FFCP PHASE1:Mm9::chr15:60018669..60018688,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=285 | |MCL_coexpression_id=285 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=274bp_to_uc007vxz.1_5end | |association_with_transcript=274bp_to_uc007vxz.1_5end | ||
|cluster_id=chr15:60018669..60018688,- | |||
|description=CAGE_peak_4_at_uc007vxz.1_5end | |description=CAGE_peak_4_at_uc007vxz.1_5end | ||
|id=chr15:60018669..60018688,- | |id=chr15:60018669..60018688,- | ||
|ontology_enrichment_celltype=CL:0000791!5.43e-16!9;CL:0000789!5.43e-16!9;CL:0002420!5.43e-16!9;CL:0002419!5.43e-16!9;CL:0000790!5.43e-16!9;CL:0000624!2.38e-14!8;CL:0000084!1.20e-12!11;CL:0000827!1.20e-12!11;CL:0000838!2.15e-11!12;CL:0000893!4.29e-11!6;CL:0002489!4.29e-11!6;CL:0000898!4.29e-11!6;CL:0000809!4.29e-11!6;CL:0000810!4.29e-11!6;CL:0000895!4.29e-11!6;CL:0000808!4.29e-11!6;CL:0000894!4.29e-11!6;CL:0000806!4.29e-11!6;CL:0000807!4.29e-11!6;CL:0000805!4.29e-11!6;CL:0002425!4.29e-11!6;CL:0002436!4.29e-11!6;CL:0002427!4.29e-11!6;CL:0002428!4.29e-11!6;CL:0002429!4.29e-11!6;CL:0002433!4.29e-11!6;CL:0002431!4.29e-11!6;CL:0002432!4.29e-11!6;CL:0002031!5.07e-11!25;CL:0000542!2.45e-10!13;CL:0000051!2.45e-10!13;CL:0000988!9.13e-08!32;CL:0002032!9.13e-08!32;CL:0000037!9.13e-08!32;CL:0000566!9.13e-08!32;CL:0000837!9.13e-08!32;CL:0000738!2.27e-07!17;CL:0002087!2.27e-07!17;CL:0000553!6.32e-07!6;CL:0000556!6.32e-07!6 | |ontology_enrichment_celltype=CL:0000791!5.43e-16!9;CL:0000789!5.43e-16!9;CL:0002420!5.43e-16!9;CL:0002419!5.43e-16!9;CL:0000790!5.43e-16!9;CL:0000624!2.38e-14!8;CL:0000084!1.20e-12!11;CL:0000827!1.20e-12!11;CL:0000838!2.15e-11!12;CL:0000893!4.29e-11!6;CL:0002489!4.29e-11!6;CL:0000898!4.29e-11!6;CL:0000809!4.29e-11!6;CL:0000810!4.29e-11!6;CL:0000895!4.29e-11!6;CL:0000808!4.29e-11!6;CL:0000894!4.29e-11!6;CL:0000806!4.29e-11!6;CL:0000807!4.29e-11!6;CL:0000805!4.29e-11!6;CL:0002425!4.29e-11!6;CL:0002436!4.29e-11!6;CL:0002427!4.29e-11!6;CL:0002428!4.29e-11!6;CL:0002429!4.29e-11!6;CL:0002433!4.29e-11!6;CL:0002431!4.29e-11!6;CL:0002432!4.29e-11!6;CL:0002031!5.07e-11!25;CL:0000542!2.45e-10!13;CL:0000051!2.45e-10!13;CL:0000988!9.13e-08!32;CL:0002032!9.13e-08!32;CL:0000037!9.13e-08!32;CL:0000566!9.13e-08!32;CL:0000837!9.13e-08!32;CL:0000738!2.27e-07!17;CL:0002087!2.27e-07!17;CL:0000553!6.32e-07!6;CL:0000556!6.32e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.85e-44,9;CL:0000789,1.85e-44,9;CL:0002420,1.85e-44,9;CL:0002419,1.85e-44,9;CL:0000790,1.85e-44,9;CL:0000624,1.52e-39,8;CL:0000084,3.43e-36,11;CL:0000827,3.43e-36,11;CL:0000838,4.35e-33,12;CL:0000542,1.84e-30,13;CL:0000051,1.84e-30,13;CL:0000893,7.85e-30,6;CL:0002489,7.85e-30,6;CL:0000898,7.85e-30,6;CL:0000809,7.85e-30,6;CL:0000810,7.85e-30,6;CL:0000895,7.85e-30,6;CL:0000808,7.85e-30,6;CL:0000894,7.85e-30,6;CL:0000806,7.85e-30,6;CL:0000807,7.85e-30,6;CL:0000805,7.85e-30,6;CL:0002425,7.85e-30,6;CL:0002436,7.85e-30,6;CL:0002427,7.85e-30,6;CL:0002428,7.85e-30,6;CL:0002429,7.85e-30,6;CL:0002433,7.85e-30,6;CL:0002431,7.85e-30,6;CL:0002432,7.85e-30,6;CL:0002031,3.39e-27,25;CL:0000738,4.90e-23,17;CL:0002087,4.90e-23,17;CL:0000988,7.08e-21,32;CL:0002032,7.08e-21,32;CL:0000037,7.08e-21,32;CL:0000837,7.08e-21,32;CL:0002320,5.46e-14,46;CL:0000134,5.46e-14,46;CL:0000219,1.19e-11,54;CL:0000553,7.10e-08,6;CL:0000556,7.10e-08,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