FFCP PHASE1:Hg19::chr3:69811858..69811881,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:69811858..69811881,+
|short_description=p5@MITF
|description=CAGE_peak_5_at_MITF_5end
|association_with_transcript=0bp_to_ENST00000433517_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4286 | |EntrezGene=4286 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7105 | |HGNC=7105 | ||
|TSSclassifier=strong | |||
|UniProt=C9J845 | |UniProt=C9J845 | ||
|association_with_transcript=0bp_to_ENST00000433517_5end | |||
|cluster_id=chr3:69811858..69811881,+ | |||
|description=CAGE_peak_5_at_MITF_5end | |||
|id=chr3:69811858..69811881,+ | |||
|ontology_enrichment_celltype=CL:0002194!2.78e-14!63;CL:0000576!2.78e-14!63;CL:0000040!2.78e-14!63;CL:0000559!2.78e-14!63;CL:0002009!1.77e-13!65;CL:0000839!1.10e-12!70;CL:0000860!2.27e-12!45;CL:0000557!2.43e-12!71;CL:0002057!7.04e-11!42;CL:0000766!9.10e-11!76;CL:1000497!4.60e-08!18;CL:0002518!4.60e-08!18;CL:1000507!9.62e-08!12;CL:1000494!9.62e-08!12;CL:0000066!2.48e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.20e-20;33!CL:0002057;4.20e-20;33!CL:1000507;1.05e-17;10!CL:1000494;1.05e-17;10!CL:0000473;1.64e-16;39!CL:0000234;1.64e-16;39!CL:1000497;1.91e-15;17!CL:0002518;1.91e-15;17!CL:1000449;2.73e-14;15!CL:0002166;2.90e-09;3!CL:0000576;1.38e-08;48!CL:0002681;3.01e-08;12!CL:0002584;3.01e-08;12!CL:0000766;2.76e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,3.60e-20,59;CL:0000576,3.60e-20,59;CL:0000040,3.60e-20,59;CL:0000559,3.60e-20,59;CL:0002009,2.62e-19,61;CL:0000839,4.30e-19,66;CL:0000557,1.03e-18,67;CL:1000507,1.23e-17,10;CL:1000494,1.23e-17,10;CL:0000473,1.47e-17,48;CL:0000234,1.47e-17,48;CL:0000766,5.69e-17,72;CL:0000860,2.03e-16,42;CL:0002057,2.03e-16,42;CL:1000497,2.10e-15,17;CL:0002518,2.10e-15,17;CL:1000449,3.01e-14,15;CL:0002031,2.52e-10,120;CL:0002087,4.46e-10,115;CL:0002166,2.10e-09,3;CL:0000763,2.89e-09,108;CL:0000049,2.89e-09,108;CL:0000738,2.45e-08,136;CL:0002681,3.21e-08,12;CL:0002584,3.21e-08,12 | |||
|ontology_enrichment_development_v019=CL:0002057;1.56e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;9.57e-10;3!DOID:127;9.57e-10;3!DOID:0060072;2.19e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,9.75e-10,3;DOID:127,9.75e-10,3;DOID:0060072,2.22e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002371!6.99e-14!80;UBERON:0004765!5.10e-12!101;UBERON:0001434!5.10e-12!101;UBERON:0001474!5.50e-12!86;UBERON:0000062!1.35e-11!511;UBERON:0003064!1.89e-11!37;UBERON:0002405!2.34e-09!115;UBERON:0002390!3.97e-09!102;UBERON:0003061!3.97e-09!102;UBERON:0001008!5.16e-09!45;UBERON:0002204!1.35e-08!167;UBERON:0006554!1.81e-08!44;UBERON:0000162!3.09e-08!14;UBERON:0001353!3.09e-08!14;UBERON:0000163!3.09e-08!14;UBERON:0006866!3.09e-08!14;UBERON:0000164!3.09e-08!14;UBERON:0000931!3.09e-08!14;UBERON:0002367!5.13e-08!11;UBERON:0010147!5.13e-08!11;UBERON:0009846!5.13e-08!11;UBERON:0003353!5.13e-08!11;UBERON:0004902!5.13e-08!11;UBERON:0003820!5.13e-08!11;UBERON:0009847!5.13e-08!11;UBERON:0009773!9.62e-08!12;UBERON:0001231!9.62e-08!12;UBERON:0004810!9.62e-08!12;UBERON:0001046!1.05e-07!19;UBERON:0004122!1.79e-07!15;UBERON:0002193!2.98e-07!112;UBERON:0003937!3.92e-07!12;UBERON:0005399!3.92e-07!12;UBERON:0000926!9.64e-07!448;UBERON:0004120!9.64e-07!448;UBERON:0006603!9.64e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.05e-17;10!UBERON:0009773;1.05e-17;10!UBERON:0001231;1.05e-17;10!UBERON:0004810;1.05e-17;10!UBERON:0006555;2.73e-14;15!UBERON:0004819;2.73e-14;15!UBERON:0001285;2.73e-14;15!UBERON:0007684;2.73e-14;15!UBERON:0002113;2.76e-10;24!UBERON:0011143;2.76e-10;24!UBERON:0001851;1.82e-08;15!UBERON:0001225;3.01e-08;12!UBERON:0008987;3.01e-08;12!UBERON:0000489;3.85e-08;29!UBERON:0006554;8.46e-08;30!UBERON:0001008;8.46e-08;30!UBERON:0001708;4.95e-07;4!UBERON:0008895;4.95e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004765