FFCP PHASE1:Mm9::chr5:75098978..75098991,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16924 | |EntrezGene=16924 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=728 | |MCL_coexpression_id=728 | ||
|TSSclassifier=NA | |||
|UniProt=O70263 | |UniProt=O70263 | ||
|association_with_transcript=-42bp_to_ENSMUST00000117388_5end | |association_with_transcript=-42bp_to_ENSMUST00000117388_5end | ||
|cluster_id=chr5:75098978..75098991,- | |||
|description=CAGE_peak_4_at_Lnx1_5end | |description=CAGE_peak_4_at_Lnx1_5end | ||
|id=chr5:75098978..75098991,- | |id=chr5:75098978..75098991,- | ||
Latest revision as of 05:22, 26 September 2015
| Short description: | p4@Lnx1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Lnx1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:728 |
| Association with transcript: | -42bp_to_ENSMUST00000117388_5end |
| EntrezGene: | Lnx1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p4@Lnx1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| intestinal epithelial cell | 4.52e-13 | 9 |
| epithelial cell of alimentary canal | 4.52e-13 | 9 |
| brush border epithelial cell | 8.21e-12 | 6 |
| gut absorptive cell | 8.21e-12 | 6 |
| enterocyte | 8.21e-12 | 6 |
| columnar/cuboidal epithelial cell | 5.44e-10 | 7 |
| epithelial cell | 3.33e-07 | 25 |
| endo-epithelial cell | 3.40e-07 | 15 |
Showing 1 to 8 of 8 entries
| Ontology term | p-value | n |
|---|---|---|
| mucosa | 3.39e-19 | 15 |
| gastrointestinal system | 1.98e-18 | 47 |
| intestine | 7.35e-18 | 31 |
| intestinal mucosa | 2.00e-16 | 13 |
| wall of intestine | 2.00e-16 | 13 |
| gastrointestinal system mucosa | 2.00e-16 | 13 |
| epithelium of mucosa | 4.52e-13 | 9 |
| gastrointestinal system epithelium | 4.52e-13 | 9 |
| intestinal epithelium | 4.52e-13 | 9 |
| organ component layer | 1.20e-12 | 24 |
Showing 1 to 10 of 27 entries