.33e-20!48;UBERON:0004177!6.76e-20!29;UBERON:0002390!3.19e-18!45;UBERON:0003061!3.19e-18!45;UBERON:0002405!1.39e-15!70;UBERON:0000065!3.21e-15!41;UBERON:0002370!9.01e-15!23;UBERON:0000974!9.01e-15!23;UBERON:0004807!9.01e-15!23;UBERON:0005058!9.01e-15!23;UBERON:0003351!9.01e-15!23;UBERON:0009113!9.01e-15!23;UBERON:0003295!9.01e-15!23;UBERON:0009722!9.01e-15!23;UBERON:0005562!9.01e-15!23;UBERON:0007690!9.01e-15!23;UBERON:0001004!1.06e-14!42;UBERON:0006562!5.74e-14!24;UBERON:0003408!5.74e-14!24;UBERON:0001557!5.74e-14!24;UBERON:0001042!5.74e-14!24;UBERON:0008814!5.74e-14!24;UBERON:0009145!5.74e-14!24;UBERON:0005057!2.83e-13!51;UBERON:0000072!6.41e-12!27;UBERON:0001041!2.20e-10!92;UBERON:0005911!6.52e-10!69;UBERON:0003081!1.35e-09!88;UBERON:0000077!2.09e-09!97;UBERON:0000063!3.22e-08!35;UBERON:0001007!1.71e-07!128;UBERON:0001555!1.71e-07!128;UBERON:0007026!1.71e-07!128;UBERON:0004119!3.08e-07!130;UBERON:0000925!3.08e-07!130;UBERON:0006595!3.08e-07!130;UBERON:0004921!3.91e-07!126;UBERON:0004185!3.91e-07!126;UBERON:0001048!4.66e-07!147 | |ontology_enrichment_uberon=UBERON:0002193!6.33e-20!48;UBERON:0004177!6.76e-20!29;UBERON:0002390!3.19e-18!45;UBERON:0003061!3.19e-18!45;UBERON:0002405!1.39e-15!70;UBERON:0000065!3.21e-15!41;UBERON:0002370!9.01e-15!23;UBERON:0000974!9.01e-15!23;UBERON:0004807!9.01e-15!23;UBERON:0005058!9.01e-15!23;UBERON:0003351!9.01e-15!23;UBERON:0009113!9.01e-15!23;UBERON:0003295!9.01e-15!23;UBERON:0009722!9.01e-15!23;UBERON:0005562!9.01e-15!23;UBERON:0007690!9.01e-15!23;UBERON:0001004!1.06e-14!42;UBERON:0006562!5.74e-14!24;UBERON:0003408!5.74e-14!24;UBERON:0001557!5.74e-14!24;UBERON:0001042!5.74e-14!24;UBERON:0008814!5.74e-14!24;UBERON:0009145!5.74e-14!24;UBERON:0005057!2.83e-13!51;UBERON:0000072!6.41e-12!27;UBERON:0001041!2.20e-10!92;UBERON:0005911!6.52e-10!69;UBERON:0003081!1.35e-09!88;UBERON:0000077!2.09e-09!97;UBERON:0000063!3.22e-08!35;UBERON:0001007!1.71e-07!128;UBERON:0001555!1.71e-07!128;UBERON:0007026!1.71e-07!128;UBERON:0004119!3.08e-07!130;UBERON:0000925!3.08e-07!130;UBERON:0006595!3.08e-07!130;UBERON:0004921!3.91e-07!126;UBERON:0004185!3.91e-07!126;UBERON:0001048!4.66e-07!147 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.46e-14,46;UBERON:0002193,3.27e-13,48;UBERON:0002405,3.27e-13,48;UBERON:0002390,9.70e-12,45;UBERON:0003061,9.70e-12,45;UBERON:0004177,4.56e-10,29;UBERON:0005057,4.56e-10,29;UBERON:0002370,5.28e-10,23;UBERON:0000974,5.28e-10,23;UBERON:0004807,5.28e-10,23;UBERON:0005058,5.28e-10,23;UBERON:0003351,5.28e-10,23;UBERON:0009113,5.28e-10,23;UBERON:0003295,5.28e-10,23;UBERON:0009722,5.28e-10,23;UBERON:0005562,5.28e-10,23;UBERON:0007690,5.28e-10,23;UBERON:0006562,1.48e-09,24;UBERON:0003408,1.48e-09,24;UBERON:0001557,1.48e-09,24;UBERON:0001042,1.48e-09,24;UBERON:0008814,1.48e-09,24;UBERON:0009145,1.48e-09,24;UBERON:0000065,1.43e-08,41;UBERON:0000072,2.05e-08,27;UBERON:0001004,2.45e-08,42;UBERON:0000077,3.56e-08,35 | |||
