FFCP PHASE1:Mm9::chr17:57217870..57217881,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70785 | |EntrezGene=70785 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |MCL_coexpression_id=36 | ||
|TSSclassifier=NA | |||
|UniProt=Q8CFK6 | |UniProt=Q8CFK6 | ||
|association_with_transcript=51bp_to_ENSMUST00000011623,NM_153551,uc008ddy.1,uc008ddz.1_5end | |association_with_transcript=51bp_to_ENSMUST00000011623,NM_153551,uc008ddy.1,uc008ddz.1_5end | ||
|cluster_id=chr17:57217870..57217881,- | |||
|description=CAGE_peak_3_at_Dennd1c_5end | |description=CAGE_peak_3_at_Dennd1c_5end | ||
|id=chr17:57217870..57217881,- | |id=chr17:57217870..57217881,- | ||
|ontology_enrichment_celltype=CL:0000838!2.43e-11!12;CL:0000084!1.45e-10!11;CL:0000827!1.45e-10!11;CL:0000542!3.93e-10!13;CL:0000051!3.93e-10!13;CL:0002031!3.14e-09!25;CL:0000791!6.78e-09!9;CL:0000789!6.78e-09!9;CL:0002420!6.78e-09!9;CL:0002419!6.78e-09!9;CL:0000790!6.78e-09!9;CL:0000738!4.74e-08!17;CL:0002087!4.74e-08!17;CL:0000624!5.30e-08!8;CL:0000988!1.29e-07!32;CL:0002032!1.29e-07!32;CL:0000037!1.29e-07!32;CL:0000566!1.29e-07!32;CL:0000837!1.29e-07!32 | |ontology_enrichment_celltype=CL:0000838!2.43e-11!12;CL:0000084!1.45e-10!11;CL:0000827!1.45e-10!11;CL:0000542!3.93e-10!13;CL:0000051!3.93e-10!13;CL:0002031!3.14e-09!25;CL:0000791!6.78e-09!9;CL:0000789!6.78e-09!9;CL:0002420!6.78e-09!9;CL:0002419!6.78e-09!9;CL:0000790!6.78e-09!9;CL:0000738!4.74e-08!17;CL:0002087!4.74e-08!17;CL:0000624!5.30e-08!8;CL:0000988!1.29e-07!32;CL:0002032!1.29e-07!32;CL:0000037!1.29e-07!32;CL:0000566!1.29e-07!32;CL:0000837!1.29e-07!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.00e-16,12;CL:0000542,4.92e-15,13;CL:0000051,4.92e-15,13;CL:0000084,1.59e-14,11;CL:0000827,1.59e-14,11;CL:0000738,4.16e-11,17;CL:0002087,4.16e-11,17;CL:0000791,1.40e-10,9;CL:0000789,1.40e-10,9;CL:0002420,1.40e-10,9;CL:0002419,1.40e-10,9;CL:0000790,1.40e-10,9;CL:0002031,2.08e-10,25;CL:0000624,1.43e-08,8;CL:0000988,1.16e-07,32;CL:0002032,1.16e-07,32;CL:0000037,1.16e-07,32;CL:0000837,1.16e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.27e-18!29;UBERON:0002193!3.46e-17!48;UBERON:0003408!1.48e-15!24;UBERON:0002390!3.95e-15!45;UBERON:0003061!3.95e-15!45;UBERON:0002370!7.24e-15!23;UBERON:0000974!7.24e-15!23;UBERON:0004807!7.24e-15!23;UBERON:0005058!7.24e-15!23;UBERON:0003351!7.24e-15!23;UBERON:0009113!7.24e-15!23;UBERON:0003295!7.24e-15!23;UBERON:0009722!7.24e-15!23;UBERON:0005562!7.24e-15!23;UBERON:0007690!7.24e-15!23;UBERON:0006562!6.43e-14!24;UBERON:0001557!6.43e-14!24;UBERON:0001042!6.43e-14!24;UBERON:0008814!6.43e-14!24;UBERON:0009145!6.43e-14!24;UBERON:0000072!1.62e-11!27;UBERON:0002405!2.60e-11!70;UBERON:0001004!5.75e-11!42;UBERON:0000065!2.20e-10!41;UBERON:0005057!4.36e-10!51;UBERON:0003081!4.92e-08!88;UBERON:0000063!2.87e-07!35 | |ontology_enrichment_uberon=UBERON:0004177!1.27e-18!29;UBERON:0002193!3.46e-17!48;UBERON:0003408!1.48e-15!24;UBERON:0002390!3.95e-15!45;UBERON:0003061!3.95e-15!45;UBERON:0002370!7.24e-15!23;UBERON:0000974!7.24e-15!23;UBERON:0004807!7.24e-15!23;UBERON:0005058!7.24e-15!23;UBERON:0003351!7.24e-15!23;UBERON:0009113!7.24e-15!23;UBERON:0003295!7.24e-15!23;UBERON:0009722!7.24e-15!23;UBERON:0005562!7.24e-15!23;UBERON:0007690!7.24e-15!23;UBERON:0006562!6.43e-14!24;UBERON:0001557!6.43e-14!24;UBERON:0001042!6.43e-14!24;UBERON:0008814!6.43e-14!24;UBERON:0009145!6.43e-14!24;UBERON:0000072!1.62e-11!27;UBERON:0002405!2.60e-11!70;UBERON:0001004!5.75e-11!42;UBERON:0000065!2.20e-10!41;UBERON:0005057!4.36e-10!51;UBERON:0003081!4.92e-08!88;UBERON:0000063!2.87e-07!35 