FFCP PHASE1:Hg19::chr4:120549072..120549101,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:120549072..120549101,-
|short_description=p6@PDE5A
|description=CAGE_peak_6_at_PDE5A_5end
|association_with_transcript=-284bp_to_ENST00000264805_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8654 | |EntrezGene=8654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8784 | |HGNC=8784 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-284bp_to_ENST00000264805_5end | |||
|cluster_id=chr4:120549072..120549101,- | |||
|coexpression_cluster_id=C1271 | |||
|description=CAGE_peak_6_at_PDE5A_5end | |||
|id=chr4:120549072..120549101,- | |||
|ontology_enrichment_celltype=CL:0000057!4.91e-11!75;CL:0000055!1.76e-10!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.58e-08,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.18e-12!115;UBERON:0000481!8.34e-08!347;UBERON:0000475!1.90e-07!365;UBERON:0001007!9.62e-07!155;UBERON:0001555!9.62e-07!155;UBERON:0007026!9.62e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.82e-11;17!UBERON:0005409;1.43e-09;22!UBERON:0003101;2.57e-09;22!UBERON:0000079;2.57e-09;22!UBERON:0000059;3.19e-09;11!UBERON:0001155;7.86e-09;9!UBERON:0004921;4.05e-08;33!UBERON:0011135;1.80e-07;5!UBERON:0002216;1.80e-07;5!UBERON:0011134;1.80e-07;5!UBERON:0002209;1.80e-07;5!UBERON:0002213;1.80e-07;5!UBERON:0007844;1.80e-07;5!UBERON:0011138;1.80e-07;5!UBERON:0001130;1.80e-07;5!UBERON:0001066;1.80e-07;5!UBERON:0001468;1.80e-07;5!UBERON:0003937;7.89e-07;12!UBERON:0005399;7.89e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.30e-11,17;UBERON:0003101,2.65e-09,22;UBERON:0000079,2.65e-09,22;UBERON:0000059,3.36e-09,11;UBERON:0007023,4.05e-09,114;UBERON:0001155,8.46e-09,9;UBERON:0005409,3.98e-08,25;UBERON:0004797,5.97e-08,7;UBERON:0011135,7.89e-08,5;UBERON:0002216,7.89e-08,5;UBERON:0011134,7.89e-08,5;UBERON:0002209,7.89e-08,5;UBERON:0002213,7.89e-08,5;UBERON:0005856,7.89e-08,5;UBERON:0005866,7.89e-08,5;UBERON:0005863,7.89e-08,5;UBERON:0007844,7.89e-08,5;UBERON:0011138,7.89e-08,5;UBERON:0001130,7.89e-08,5;UBERON:0001066,7.89e-08,5;UBERON:0001468,7.89e-08,5;UBERON:0001046,9.74e-08,19;UBERON:0001007,1.12e-07,145;UBERON:0001555,1.12e-07,145;UBERON:0007026,1.12e-07,145;UBERON:0000162,4.10e-07,14;UBERON:0001353,4.10e-07,14;UBERON:0000163,4.10e-07,14;UBERON:0006866,4.10e-07,14;UBERON:0000164,4.10e-07,14;UBERON:0000931,4.10e-07,14;UBERON:0003937,8.37e-07,12;UBERON:0005399,8.37e-07,12 | |||
|phase1_expression=1.09007027562334,0.428201047781966,1.26858963686374,0,0.893922188854576,5.23403114460221,0,0,0,0,0.697801167972428,0.218441372130172,0,1.73272894144065,1.65698687863958,0,0,0.730310090387373,0,0,0.408001382488506,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,2.00535164254356,1.30361867064741,0,0,0,0,0,1.63723844372141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,1.01304409331664,0.926864265692532,2.86836620748814,2.83734705758686,1.12135520028461,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0.816616685019573,0.737005903870608,0.723280468230358,5.94001428641027,10.1379441004208,0,0.718618141816238,0.505008341862199,0.375355559615893,0.277064115484183,15.8031943517102,7.96868269077451,3.60571341375832,0.113432183160021,1.97328599257748,0.85422955527427,1.69545520927649,1.50045548042201,1.23663035086127,1.8034837803194,2.04728541964749,0.337552664482532,0.68205903612839,3.28163906517349,1.10459878370759,13.739914829599,2.13005755509969,0.906768884048762,0.508681776931463,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0.928735856063958,0.721879481669586,0,0.168584690078102,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,1.03993478527958,0,0,0.70445216541493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.25248486685276,0.063497894292169,0,0,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0.517086863031111,0,0,3.45719551560332,2.08014873822732,0.257207374262142,0,0,3.86040582876998,0,0,0,3.19852753868291,0,0,1.74306691720059,0,0,0,0,0.718874566474748,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31267027641678,4.50153468953709,1.89885516589815,2.28767947683888,0.892144943985809,0.315404830067869,1.05427273493442,0.601892199455438,0,0,0,0.184369168541703,1.21637060255316,0,0,0,0,0,0,0,0,0.744323423456331,1.2276957863045,1.96462066103151,2.05022638809122,1.02341449813341,1.12597744800525,1.48418066444991,0,0,0.0821271560138091,1.03850885836724,0,0,