|phase1_expression=0,0,0,0,0,0,0,19.2393751927949,9.15126693985834,5.38348410540585,1.54096171402954,2.07407613387875,21.9136934311943,29.1109940055261,0.333109761815663,1.61980213911861,0,2.99689057090326,4.11343300817216,0.42438965179803,0.17008658030214,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.5282592781021,15.7964085596958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.59857431606684,34.9566142923682,0,0,0,0,0,0,0,0,0.433798070759735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502670417600539,0,0.38992817423824,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0.482443521363367,1.66277871149944,0,0,0,0,0,0,0,0.315270288212382,0.221464689648775,0.318909537314974,0.81931657357869,0.863424909329478,1.15719246865209,0,0,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120625849856312,0,0,0,0,1.70870880797853,0,0.185194527369712,0.376736914009382,0.956859594047176,0.915112692826091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0.198681354781265,0.600977247599844,0.590758108698309,0.908698049533329,0.0762068066549998,0.201652370273681,0.779663045918019,0.962118416403295,1.8700304349051,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,19.2393751927949,9.15126693985834,5.38348410540585,1.54096171402954,2.07407613387875,21.9136934311943,29.1109940055261,0.333109761815663,1.61980213911861,0,2.99689057090326,4.11343300817216,0.42438965179803,0.17008658030214,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.5282592781021,15.7964085596958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.59857431606684,34.9566142923682,0,0,0,0,0,0,0,0,0.433798070759735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502670417600539,0,0.38992817423824,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0.482443521363367,1.66277871149944,0,0,0,0,0,0,0,0.315270288212382,0.221464689648775,0.318909537314974,0.81931657357869,0.863424909329478,1.15719246865209,0,0,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120625849856312,0,0,0,0,1.70870880797853,0,0.185194527369712,0.376736914009382,0.956859594047176,0.915112692826091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0.198681354781265,0.600977247599844,0.590758108698309,0.908698049533329,0.0762068066549998,0.201652370273681,0.779663045918019,0.962118416403295,1.8700304349051,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p4@uc007vxz.1 | |short_description=p4@uc007vxz.1 | ||
}} | }} |
Latest revision as of 08:28, 5 August 2015
Short description: | p4@uc007vxz.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_uc007vxz.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:285 |
Association with transcript: | 274bp_to_uc007vxz.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.46e-14 | 46 |
hemolymphoid system | 3.27e-13 | 48 |
immune system | 3.27e-13 | 48 |
hematopoietic system | 9.70e-12 | 45 |
blood island | 9.70e-12 | 45 |
hemopoietic organ | 4.56e-10 | 29 |
immune organ | 4.56e-10 | 29 |
thymus | 5.28e-10 | 23 |
neck | 5.28e-10 | 23 |
respiratory system epithelium | 5.28e-10 | 23 |
hemolymphoid system gland | 5.28e-10 | 23 |
pharyngeal epithelium | 5.28e-10 | 23 |
thymic region | 5.28e-10 | 23 |
pharyngeal gland | 5.28e-10 | 23 |
entire pharyngeal arch endoderm | 5.28e-10 | 23 |
thymus primordium | 5.28e-10 | 23 |
early pharyngeal endoderm | 5.28e-10 | 23 |
pharynx | 1.48e-09 | 24 |
gland of gut | 1.48e-09 | 24 |
upper respiratory tract | 1.48e-09 | 24 |
chordate pharynx | 1.48e-09 | 24 |
pharyngeal arch system | 1.48e-09 | 24 |
pharyngeal region of foregut | 1.48e-09 | 24 |
respiratory tract | 1.43e-08 | 41 |
segment of respiratory tract | 2.05e-08 | 27 |
respiratory system | 2.45e-08 | 42 |
mixed endoderm/mesoderm-derived structure | 3.56e-08 | 35 |