FFCP PHASE1:Hg19::chr2:233320827..233320853,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:233320827..233320853,+
|short_description=p2@ALPI
|description=CAGE_peak_2_at_ALPI_5end
|association_with_transcript=0bp_to_ENST00000295463,ENST00000457560...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=248 | |EntrezGene=248 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=437 | |HGNC=437 | ||
|TSSclassifier=strong | |||
|UniProt=P09923,F8WEQ0 | |UniProt=P09923,F8WEQ0 | ||
|association_with_transcript=0bp_to_ENST00000295463,ENST00000457560,NM_001631,uc002vst.3_5end | |||
|cluster_id=chr2:233320827..233320853,+ | |||
|coexpression_cluster_id=C285 | |||
|description=CAGE_peak_2_at_ALPI_5end | |||
|id=chr2:233320827..233320853,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002563;8.21e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,8.21e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.54e-26;29!UBERON:0006595;1.58e-09;86 | |||
|ontology_enrichment_disease=DOID:305!7.83e-10!106;DOID:0050687!6.18e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.53e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0001737!6.36e-39!9;UBERON:0001557!2.80e-21!19;UBERON:0004921!1.47e-14!129;UBERON:0004185!1.47e-14!129;UBERON:0008947!5.86e-14!38;UBERON:0003258!5.86e-14!38;UBERON:0000160!2.07e-13!27;UBERON:0000059!2.52e-13!11;UBERON:0000072!5.78e-13!46;UBERON:0001007!2.77e-12!155;UBERON:0001555!2.77e-12!155;UBERON:0007026!2.77e-12!155;UBERON:0001155!1.31e-11!9;UBERON:0000063!2.42e-11!97;UBERON:0000065!7.14e-11!53;UBERON:0004119!9.03e-11!169;UBERON:0000925!9.03e-11!169;UBERON:0006595!9.03e-11!169;UBERON:0005409!5.43e-10!35;UBERON:0004907!5.08e-08!5;UBERON:0000077!2.46e-07!130;UBERON:0001004!2.84e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.57e-72;9!UBERON:0001557;2.57e-72;9!UBERON:0000160;2.71e-34;17!UBERON:0005409;1.43e-26;22!UBERON:0000072;6.19e-19;37!UBERON:0000059;1.10e-17;11!UBERON:0000065;1.48e-16;44!UBERON:0004921;1.26e-15;33!UBERON:0002108;2.87e-15;4!UBERON:0001155;3.10e-14;9!UBERON:0001242;8.21e-09;4!UBERON:0001262;8.21e-09;4!UBERON:0004786;8.21e-09;4!UBERON:0004808;8.21e-09;4!UBERON:0001277;8.21e-09;4!UBERON:0001052;1.10e-08;4!UBERON:0001004;1.04e-07;65!UBERON:0004907;4.09e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.46e-72,9;UBERON:0000160,2.55e-34,17;UBERON:0001557,1.24e-33,19;UBERON:0004921,3.22e-26,118;UBERON:0005409,2.22e-23,25;UBERON:0001007,1.02e-20,145;UBERON:0001555,1.02e-20,145;UBERON:0007026,1.02e-20,145;UBERON:0008947,6.90e-20,38;UBERON:0003258,6.90e-20,38;UBERON:0004119,1.87e-18,160;UBERON:0000925,1.87e-18,160;UBERON:0006595,1.87e-18,160;UBERON:0000059,1.04e-17,11;UBERON:0000072,8.95e-16,47;UBERON:0002108,2.87e-15,4;UBERON:0001155,2.99e-14,9;UBERON:0000065,1.60e-13,54;UBERON:0011216,1.78e-13,223;UBERON:0001041,1.89e-09,87;UBERON:0001004,1.97e-09,74;UBERON:0001242,8.21e-09,4;UBERON:0001262,8.21e-09,4;UBERON:0004786,8.21e-09,4;UBERON:0004808,8.21e-09,4;UBERON:0001277,8.21e-09,4;UBERON:0001052,1.08e-08,4;UBERON:0004907,4.03e-07,5 | |||
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| ||
|short_description=p2@ALPI | |||
}} | }} |
Latest revision as of 21:24, 15 September 2015
Short description: | p2@ALPI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ALPI_5end |
Coexpression cluster: | C285_cervical_Hep2_small_colon_temporal_duodenum_bronchogenic |
Association with transcript: | 0bp_to_ENST00000295463, ENST00000457560, NM_001631, uc002vst.3_5end |
EntrezGene: | ALPI |
HGNC: | 437 |
UniProt: | P09923F8WEQ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 8.21e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.46e-72 | 9 |
intestine | 2.55e-34 | 17 |
upper respiratory tract | 1.24e-33 | 19 |
subdivision of digestive tract | 3.22e-26 | 118 |
gastrointestinal system | 2.22e-23 | 25 |
digestive system | 1.02e-20 | 145 |
digestive tract | 1.02e-20 | 145 |
primitive gut | 1.02e-20 | 145 |
respiratory primordium | 6.90e-20 | 38 |
endoderm of foregut | 6.90e-20 | 38 |
endoderm-derived structure | 1.87e-18 | 160 |
endoderm | 1.87e-18 | 160 |
presumptive endoderm | 1.87e-18 | 160 |
large intestine | 1.04e-17 | 11 |
segment of respiratory tract | 8.95e-16 | 47 |
small intestine | 2.87e-15 | 4 |
colon | 2.99e-14 | 9 |
respiratory tract | 1.60e-13 | 54 |
organ system subdivision | 1.78e-13 | 223 |
foregut | 1.89e-09 | 87 |
respiratory system | 1.97e-09 | 74 |
intestinal mucosa | 8.21e-09 | 4 |
wall of intestine | 8.21e-09 | 4 |
gastrointestinal system mucosa | 8.21e-09 | 4 |
gastrointestinal system epithelium | 8.21e-09 | 4 |
intestinal epithelium | 8.21e-09 | 4 |
rectum | 1.08e-08 | 4 |
lower digestive tract | 4.03e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.53e-09 | 106 |