FFCP PHASE1:Hg19::chr10:26097558..26097569,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:26097558..26097569,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_at_chr10:26097558..26097569,+ | |||
|id=chr10:26097558..26097569,+ | |||
|ontology_enrichment_celltype=CL:0002541!2.09e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002535;3.06e-12;2!CL:0002541;1.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.90e-12,2;CL:0002541,1.40e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.19e-45;2!UBERON:0006222;4.59e-23;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.20e-56!57;UBERON:0005068!7.20e-56!57;UBERON:0006241!7.20e-56!57;UBERON:0007135!7.20e-56!57;UBERON:0002020!2.84e-53!34;UBERON:0003528!2.84e-53!34;UBERON:0001869!3.62e-51!32;UBERON:0002616!8.48e-50!59;UBERON:0002780!3.06e-48!41;UBERON:0001890!3.06e-48!41;UBERON:0006240!3.06e-48!41;UBERON:0001893!5.68e-48!34;UBERON:0003080!5.37e-47!42;UBERON:0002791!1.74e-44!33;UBERON:0005743!2.60e-43!86;UBERON:0001017!1.52e-42!82;UBERON:0000955!4.12e-41!69;UBERON:0006238!4.12e-41!69;UBERON:0003075!7.42e-41!86;UBERON:0007284!7.42e-41!86;UBERON:0002346!9.22e-39!90;UBERON:0000073!1.20e-38!94;UBERON:0001016!1.20e-38!94;UBERON:0003056!4.38e-34!61;UBERON:0002308!1.03e-33!9;UBERON:0000125!1.03e-33!9;UBERON:0007023!1.32e-31!115;UBERON:0002619!5.56e-30!22;UBERON:0001950!3.82e-28!20;UBERON:0000956!3.34e-26!25;UBERON:0000203!3.34e-26!25;UBERON:0009663!4.51e-25!7;UBERON:0000153!6.76e-23!129;UBERON:0007811!6.76e-23!129;UBERON:0000033!1.78e-22!123;UBERON:0000369!1.99e-20!4;UBERON:0002435!1.99e-20!4;UBERON:0000204!1.99e-20!4;UBERON:0010082!1.99e-20!4;UBERON:0004121!2.52e-20!169;UBERON:0000924!1.06e-19!173;UBERON:0006601!1.06e-19!173;UBERON:0002420!2.32e-19!9;UBERON:0007245!2.32e-19!9;UBERON:0010009!2.32e-19!9;UBERON:0010011!2.32e-19!9;UBERON:0000454!2.32e-19!9;UBERON:0000200!1.55e-18!6;UBERON:0005383!8.52e-16!3;UBERON:0005382!8.52e-16!3;UBERON:0000988!2.12e-14!3;UBERON:0002298!5.98e-14!8;UBERON:0002771!8.28e-14!3;UBERON:0000025!2.64e-13!194;UBERON:0000064!3.39e-13!219;UBERON:0001873!4.35e-11!2;UBERON:0010122!4.35e-11!2;UBERON:0001875!1.09e-10!2;UBERON:0006514!1.09e-10!2;UBERON:0000483!1.09e-10!309;UBERON:0000119!1.62e-10!312;UBERON:0002148!1.74e-10!2;UBERON:0009662!1.74e-10!2;UBERON:0003076!2.74e-10!15;UBERON:0003057!2.74e-10!15;UBERON:0004111!1.78e-09!241;UBERON:0004733!3.22e-09!12;UBERON:0002028!3.22e-09!12;UBERON:0007277!3.22e-09!12;UBERON:0001871!6.04e-09!7;UBERON:0001872!8.31e-09!5;UBERON:0002021!9.01e-09!5;UBERON:0000477!1.72e-08!286;UBERON:0004732!1.73e-08!13;UBERON:0000476!2.09e-07!3;UBERON:0000920!2.09e-07!3;UBERON:0006331!2.94e-07!3;UBERON:0000475!3.63e-07!365;UBERON:0001896!8.54e-07!3;UBERON:0005290!8.54e-07!3;UBERON:0010096!8.54e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000369;1.46e-88;4!UBERON:0002435;1.46e-88;4!UBERON:0000204;1.46e-88;4!UBERON:0009663;8.90e-79;7!UBERON:0005383;5.00e-67;3!UBERON:0005382;5.00e-67;3!UBERON:0002420;2.13e-61;9!UBERON:0000125;2.13e-61;9!UBERON:0007245;2.13e-61;9!UBERON:0002