FFCP PHASE1:Hg19::chr3:123518704..123518728,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:123518704..123518728,-
|short_description=p28@MYLK
|description=CAGE_peak_28_at_MYLK_5end
|association_with_transcript=306bp_to_ENST00000360367,ENST0000050...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4638 | |EntrezGene=4638 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7590 | |HGNC=7590 | ||
|TSSclassifier=strong | |||
|UniProt=Q06S79 | |UniProt=Q06S79 | ||
|association_with_transcript=306bp_to_ENST00000360367,ENST00000506361,uc010hrs.1_5end | |||
|cluster_id=chr3:123518704..123518728,- | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_28_at_MYLK_5end | |||
|id=chr3:123518704..123518728,- | |||
|ontology_enrichment_celltype=CL:0002620!1.74e-11!23;CL:0000057!2.01e-08!75 | |||
|ontology_enrichment_celltype_v019=CL:0002622;5.00e-23;3!CL:0002600;1.14e-15;2!CL:0002620;4.80e-15;23!CL:0002580;4.88e-11;3!CL:0002615;9.33e-11;3!CL:0000182;1.75e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,2.46e-23,3;CL:0002600,7.88e-16,2;CL:0002620,5.93e-15,23;CL:0002580,6.61e-11,3;CL:0002615,1.39e-10,3;CL:0000182,1.77e-10,12;CL:0000057,4.29e-08,76 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.13e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;8.65e-07;5!DOID:450;8.65e-07;5!DOID:66;8.65e-07;5!DOID:423;8.65e-07;5!DOID:0080000;8.65e-07;5!DOID:11722;8.65e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,8.41e-07,5;DOID:450,8.41e-07,5;DOID:66,8.41e-07,5;DOID:423,8.41e-07,5;DOID:0080000,8.41e-07,5;DOID:11722,8.41e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000475!3.46e-17!365;UBERON:0001049!4.24e-16!57;UBERON:0005068!4.24e-16!57;UBERON:0006241!4.24e-16!57;UBERON:0007135!4.24e-16!57;UBERON:0003075!5.69e-15!86;UBERON:0007284!5.69e-15!86;UBERON:0005743!1.15e-14!86;UBERON:0002346!7.61e-14!90;UBERON:0001017!7.07e-13!82;UBERON:0002616!9.42e-13!59;UBERON:0000073!2.47e-12!94;UBERON:0001016!2.47e-12!94;UBERON:0003076!1.92e-11!15;UBERON:0003057!1.92e-11!15;UBERON:0000955!2.39e-11!69;UBERON:0006238!2.39e-11!69;UBERON:0007023!4.31e-10!115;UBERON:0000062!1.19e-08!511;UBERON:0003056!2.40e-08!61;UBERON:0000033!2.46e-08!123;UBERON:0002780!2.99e-08!41;UBERON:0001890!2.99e-08!41;UBERON:0006240!2.99e-08!41;UBERON:0000153!4.08e-08!129;UBERON:0007811!4.08e-08!129;UBERON:0004733!4.78e-08!12;UBERON:0002028!4.78e-08!12;UBERON:0007277!4.78e-08!12;UBERON:0003080!5.99e-08!42;UBERON:0004732!2.70e-07!13;UBERON:0002298!3.06e-07!8;UBERON:0003688!3.54e-07!6;UBERON:0002358!3.54e-07!6;UBERON:0003684!3.54e-07!6;UBERON:0001178!3.54e-07!6;UBERON:0001893!5.41e-07!34;UBERON:0002097!5.88e-07!40;UBERON:0004121!6.94e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.34e-11;6!UBERON:0002358;1.34e-11;6!UBERON:0003684;1.34e-11;6!UBERON:0001178;1.34e-11;6!UBERON:0002367;4.87e-11;11!UBERON:0010147;4.87e-11;11!UBERON:0003937;3.93e-10;12!UBERON:0005399;3.93e-10;12!UBERON:0002336;1.09e-08;1!UBERON:0011215;1.09e-08;1!UBERON:0001018;1.09e-08;1!UBERON:0002473;1.09e-08;1!UBERON:0005340;1.09e-08;1!UBERON:0003544;1.09e-08;1!UBERON:0005970;1.09e-08;1!UBERON:0002316;1.09e-08;1!UBERON:0001020;1.09e-08;1!UBERON:0002437;1.09e-08;1!UBERON:0004457;6.76e-08;9!UBERON:0000042;6.76e-08;9!UBERON:0000310;2.84e-07;10!UBERON:0002097;5.45e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.53e-11,6;UBERON:0002358,1.53e-11,6;UBERON:0003684,1.53e-11,6;UBERON:0001178,1.53e-11,6;UBERON:0002367,4.51e-11,11;UBERON:0010147,4.51e-11,11;UBERON:0009846,4.51e-11,11;UBERON:0003353,4.51e-11,11;UBERON:0004902,4.51e-11,11;UBERON:0003820,4.51e-11,11;UBERON:0009847,4.51e-11,11;UBERON:0003937,3.67e-10,12;UBERON:0005399,3.67e-10,12;UBERON:0002336,9.02e-09,1;UBERON:0011215,9.02e-09,1;UBERON:0001018,9.02e-09,1;UBERON:0002473,9.02e-09,1;UBERON:0005340,9.02e-09,1;UBERON:0003544,9.02e-09,1;UBERON:0005970,9.02e-09,1;UBERON:0002316,9.02e-09,1;UBERON:0001020,9.02e-09,1;UBERON:0002437,9.02e-09,1;UBERON:0000162,9.94e-09,14;UBERON:0001353,9.94e-09,14;UBERON:0000163,9.94e-09,14;UBERON:0006866,9.94e-09,14;UBERON:0000164,9.94e-09,14;UBERON:0000931,9.94e-09,14;UBERON:0004122,3.73e-08,15;UBERON:0002097,4.85e-08,41;UBERON:0003929,7.13e-08,54;UBERON:0009569,1.82e-07,112;UBERON:0000310,2.75e-07,10;UBERON:0003102,3.75e-07,99;UBERON:0002530,4.11e-07,59;UBERON:0002199,4.43e-07,46;UBERON:0002416,4.43e-07,46 | |||
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| ||
|short_description=p28@MYLK | |||
}} | }} |
Latest revision as of 01:52, 20 September 2015
Short description: | p28@MYLK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_MYLK_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | 306bp_to_ENST00000360367, ENST00000506361, uc010hrs.1_5end |
EntrezGene: | MYLK |
HGNC: | 7590 |
UniProt: | Q06S79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 2.46e-23 | 3 |
smooth muscle cell of trachea | 7.88e-16 | 2 |
skin fibroblast | 5.93e-15 | 23 |
preadipocyte of the breast | 6.61e-11 | 3 |
adipocyte of omentum tissue | 1.39e-10 | 3 |
hepatocyte | 1.77e-10 | 12 |
fibroblast | 4.29e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.41e-07 | 5 |
myotonic disease | 8.41e-07 | 5 |
muscle tissue disease | 8.41e-07 | 5 |
myopathy | 8.41e-07 | 5 |
muscular disease | 8.41e-07 | 5 |
myotonic dystrophy | 8.41e-07 | 5 |