,8.65e-21,90;UBERON:0002371,2.07e-20,76;UBERON:0001474,2.17e-18,82;UBERON:0001434,6.60e-18,100;UBERON:0004810,1.23e-17,10;UBERON:0002405,2.27e-15,93;UBERON:0004211,3.01e-14,15;UBERON:0009773,3.01e-14,15;UBERON:0001231,3.01e-14,15;UBERON:0001285,3.01e-14,15;UBERON:0007684,3.01e-14,15;UBERON:0004208,3.01e-14,15;UBERON:0002390,3.17e-14,98;UBERON:0003061,3.17e-14,98;UBERON:0006555,3.07e-13,16;UBERON:0004819,3.07e-13,16;UBERON:0002193,2.90e-12,108;UBERON:0002204,8.99e-11,167;UBERON:0006554,6.45e-10,47;UBERON:0001008,1.23e-09,48;UBERON:0002113,2.66e-09,26;UBERON:0003918,2.66e-09,26;UBERON:0011143,2.66e-09,26;UBERON:0005095,2.66e-09,26;UBERON:0007687,2.66e-09,26;UBERON:0001851,1.74e-08,15;UBERON:0001225,3.21e-08,12;UBERON:0008987,3.21e-08,12;UBERON:0000489,1.85e-07,31;UBERON:0001708,3.91e-07,4;UBERON:0008895,3.91e-07,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0.982935746006035,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,2.55671940596253,1.6446715520873,4.02618282163635,0.863077176966451,0.512321413058201,1.41889337933151,2.75796544589295,2.5819387343353,0,0.941211697713023,1.91034305040492,1.57306439111559,1.22433556948361,1.60464513538047,2.55734850319616,0,0,0,1.16083695451434,5.10646702222026,1.86846674698672,1.50749199154046,0.521482918420201,0.65156653411535,5.44859552370032,5.52416453981347,3.16462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44846518960824,0,0,0.283604451492204,0.665188192387692,0.702678285545008,0.0654895377488563,0,0,4.21911611751088,5.57215159357655,7.44564578905645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0.554128230968366,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0.18611685633159,0,0,0,0.0920498986422993,0.161646056818812,0,0,0.339121184620975,0.773043412653187,1.90922284413584,0.286804595389004,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.473227200159376,0.337169380156203,0,0.55146986366197,0.435758888184812,0.949082476444386,0.539325232640658,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.614942192715568,1.71567810298526,1.53650399572076,1.1240175325762,0.100528972411631,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0.246217006087397,3.7440682422278,0.743155811443641,2.81201501960331,4.36753533317035,2.69372684760534,0.895585227028483,0,0.766765358330422,1.97065295158377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0.868687840005475,0,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.630809660135739,0.702848489956279,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,1.20859449591622,0,0.0920809889358963,0.68888668898764,1.27463817604702,0.524497659837696,0.902399225814824,33.1165949548983,8.62784746094541,1.46139224653261,14.1439182716453,0,0,3.67057057373637,0,2.16757150035082,2.50844886927427,4.58777291481069,0,3.35812132083267,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0.192190067365106,0.127612712494584,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,2.33834194858309,0.823611089208164,0.824686816419805,0,0,0,0.48763373908959,0,0,2.04749867111979,0.424216295861138,0,0,0.66343897524122,0,0.578775534266688,0,0,0,0,0,0,0,1.77380532035299,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0.278406173895242,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,1.70749867179921,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.307801034015188,0.113942055847001,0,0,0,0.957003479195758,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,9.49491290376122,0.652931232636591,0.989471500037586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,1.42304773014896,0,0,0,0.0870592065804026,0,0,0.19351266257817,0.219267951258557,0.574808199372465,0,0,0,0.274083849293502,0,0,0,0.961905843018405,0,1.19885765749278,0,0,0,0,0.124252535565433,0,2.98989253361951,2.40586546518366,0.713987523454252,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0.360299883542