FFCP PHASE1:Hg19::chr2:216274715..216274759,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:216274715..216274759,-
|short_description=p22@FN1
|description=CAGE_peak_22_at_FN1_5end
|association_with_transcript=-42bp_to_ENST00000471193_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-42bp_to_ENST00000471193_5end | |||
|cluster_id=chr2:216274715..216274759,- | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_22_at_FN1_5end | |||
|id=chr2:216274715..216274759,- | |||
|ontology_enrichment_celltype=CL:0000055!6.04e-33!180;CL:0000057!1.49e-23!75;CL:0000680!2.51e-14!57;CL:0000056!2.51e-14!57;CL:0000355!2.51e-14!57;CL:0000183!7.03e-14!59;CL:0002371!9.33e-14!591;CL:0000187!4.33e-13!54;CL:0000220!1.44e-12!246;CL:0002321!3.11e-12!248;CL:0000144!3.18e-12!625;CL:0000222!2.35e-11!119;CL:0000393!6.04e-10!60;CL:0000211!6.04e-10!60;CL:0002620!2.01e-09!23;CL:0000192!1.62e-08!42;CL:0000514!1.62e-08!42;CL:0002334!1.36e-07!12;CL:0002494!2.14e-07!16;CL:0000359!2.46e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000134;7.19e-12;55!CL:0000723;3.68e-11;61!CL:0000057;1.56e-10;73!CL:0000048;4.62e-10;58!CL:0002620;7.82e-10;23!CL:0002320;5.63e-09;188!CL:0000187;9.77e-09;55!CL:0000034;2.28e-08;69!CL:0002334;2.47e-08;12!CL:0002494;4.55e-08;16!CL:0000359;1.25e-07;32!CL:0000349;1.31e-07;19!CL:0000192;4.55e-07;43!CL:0000499;9.11e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.27e-26,76;CL:0000680,7.30e-16,58;CL:0000056,7.30e-16,58;CL:0000355,7.30e-16,58;CL:0000048,4.60e-15,427;CL:0000723,1.52e-14,433;CL:0000187,1.73e-14,55;CL:0000034,7.56e-14,441;CL:0000393,3.04e-11,61;CL:0000211,3.04e-11,61;CL:0000222,4.90e-10,121;CL:0002620,8.86e-10,23;CL:0002321,9.31e-10,250;CL:0000192,2.10e-09,43;CL:0000514,2.10e-09,43;CL:0002334,2.76e-08,12;CL:0002494,4.59e-08,16;CL:0000359,5.35e-08,32;CL:0000349,1.18e-07,19;CL:0000499,7.54e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000355;7.17e-09;58!CL:0000514;4.55e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.56e-19!143;UBERON:0000914!1.94e-17!83;UBERON:0002329!1.94e-17!83;UBERON:0003077!1.94e-17!83;UBERON:0003059!1.94e-17!83;UBERON:0007282!1.94e-17!83;UBERON:0009618!1.94e-17!83;UBERON:0007285!1.94e-17!83;UBERON:0003914!9.63e-17!118;UBERON:0004290!1.66e-15!70;UBERON:0002100!2.98e-14!216;UBERON:0004872!3.74e-14!84;UBERON:0000490!4.41e-14!138;UBERON:0000486!2.00e-13!82;UBERON:0001134!8.97e-13!61;UBERON:0002036!8.97e-13!61;UBERON:0003082!8.97e-13!61;UBERON:0002385!1.02e-12!63;UBERON:0001015!1.02e-12!63;UBERON:0000383!1.02e-12!63;UBERON:0002049!4.32e-12!79;UBERON:0007798!4.32e-12!79;UBERON:0000475!3.39e-11!365;UBERON:0000468!1.30e-10!659;UBERON:0004535!2.11e-10!110;UBERON:0000119!3.15e-10!312;UBERON:0002199!3.83e-10!45;UBERON:0002416!3.83e-10!45;UBERON:0001009!4.14e-10!113;UBERON:0000483!8.55e-10!309;UBERON:0000055!1.23e-09!69;UBERON:0001637!2.18e-09!42;UBERON:0003509!2.18e-09!42;UBERON:0004572!2.18e-09!42;UBERON:0001981!2.50e-09!60;UBERON:0007500!2.50e-09!60;UBERON:0004537!2.50e-09!60;UBERON:0006965!2.50e-09!60;UBERON:0003102!2.77e-09!95;UBERON:0003104!4.37e-09!238;UBERON:0009142!4.37e-09!238;UBERON:0002097!2.03e-08!40;UBERON:0000481!2.50e-08!347;UBERON:0000948!9.79e-08!24;UBERON:0005498!9.79e-08!24;UBERON:0004140!9.79e-08!24;UBERON:0009881!9.79e-08!24;UBERON:0004141!9.79e-08!24;UBERON:0003084!9.79e-08!24;UBERON:0007005!9.79e-08!24;UBERON:0004139!9.79e-08!24;UBERON:0004291!9.79e-08!24;UBERON:0004923!1.12e-07!57;UBERON:0004573!1.48e-07!33;UBERON:0004571!1.48e-07!33;UBERON:0000467!3.25e-07!625;UBERON:0000480!4.73e-07!626;UBERON:0007100!6.26e-07!27;UBERON:0001013!6.48e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;1.50e-08;198!UBERON:0002199;1.29e-07;46!UBERON:0002416;1.29e-07;46!UBERON:0002097;2.13e-07;41!UBERON:0001637;3.37e-07;42!UBERON:0003509;3.37e-07;42!UBERON:0004572;3.37e-07;42!UBERON:0000948;3.97e-07;22!UBERON:0004573;4.88e-07;33!UBERON:0004571;4.88e-07;33!UBERON:0001013;5.20e-07;14 | |||
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| ||
|short_description=p22@FN1 | |||
}} | }} |
Latest revision as of 04:05, 20 September 2015
Short description: | p22@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | -42bp_to_ENST00000471193_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.27e-26 | 76 |
muscle precursor cell | 7.30e-16 | 58 |
myoblast | 7.30e-16 | 58 |
multi-potent skeletal muscle stem cell | 7.30e-16 | 58 |
multi fate stem cell | 4.60e-15 | 427 |
somatic stem cell | 1.52e-14 | 433 |
muscle cell | 1.73e-14 | 55 |
stem cell | 7.56e-14 | 441 |
electrically responsive cell | 3.04e-11 | 61 |
electrically active cell | 3.04e-11 | 61 |
mesodermal cell | 4.90e-10 | 121 |
skin fibroblast | 8.86e-10 | 23 |
embryonic cell | 9.31e-10 | 250 |
smooth muscle cell | 2.10e-09 | 43 |
smooth muscle myoblast | 2.10e-09 | 43 |
preadipocyte | 2.76e-08 | 12 |
cardiocyte | 4.59e-08 | 16 |
vascular associated smooth muscle cell | 5.35e-08 | 32 |
extraembryonic cell | 1.18e-07 | 19 |
stromal cell | 7.54e-07 | 28 |