308;2.13e-61;9!UBERON:0010009;2.13e-61;9!UBERON:0010011;2.13e-61;9!UBERON:0000454;2.13e-61;9!UBERON:0001873;3.19e-45;2!UBERON:0001874;1.07e-23;1!UBERON:0001882;2.10e-23;1!UBERON:0005403;2.10e-23;1!UBERON:0002791;2.09e-17;32!UBERON:0001869;2.89e-16;32!UBERON:0003528;4.05e-16;34!UBERON:0002020;4.05e-16;34!UBERON:0002780;3.16e-15;41!UBERON:0001890;3.16e-15;41!UBERON:0001893;2.41e-14;34!UBERON:0001875;2.32e-12;2!UBERON:0006514;2.32e-12;2!UBERON:0006955;3.06e-12;2!UBERON:0004801;3.06e-12;2!UBERON:0000955;6.44e-10;68!UBERON:0000073;5.22e-09;53!UBERON:0002616;5.22e-09;53!UBERON:0003124;1.35e-08;3!UBERON:0000920;1.35e-08;3!UBERON:0001017;2.23e-08;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.46e-88,4;UBERON:0002435,1.46e-88,4;UBERON:0000204,1.46e-88,4;UBERON:0010082,1.46e-88,4;UBERON:0009663,8.90e-79,7;UBERON:0005383,5.01e-67,3;UBERON:0005382,5.01e-67,3;UBERON:0002420,2.13e-61,9;UBERON:0000125,2.13e-61,9;UBERON:0007245,2.13e-61,9;UBERON:0002308,2.13e-61,9;UBERON:0010009,2.13e-61,9;UBERON:0010011,2.13e-61,9;UBERON:0000454,2.13e-61,9;UBERON:0001873,3.19e-45,2;UBERON:0010122,3.19e-45,2;UBERON:0001874,1.07e-23,1;UBERON:0001882,2.10e-23,1;UBERON:0005403,2.10e-23,1;UBERON:0002780,5.30e-19,41;UBERON:0001890,5.30e-19,41;UBERON:0003080,5.30e-19,41;UBERON:0006240,5.30e-19,41;UBERON:0002791,5.13e-17,32;UBERON:0001869,5.13e-17,32;UBERON:0003528,4.66e-16,34;UBERON:0002020,4.66e-16,34;UBERON:0001893,4.66e-16,34;UBERON:0000073,8.50e-15,53;UBERON:0002616,8.50e-15,53;UBERON:0001049,5.08e-14,56;UBERON:0005068,5.08e-14,56;UBERON:0006241,5.08e-14,56;UBERON:0007135,5.08e-14,56;UBERON:0003056,6.83e-13,61;UBERON:0001875,2.32e-12,2;UBERON:0006514,2.32e-12,2;UBERON:0006955,2.90e-12,2;UBERON:0004801,2.90e-12,2;UBERON:0000955,2.03e-11,68;UBERON:0006238,2.03e-11,68;UBERON:0001017,1.26e-09,81;UBERON:0003075,1.26e-09,82;UBERON:0007284,1.26e-09,82;UBERON:0002346,3.51e-09,86;UBERON:0001016,1.12e-08,89;UBERON:0000920,1.40e-08,3;UBERON:0010371,1.36e-07,104;UBERON:0007023,5.52e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,1.76352923497993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.20018970069687,14.9539583895506,0,0,0,0.219385397153973,0,0,0,0,1.1528195219403,0,0,0.638002319463839,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87411556580271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78952428069111,0,0.159633859057151,0.615349092722265,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0.261906694481422,0,0,0.270150338473579,0,0.826747186004736,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.263091094251396,0,0,0,21.2106046386603,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.930896962757057,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:26097558..26097569,+ | |||
}} |
Latest revision as of 12:48, 23 July 2015
Short description: | p@chr10:26097558..26097569, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:26097558..26097569, + |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.90e-12 | 2 |
chorionic membrane mesenchymal stem cell | 1.40e-08 | 3 |