404,5.82479747637269,0,0,0,0.590564889088493,1.86281330544726,0,0,0,0,0,0,0,0,0,0,0,1.16160370171347,0,0,0,0,0,5.42999601753713,4.32110745600634,4.57222304153173,0,0,0,0.226624183040251,0,0,0,0,0.171086837884329,0,0,0,0,0,2.76656284657122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499921631848426,0,0,0.235265819698172,0,0,0,0,0,0.378806010550178,0.50313580350515,2.66943366478961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0.800055529326307,0,0,0,1.73357847366573,0.214441591374926,0.260994291965212,0.226705925512272,0.926089897295336,0,0.358177682162975,0,0.219284049578707,0,0,0,8.71221163199019,0,0.607719912354764,0,0,0,0,0,0.245772908753719,3.38099397373803,0,0,1.54993481694734,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0.693153996902029,2.288292572803,0,0,0,11.0937787786936,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,1.15233987555779,0.171488009437418,0,0,9.81008879336936,1.4460082245969,0.078493092850514,0,1.40136081656895,0,6.47782773655864,0.47775168788705,0,0,0,0,0.801711364730253,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,2.47026410200984,0.481448200135009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0,1.9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| ||
|short_description=p5@MITF | |||
}} | }} |
Latest revision as of 12:07, 19 September 2015
Short description: | p5@MITF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MITF_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000433517_5end |
EntrezGene: | MITF |
HGNC: | 7105 |
UniProt: | C9J845 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 3.60e-20 | 59 |
monocyte | 3.60e-20 | 59 |
monoblast | 3.60e-20 | 59 |
promonocyte | 3.60e-20 | 59 |
macrophage dendritic cell progenitor | 2.62e-19 | 61 |
myeloid lineage restricted progenitor cell | 4.30e-19 | 66 |
granulocyte monocyte progenitor cell | 1.03e-18 | 67 |
kidney tubule cell | 1.23e-17 | 10 |
nephron tubule epithelial cell | 1.23e-17 | 10 |
defensive cell | 1.47e-17 | 48 |
phagocyte | 1.47e-17 | 48 |
myeloid leukocyte | 5.69e-17 | 72 |
classical monocyte | 2.03e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.03e-16 | 42 |
kidney cell | 2.10e-15 | 17 |
kidney epithelial cell | 2.10e-15 | 17 |
epithelial cell of nephron | 3.01e-14 | 15 |
hematopoietic lineage restricted progenitor cell | 2.52e-10 | 120 |
nongranular leukocyte | 4.46e-10 | 115 |
epithelial cell of Malassez | 2.10e-09 | 3 |
myeloid cell | 2.89e-09 | 108 |
common myeloid progenitor | 2.89e-09 | 108 |
leukocyte | 2.45e-08 | 136 |
kidney cortical cell | 3.21e-08 | 12 |
renal cortical epithelial cell | 3.21e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
skeletal element | 8.65e-21 | 90 |
bone marrow | 2.07e-20 | 76 |
bone element | 2.17e-18 | 82 |
skeletal system | 6.60e-18 | 100 |
nephron tubule epithelium | 1.23e-17 | 10 |
immune system | 2.27e-15 | 93 |
nephron epithelium | 3.01e-14 | 15 |
renal tubule | 3.01e-14 | 15 |
nephron tubule | 3.01e-14 | 15 |
nephron | 3.01e-14 | 15 |
uriniferous tubule | 3.01e-14 | 15 |
nephrogenic mesenchyme | 3.01e-14 | 15 |
hematopoietic system | 3.17e-14 | 98 |
blood island | 3.17e-14 | 98 |
excretory tube | 3.07e-13 | 16 |
kidney epithelium | 3.07e-13 | 16 |
hemolymphoid system | 2.90e-12 | 108 |
musculoskeletal system | 8.99e-11 | 167 |
urinary system structure | 6.45e-10 | 47 |
renal system | 1.23e-09 | 48 |
kidney | 2.66e-09 | 26 |
kidney mesenchyme | 2.66e-09 | 26 |
upper urinary tract | 2.66e-09 | 26 |
kidney rudiment | 2.66e-09 | 26 |
kidney field | 2.66e-09 | 26 |
cortex | 1.74e-08 | 15 |
cortex of kidney | 3.21e-08 | 12 |
renal parenchyma | 3.21e-08 | 12 |
cavitated compound organ | 1.85e-07 | 31 |
jaw skeleton | 3.91e-07 | 4 |
splanchnocranium | 3.91e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 9.75e-10 | 3 |
leiomyoma | 9.75e-10 | 3 |
benign neoplasm | 2.22e-07 | 4 |