0,0,7.00368133804101,12.3821994244568,17.9640448494411,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.721287081534056,1.64825036673018,2.80532299729999,0,0,0,0,0,0.307007349452259,0,0,0.435050081742686,0,0.445160178233687,0,0,0,0,0,3.46293581513704,0,0.308033580176089,0.532306030317022,0.869932992075073,0,1.14499909393593,0.744316738719335,0,0.190630193923825,0,6.41908482050881,0.95460974377781,0.78494864019923,3.05783177891635,2.19629623788844,3.65218447271628,0,1.58510321173008,0,1.46290121726877,0.974853958525138,0,7.37099521603123,8.76713678113019,0,1.65409603063837,1.32687795048244,0.438450885253763,0.578775534266688,12.462000288886,0,0,0,0.430234056612155,0.0982490410131212,0,0.709522128141196,0,1.31717957183961,0.379473173765715,0,0,0,0,0.659006605437454,0,0,0,0,0.507447609232169,0,1.13929437434833,0.476463550915578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0,0,0,0,0.111308705022906,0,0,15.1428471070813,11.8802083678393,0,0.102268682502155,0,0.311039587661807,0.0898683511473268,0,0,4.24166644238815,0,0,0,0.278304294485554,0,0,0,2.17499872630438,0,0,0,0,0.291604613383254,0,0,0.361789315876224,0,0.442317039724898,0.295547618953547,1.09692698576986,0,1.25481369850743,4.92481654424301,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,5.97157158647103,3.18447232212021,7.33236173920351,0,0,0,0.134802265961354,0.802577647298789,0.234264445725339,0,0,0,6.70793484843964,2.41981432097328,0.30607276163049,10.2994124794435,0,0,0,0,0,0,0,0,0,0,0,4.89234671077684,0,0,0,0,6.59525312121252,0,1.12990370390266,0,0,0.189932387867636,0,0,2.34798294213288,0,0,0,0,0,0,0,0.135904206073614,0,14.3817486867214,0,0,0,0,1.71906176567983,0,4.18923601908381,13.5204650166893,2.15361907373044,0.199679000498991,0,0,0.671834724867263,0.720599767084807,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0.315222829196793,1.31136470337495,0,0,0,1.42939065274673,0,0,4.88699641578341,2.5926644736038,1.63293680054705,0,0,0,3.39936274560377,0.146552233678082,1.32506888912221,0,0,0,0,3.09683496446315,4.55892484789031,6.62782488555513,0.496166021811951,0,0,0,0,1.0027595760908,0.612691153526923,0.327872630709804,0,0,0,0,0,0,0.18628920882415,0,0.124980407962107,0,0,0.470531639396343,0,0,0,0,0,1.51522404220071,1.76097531226803,0.889811221596536,0.915360273587694,0.907385542579434,0.15543720058278,0,0,0,0,0,0,0.521745061811734,0.150257608997218,0,0,0.181848659202559,0.322231671127465,0,0.398095888698616,0,0.343395705182793,0,7.57109389371906,0,0,0,0.680117776536817,0.463044948647668,0.97894681802587,0.358177682162975,0,0.657852148736121,0.176689145945881,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3526759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| ||
|short_description=p6@PDE5A | |||
}} | }} |
Latest revision as of 22:58, 24 September 2015
Short description: | p6@PDE5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PDE5A_5end |
Coexpression cluster: | C1271_Prostate_sacrococcigeal_glioblastoma_penis_Fibroblast_Smooth_aorta |
Association with transcript: | -284bp_to_ENST00000264805_5end |
EntrezGene: | PDE5A |
HGNC: | 8784 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.58e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.30e-11 | 17 |
male organism | 2.65e-09 | 22 |
male reproductive system | 2.65e-09 | 22 |
large intestine | 3.36e-09 | 11 |
adult organism | 4.05e-09 | 114 |
colon | 8.46e-09 | 9 |
gastrointestinal system | 3.98e-08 | 25 |
blood vessel layer | 5.97e-08 | 7 |
intervertebral cartilage | 7.89e-08 | 5 |
symphysis | 7.89e-08 | 5 |
nonsynovial joint | 7.89e-08 | 5 |
fibrous joint | 7.89e-08 | 5 |
cartilaginous joint | 7.89e-08 | 5 |
developing mesenchymal condensation | 7.89e-08 | 5 |
pre-cartilage condensation | 7.89e-08 | 5 |
cartilaginous condensation | 7.89e-08 | 5 |
cartilage element | 7.89e-08 | 5 |
post-cranial axial skeletal system | 7.89e-08 | 5 |
vertebral column | 7.89e-08 | 5 |
intervertebral disk | 7.89e-08 | 5 |
intervertebral joint | 7.89e-08 | 5 |
hindgut | 9.74e-08 | 19 |
digestive system | 1.12e-07 | 145 |
digestive tract | 1.12e-07 | 145 |
primitive gut | 1.12e-07 | 145 |
cloaca | 4.10e-07 | 14 |
anal region | 4.10e-07 | 14 |
embryonic cloaca | 4.10e-07 | 14 |
terminal part of digestive tract | 4.10e-07 | 14 |
primitive urogenital sinus | 4.10e-07 | 14 |
proctodeum | 4.10e-07 | 14 |
sex gland | 8.37e-07 | 12 |
male reproductive gland | 8.37e-07 | 12 |