FFCP PHASE1:Hg19::chr3:168959838..168959856,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:168959838..168959856,+
|short_description=p@chr3:168959838..168959856,+
|description=CAGE_peak_at_chr3:168959838..168959856,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:168959838..168959856,+ | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_at_chr3:168959838..168959856,+ | |||
|id=chr3:168959838..168959856,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.75e-36!119;CL:0002139!1.75e-35!24;CL:0000115!5.57e-33!35;CL:0000213!1.82e-31!57;CL:0000215!1.82e-31!57;CL:0002078!5.71e-30!44;CL:0000071!4.01e-27!18;CL:0002546!4.01e-27!18;CL:0000220!9.24e-19!246;CL:0002321!2.01e-18!248;CL:1000413!1.44e-14!9;CL:0000359!2.24e-12!32;CL:0000076!9.82e-12!62;CL:0002544!2.61e-10!6;CL:0005020!7.08e-10!6;CL:0002138!7.08e-10!6;CL:0005022!7.08e-10!6;CL:0002543!1.26e-09!6;CL:0000192!4.92e-09!42;CL:0000514!4.92e-09!42;CL:0000680!2.96e-08!57;CL:0000056!2.96e-08!57;CL:0000355!2.96e-08!57;CL:0000183!4.30e-08!59;CL:0000187!1.82e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.47e-89;24!CL:0000071;5.06e-76;18!CL:0000115;5.24e-70;36!CL:1000413;2.83e-48;9!CL:0002078;2.60e-46;45!CL:0002544;7.09e-33;6!CL:0000213;1.24e-32;58!CL:0000215;1.24e-32;58!CL:0002144;3.53e-18;3!CL:0002138;1.53e-15;6!CL:0002543;3.67e-15;6!CL:0000076;1.03e-12;63!CL:0002545;5.16e-12;2!CL:0002188;8.25e-11;5!CL:0002618;1.51e-08;3!CL:1000746;7.54e-08;7!CL:1000612;7.54e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.80e-89,24;CL:0000115,5.02e-85,36;CL:0000071,7.10e-76,18;CL:0002546,7.10e-76,18;CL:0002078,5.09e-67,45;CL:0000213,7.20e-51,58;CL:0000215,7.20e-51,58;CL:1000413,4.28e-48,9;CL:0000222,5.42e-36,121;CL:0002544,8.76e-33,6;CL:0000076,3.06e-19,63;CL:0002144,4.35e-18,3;CL:0005020,1.28e-15,6;CL:0002138,1.28e-15,6;CL:0005022,1.28e-15,6;CL:0002321,1.91e-15,250;CL:0002543,3.13e-15,6;CL:0002545,5.49e-12,2;CL:0002188,7.49e-11,5;CL:0002618,2.51e-08,3;CL:1000746,7.05e-08,7;CL:1000612,7.05e-08,7;CL:0000066,9.45e-08,253 | |||
|ontology_enrichment_development_v019=CL:0002546;5.06e-76;18!CL:0005022;1.53e-15;6!CL:0000222;2.23e-12;121!UBERON:0005425;7.77e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;5.06e-76;18!UBERON:0001986;5.06e-76;18!UBERON:0004852;5.06e-76;18!UBERON:0000487;1.38e-61;22!UBERON:0006914;8.64e-54;25!UBERON:0003915;2.83e-48;9!UBERON:0004700;2.83e-48;9!UBERON:0001917;2.83e-48;9!UBERON:0000490;2.46e-37;33!UBERON:0007500;5.83e-27;56!UBERON:0001981;5.83e-27;56!UBERON:0004537;5.83e-27;56!UBERON:0000055;4.54e-26;65!UBERON:0000947;7.27e-20;21!UBERON:0010191;7.27e-20;21!UBERON:0001637;4.59e-19;42!UBERON:0003509;4.59e-19;42!UBERON:0004572;4.59e-19;42!UBERON:0010523;3.53e-18;3!UBERON:0001915;3.53e-18;3!UBERON:0001982;3.53e-18;3!UBERON:0003914;1.38e-17;74!UBERON:0004573;2.26e-17;33!UBERON:0004571;2.26e-17;33!UBERON:0002049;9.66e-16;75!UBERON:0007798;9.66e-16;75!UBERON:0001009;1.29e-12;112!UBERON:0005800;5.16e-12;2!UBERON:0001515;5.16e-12;2!UBERON:0001473;1.09e-11;8!UBERON:0004536;1.09e-11;8!UBERON:0006558;1.09e-11;8!UBERON:0000025;2.09e-11;93!UBERON:0004535;5.54e-11;109!UBERON:0001638;3.74e-10;9!UBERON:0003920;3.74e-10;9!UBERON:0004582;3.74e-10;9!UBERON:0002465;2.27e-09;10!UBERON:0004111;5.38e-08;130!UBERON:0000074;7.54e-08;7!UBERON:0001229;7.54e-08;7!UBERON:0007195;3.16e-07;1!UBERON:0000941;7.77e-07;1!UBERON:0001785;7.77e-07;1!UBERON:0002464;7.77e-07;1!UBERON:0004904;7.77e-07;1!UBERON:0001021;7.77e-07;1 | |||
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|short_description=p@chr3:168959838..168959856,+ | |||
}} | }} |
Latest revision as of 18:02, 29 July 2015
Short description: | p@chr3:168959838..168959856, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:168959838..168959856, + |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.80e-89 | 24 |
endothelial cell | 5.02e-85 | 36 |
blood vessel endothelial cell | 7.10e-76 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.10e-76 | 18 |
meso-epithelial cell | 5.09e-67 | 45 |
lining cell | 7.20e-51 | 58 |
barrier cell | 7.20e-51 | 58 |
endothelial cell of artery | 4.28e-48 | 9 |
mesodermal cell | 5.42e-36 | 121 |
aortic endothelial cell | 8.76e-33 | 6 |
squamous epithelial cell | 3.06e-19 | 63 |
capillary endothelial cell | 4.35e-18 | 3 |
lymphangioblast | 1.28e-15 | 6 |
endothelial cell of lymphatic vessel | 1.28e-15 | 6 |
vascular lymphangioblast | 1.28e-15 | 6 |
embryonic cell | 1.91e-15 | 250 |
vein endothelial cell | 3.13e-15 | 6 |
thoracic aorta endothelial cell | 5.49e-12 | 2 |
glomerular endothelial cell | 7.49e-11 | 5 |
endothelial cell of umbilical vein | 2.51e-08 | 3 |
glomerular cell | 7.05e-08 | 7 |
kidney corpuscule cell | 7.05e-08 | 7 |
epithelial cell | 9.45e-08 | 253 |