERON:0004140!1.52e-07!24;UBERON:0009881!1.52e-07!24;UBERON:0004141!1.52e-07!24;UBERON:0003084!1.52e-07!24;UBERON:0007005!1.52e-07!24;UBERON:0004139!1.52e-07!24;UBERON:0004291!1.52e-07!24;UBERON:0002050!2.66e-07!605;UBERON:0005423!2.66e-07!605;UBERON:0000923!2.90e-07!604;UBERON:0005291!2.90e-07!604;UBERON:0006598!2.90e-07!604;UBERON:0002532!2.90e-07!604;UBERON:0000922!3.37e-07!612;UBERON:0007100!3.61e-07!27;UBERON:0000478!5.20e-07!24;UBERON:0003081!6.42e-07!216;UBERON:0004111!9.67e-07!241;UBERON:0001013!9.89e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.78e-13;42!UBERON:0003509;2.78e-13;42!UBERON:0004572;2.78e-13;42!UBERON:0004573;5.00e-13;33!UBERON:0004571;5.00e-13;33!UBERON:0007500;5.87e-13;56!UBERON:0001981;5.87e-13;56!UBERON:0004537;5.87e-13;56!UBERON:0003914;1.67e-11;74!UBERON:0000055;8.00e-11;65!UBERON:0002049;7.13e-10;75!UBERON:0007798;7.13e-10;75!UBERON:0004638;1.58e-08;18!UBERON:0001986;1.58e-08;18!UBERON:0004852;1.58e-08;18!UBERON:0006914;4.04e-08;25!UBERON:0000487;4.06e-08;22!UBERON:0000947;5.84e-08;21!UBERON:0010191;5.84e-08;21!UBERON:0000478;4.59e-07;24!UBERON:0002384;5.81e-07;198!UBERON:0004535;7.34e-07;109!UBERON:0000025;8.39e-07;93!UBERON:0001013;8.70e-07;14!UBERON:0000948;9.59e-07;22 | |||
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| |||
|short_description=p1@PRKCDBP | |||
}} |
Latest revision as of 23:51, 18 September 2015
Short description: | p1@PRKCDBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRKCDBP_5end |
Coexpression cluster: | C3181_Mesenchymal_Smooth_Hair_Aortic_Fibroblast_Hepatic_tridermal |
Association with transcript: | 0bp_to_NM_145040, uc001mcu.1_5end |
EntrezGene: | PRKCDBP |
HGNC: | 9400 |
UniProt: | Q969G5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.09e-26 | 121 |
embryonic cell | 6.46e-20 | 250 |
muscle precursor cell | 5.61e-19 | 58 |
myoblast | 5.61e-19 | 58 |
multi-potent skeletal muscle stem cell | 5.61e-19 | 58 |
muscle cell | 1.90e-18 | 55 |
fibroblast | 2.12e-18 | 76 |
smooth muscle cell | 1.63e-16 | 43 |
smooth muscle myoblast | 1.63e-16 | 43 |
electrically responsive cell | 7.01e-16 | 61 |
electrically active cell | 7.01e-16 | 61 |
vascular associated smooth muscle cell | 6.53e-14 | 32 |
endothelial cell | 1.05e-09 | 36 |
lining cell | 1.26e-09 | 58 |
barrier cell | 1.26e-09 | 58 |
meso-epithelial cell | 6.43e-09 | 45 |
blood vessel endothelial cell | 1.56e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.56e-08 | 18 |
cardiocyte | 3.22e-08 | 16 |
endothelial cell of vascular tree | 3.49e-08 | 24 |
skin fibroblast | 4.32e-07 | 23 |