FFCP PHASE1:Mm9::chr2:3341395..3341479,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=227525 | |EntrezGene=227525 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1862 | |MCL_coexpression_id=1862 | ||
|TSSclassifier=NA | |||
|UniProt=Q8K4J0,E9Q4K8,Q32MX8 | |UniProt=Q8K4J0,E9Q4K8,Q32MX8 | ||
|association_with_transcript=0bp_to_ENSMUST00000061852,ENSMUST00000100462,ENSMUST00000100463,ENSMUST00000102988,ENSMUST00000115066,ENSMUST00000115067,ENSMUST00000131433,ENSMUST00000132565,ENSMUST00000146027,NM_001110214,NM_146114,NM_175683,uc008idy.2,uc008idz.2,uc008iea.2,uc008ieb.2,uc012bor.1,uc012bos.1_5end | |association_with_transcript=0bp_to_ENSMUST00000061852,ENSMUST00000100462,ENSMUST00000100463,ENSMUST00000102988,ENSMUST00000115066,ENSMUST00000115067,ENSMUST00000131433,ENSMUST00000132565,ENSMUST00000146027,NM_001110214,NM_146114,NM_175683,uc008idy.2,uc008idz.2,uc008iea.2,uc008ieb.2,uc012bor.1,uc012bos.1_5end | ||
|cluster_id=chr2:3341395..3341479,+ | |||
|description=CAGE_peak_1_at_Dclre1c_5end | |description=CAGE_peak_1_at_Dclre1c_5end | ||
|id=chr2:3341395..3341479,+ | |id=chr2:3341395..3341479,+ | ||
Latest revision as of 15:09, 26 September 2015
| Short description: | p1@Dclre1c |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Dclre1c_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1862 |
| Association with transcript: | 0bp_to_ENSMUST00000061852, ENSMUST00000100462, ENSMUST00000100463, ENSMUST00000102988, ENSMUST00000115066, ENSMUST00000115067, ENSMUST00000131433, ENSMUST00000132565, ENSMUST00000146027, NM_001110214, NM_146114, NM_175683, uc008idy.2, uc008idz.2, uc008iea.2, uc008ieb.2, uc012bor.1, uc012bos.1_5end |
| EntrezGene: | Dclre1c |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic lineage restricted progenitor cell | 6.66e-10 | 25 |
| lymphoid lineage restricted progenitor cell | 1.00e-07 | 12 |
| hematopoietic cell | 1.01e-07 | 32 |
| hematopoietic oligopotent progenitor cell | 1.01e-07 | 32 |
| hematopoietic stem cell | 1.01e-07 | 32 |
| hematopoietic multipotent progenitor cell | 1.01e-07 | 32 |
| lymphocyte | 2.70e-07 | 13 |
| common lymphoid progenitor | 2.70e-07 | 13 |
| T cell | 4.46e-07 | 11 |
| pro-T cell | 4.46e-07 | 11 |
| Ontology term | p-value | n |
|---|---|---|
| hemolymphoid system | 5.93e-12 | 48 |
| immune system | 5.93e-12 | 48 |
| hematopoietic system | 3.11e-11 | 45 |
| blood island | 3.11e-11 | 45 |
| mixed endoderm/mesoderm-derived structure | 1.88e-10 | 35 |
| hemopoietic organ | 7.77e-10 | 29 |
| immune organ | 7.77e-10 | 29 |
| digestive system | 6.60e-08 | 116 |
| digestive tract | 6.60e-08 | 116 |
| primitive gut | 6.60e-08 | 116 |
| gland of gut | 6.99e-08 | 24 |
| pharynx | 7.90e-08 | 24 |
| upper respiratory tract | 7.90e-08 | 24 |
| chordate pharynx | 7.90e-08 | 24 |
| pharyngeal arch system | 7.90e-08 | 24 |
| pharyngeal region of foregut | 7.90e-08 | 24 |
| subdivision of digestive tract | 1.08e-07 | 114 |
| endoderm-derived structure | 1.09e-07 | 118 |
| endoderm | 1.09e-07 | 118 |
| presumptive endoderm | 1.09e-07 | 118 |
| thymus | 1.25e-07 | 23 |
| neck | 1.25e-07 | 23 |
| respiratory system epithelium | 1.25e-07 | 23 |
| hemolymphoid system gland | 1.25e-07 | 23 |
| pharyngeal epithelium | 1.25e-07 | 23 |
| thymic region | 1.25e-07 | 23 |
| pharyngeal gland | 1.25e-07 | 23 |
| entire pharyngeal arch endoderm | 1.25e-07 | 23 |
| thymus primordium | 1.25e-07 | 23 |
| early pharyngeal endoderm | 1.25e-07 | 23 |
| foregut | 7.62e-07 | 80 |
| gut epithelium | 7.65e-07 | 55 |