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.77e-23,23;UBERON:0000974,1.77e-23,23;UBERON:0004807,1.77e-23,23;UBERON:0005058,1.77e-23,23;UBERON:0003351,1.77e-23,23;UBERON:0009113,1.77e-23,23;UBERON:0003295,1.77e-23,23;UBERON:0009722,1.77e-23,23;UBERON:0005562,1.77e-23,23;UBERON:0007690,1.77e-23,23;UBERON:0004177,4.73e-23,29;UBERON:0005057,4.73e-23,29;UBERON:0006562,2.34e-22,24;UBERON:0003408,2.34e-22,24;UBERON:0001557,2.34e-22,24;UBERON:0001042,2.34e-22,24;UBERON:0008814,2.34e-22,24;UBERON:0009145,2.34e-22,24;UBERON:0000072,1.73e-19,27;UBERON:0000077,2.00e-18,35;UBERON:0002193,9.40e-18,48;UBERON:0002405,9.40e-18,48;UBERON:0002390,5.03e-17,45;UBERON:0003061,5.03e-17,45;UBERON:0007811,9.36e-14,36;UBERON:0000065,2.45e-13,41;UBERON:0001004,6.22e-13,42;UBERON:0000153,5.78e-11,43;UBERON:0000490,4.79e-08,66;UBERON:0003929,7.50e-08,55;UBERON:0002368,6.27e-07,60;UBERON:0001041,8.48e-07,80;UBERON:0003081,9.14e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,6.06879620175408,0.563154888606667,1.17032263160997,0.513653904676515,0.398860794976682,6.16322627752341,5.76974655965383,0.333109761815663,0.607425802169478,0,1.57731082679119,1.23402990245165,0.84877930359606,0.255129870453209,2.38298282882125,1.56719873483361,0.319984845586813,0.68822784320151,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,2.09265815368454,0.7813353445238,2.61761871986899,4.70585190424811,2.73218193983378,1.94204141212461,0,0,0,0,0,0,0,0,0,1.34226084846189,4.35217285206807,3.02484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,5.17875767294343,0,0.173485326766136,0,0,0,0,0,0,0.433798070759735,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0,0,0,0.239630249011841,0,0.762421362438388,0,0,0,0,0,0,0,0.101839363850316,0.497627882440372,0.252722758433675,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0.243206428637567,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0,0.201683524623343,0.22237804384487,0,0,0,0.251335208800269,0,0.58489226135736,0,0,0.398282546508734,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0.324270453550071,0,0,0,0,0.252578877947112,0,0,0.739012760666419,0,0,0,0,0,0,0.195133647857799,0,0,0.478364305972461,1.47476983244164,0.518054945597687,0.867894351489069,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0.0603129249281559,0,0,0.291480836629851,0,0.341741761595705,0.412773735926445,0.185194527369712,0.565105371014073,1.36694227721025,1.60144721244566,2.03974115992626,3.35883485576779,2.3493995546752,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0,0,0,5.68820017130721,1.21635129174099,0.205421914329655,0.909445760844565,1.25318686967237,3.17890167650024,3.846254384639,4.57837534241189,4.34155734777035,3.96275394605999,3.83139503519994,4.48306251402861,4.81059208201647,6.54510652216786,0,0,0,0,0,0.375364950902364,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0.0574354689556133,0,0,0,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0,0.0941093804153306,0,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0.429742108096597,0.382576664137687,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,6.06879620175408,0.563154888606667,1.17032263160997,0.513653904676515,0.398860794976682,6.16322627752341,5.76974655965383,0.333109761815663,0.607425802169478,0,1.57731082679119,1.23402990245165,0.84877930359606,0.255129870453209,2.38298282882125,1.56719873483361,0.319984845586813,0.68822784320151,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,2.09265815368454,0.7813353445238,2.61761871986899,4.70585190424811,2.73218193983378,1.94204141212461,0,0,0,0,0,0,0,0,0,1.34226084846189,4.35217285206807,3.02484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,5.17875767294343,0,0.173485326766136,0,0,0,0,0,0,0.433798070759735,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0,0,0,0.239630249011841,0,0.762421362438388,0,0,0,0,0,0,0,0.101839363850316,0.497627882440372,0.252722758433675,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0.243206428637567,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0,0.201683524623343,0.22237804384487,0,0,0,0.251335208800269,0,0.58489226135736,0,0,0.398282546508734,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0.324270453550071,0,0,0,0,0.252578877947112,0,0,0.739012760666419,0,0,0,0,0,0,0.195133647857799,0,0,0.478364305972461,1.47476983244164,0.518054945597687,0.867894351489069,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0.0603129249281559,0,0,0.291480836629851,0,0.341741761595705,0.412773735926445,0.185194527369712,0.565105371014073,1.36694227721025,1.60144721244566,2.03974115992626,3.35883485576779,2.3493995546752,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0,0,0,5.68820017130721,1.21635129174099,0.205421914329655,0.909445760844565,1.25318686967237,3.17890167650024,3.846254384639,4.57837534241189,4.34155734777035,3.96275394605999,3.83139503519994,4.48306251402861,4.81059208201647,6.54510652216786,0,0,0,0,0,0.375364950902364,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0.0574354689556133,0,0,0,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0,0.0941093804153306,0,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0.429742108096597,0.382576664137687,0,0.231867835620421 | ||
|short_description=p3@Dennd1c | |short_description=p3@Dennd1c | ||
}} | }} |
Latest revision as of 17:37, 26 September 2015
Short description: | p3@Dennd1c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dennd1c_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 51bp_to_ENSMUST00000011623, NM_153551, uc008ddy.1, uc008ddz.1_5end |
EntrezGene: | Dennd1c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.00e-16 | 12 |
lymphocyte | 4.92e-15 | 13 |
common lymphoid progenitor | 4.92e-15 | 13 |
T cell | 1.59e-14 | 11 |
pro-T cell | 1.59e-14 | 11 |
leukocyte | 4.16e-11 | 17 |
nongranular leukocyte | 4.16e-11 | 17 |
mature alpha-beta T cell | 1.40e-10 | 9 |
alpha-beta T cell | 1.40e-10 | 9 |
immature T cell | 1.40e-10 | 9 |
mature T cell | 1.40e-10 | 9 |
immature alpha-beta T cell | 1.40e-10 | 9 |
hematopoietic lineage restricted progenitor cell | 2.08e-10 | 25 |
CD4-positive, alpha-beta T cell | 1.43e-08 | 8 |
hematopoietic cell | 1.16e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.16e-07 | 32 |
hematopoietic stem cell | 1.16e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.16e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.77e-23 | 23 |
neck | 1.77e-23 | 23 |
respiratory system epithelium | 1.77e-23 | 23 |
hemolymphoid system gland | 1.77e-23 | 23 |
pharyngeal epithelium | 1.77e-23 | 23 |
thymic region | 1.77e-23 | 23 |
pharyngeal gland | 1.77e-23 | 23 |
entire pharyngeal arch endoderm | 1.77e-23 | 23 |
thymus primordium | 1.77e-23 | 23 |
early pharyngeal endoderm | 1.77e-23 | 23 |
hemopoietic organ | 4.73e-23 | 29 |
immune organ | 4.73e-23 | 29 |
pharynx | 2.34e-22 | 24 |
gland of gut | 2.34e-22 | 24 |
upper respiratory tract | 2.34e-22 | 24 |
chordate pharynx | 2.34e-22 | 24 |
pharyngeal arch system | 2.34e-22 | 24 |
pharyngeal region of foregut | 2.34e-22 | 24 |
segment of respiratory tract | 1.73e-19 | 27 |
mixed endoderm/mesoderm-derived structure | 2.00e-18 | 35 |
hemolymphoid system | 9.40e-18 | 48 |
immune system | 9.40e-18 | 48 |
hematopoietic system | 5.03e-17 | 45 |
blood island | 5.03e-17 | 45 |
craniocervical region | 9.36e-14 | 36 |
respiratory tract | 2.45e-13 | 41 |
respiratory system | 6.22e-13 | 42 |
anterior region of body | 5.78e-11 | 43 |
unilaminar epithelium | 4.79e-08 | 66 |
gut epithelium | 7.50e-08 | 55 |
endocrine gland | 6.27e-07 | 60 |
foregut | 8.48e-07 | 80 |
lateral plate mesoderm | 9.14e-07 | 87 |