FFCP PHASE1:Hg19::chr2:216264027..216264048,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:216264027..216264048,-
|short_description=p34@FN1
|description=CAGE_peak_34_at_FN1_5end
|association_with_transcript=0bp_to_BX640920_5end
|EntrezGene=2335...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt=P02751 | |UniProt=P02751 | ||
|association_with_transcript=0bp_to_BX640920_5end | |||
|cluster_id=chr2:216264027..216264048,- | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_34_at_FN1_5end | |||
|id=chr2:216264027..216264048,- | |||
|ontology_enrichment_celltype=CL:0000055!8.51e-32!180;CL:0000057!4.30e-25!75;CL:0002371!3.52e-15!591;CL:0000144!1.91e-13!625;CL:0000680!2.48e-12!57;CL:0000056!2.48e-12!57;CL:0000355!2.48e-12!57;CL:0000183!5.64e-12!59;CL:0000187!3.83e-11!54;CL:0000222!2.15e-10!119;CL:0002620!1.05e-09!23;CL:0000220!1.10e-09!246;CL:0000048!2.01e-09!430;CL:0000723!2.47e-09!436;CL:0002321!2.87e-09!248;CL:0000393!1.04e-08!60;CL:0000211!1.04e-08!60;CL:0000034!1.16e-08!444;CL:0002334!1.78e-08!12;CL:0000548!7.91e-08!679;CL:0000004!7.91e-08!679;CL:0000255!7.91e-08!679;CL:0002494!1.52e-07!16;CL:0000012!2.34e-07!682;CL:0000192!7.40e-07!42;CL:0000514!7.40e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.38e-14;55!CL:0000723;4.16e-13;61!CL:0000048;4.34e-12;58!CL:0000057;4.90e-10;73!CL:0002620;5.85e-10;23!CL:0002320;8.26e-10;188!CL:0000034;8.90e-10;69!CL:0002334;9.79e-10;12!CL:0000349;5.09e-09;19!CL:0000499;3.22e-08;28!CL:0002494;5.28e-08;16!CL:0000187;1.11e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.32e-26,76;CL:0000048,3.36e-20,427;CL:0000723,8.21e-20,433;CL:0000034,1.33e-18,441;CL:0000680,1.14e-13,58;CL:0000056,1.14e-13,58;CL:0000355,1.14e-13,58;CL:0000187,2.76e-12,55;CL:0002320,3.69e-11,361;CL:0002620,6.29e-10,23;CL:0002334,9.36e-10,12;CL:0000393,1.14e-09,61;CL:0000211,1.14e-09,61;CL:0000134,1.79e-09,354;CL:0000349,4.51e-09,19;CL:0000499,3.46e-08,28;CL:0002494,6.32e-08,16;CL:0000219,2.16e-07,386;CL:0000192,2.44e-07,43;CL:0000514,2.44e-07,43;CL:0000222,8.32e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000355;1.12e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!9.30e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.08e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.71e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0005256!2.73e-15!143;UBERON:0000914!5.50e-15!83;UBERON:0002329!5.50e-15!83;UBERON:0003077!5.50e-15!83;UBERON:0003059!5.50e-15!83;UBERON:0007282!5.50e-15!83;UBERON:0009618!5.50e-15!83;UBERON:0007285!5.50e-15!83;UBERON:0004290!1.82e-13!70;UBERON:0000486!9.61e-12!82;UBERON:0002199!1.07e-11!45;UBERON:0002416!1.07e-11!45;UBERON:0004872!3.00e-11!84;UBERON:0003914!4.55e-11!118;UBERON:0000490!6.03e-11!138;UBERON:0002385!9.62e-11!63;UBERON:0001015!9.62e-11!63;UBERON:0000383!9.62e-11!63;UBERON:0001134!1.00e-10!61;UBERON:0002036!1.00e-10!61;UBERON:0003082!1.00e-10!61;UBERON:0002049!1.10e-10!79;UBERON:0007798!1.10e-10!79;UBERON:0003102!1.74e-10!95;UBERON:0002097!6.84e-10!40;UBERON:0002100!9.49e-10!216;UBERON:0001009!2.17e-09!113;UBERON:0004535!2.70e-09!110;UBERON:0000468!3.34e-08!659;UBERON:0000475!3.40e-08!365;UBERON:0000055!4.37e-08!69;UBERON:0000119!7.52e-08!312;UBERON:0001981!1.73e-07!60;UBERON:0007500!1.73e-07!60;UBERON:0004537!1.73e-07!60;UBERON:0006965!1.73e-07!60;UBERON:0000483!1.89e-07!309;UBERON:0004923!1.98e-07!57;UBERON:0001637!2.42e-07!42;UBERON:0003509!2.42e-07!42;UBERON:0004572!2.42e-07!42;UBERON:0001013!6.17e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;2.53e-09;198!UBERON:0002199;4.58e-08;46!UBERON:0002416;4.58e-08;46!UBERON:0002097;5.70e-08;41!UBERON:0000478;1.05e-07;24!UBERON:0001013;2.13e-07;14!UBERON:0002385;8.08e-07;31!UBERON:0001015;8.08e-07;31!UBERON:0000383;8.08e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.54e-14,73;UBERON:0002329,1.70e-14,71;UBERON:0003059,1.70e-14,71;UBERON:0007282,1.70e-14,71;UBERON:0004290,1.70e-14,71;UBERON:0009618,1.70e-14,71;UBERON:0003077,4.94e-14,72;UBERON:0007285,4.94e-14,72;UBERON:0005256,6.96e-14,122;UBERON:0007503,1.06e-13,78;UBERON:0003104,1.03e-12,160;UBERON:0009142,1.03e-12,160;UBERON:0000486,2.34e-12,83;UBERON:0000490,5.76e-12,148;UBERON:0002199,7.17e-12,46;UBERON:0002416,7.17e-12,46;UBERON:0002384,7.22e-12,371;UBERON:0001134,9.33e-12,62;UBERON:0002036,9.33e-12,62;UBERON:0003082,9.33e-12,62;UBERON:0002385,1.55e-11,64;UBERON:0001015,1.55e-11,64;UBERON:0000383,1.55e-11,64;UBERON:0000926,7.91e-10,315;UBERON:0004120,7.91e-10,315;UBERON:0006603,7.91e-10,315;UBERON:0002097,8.12e-10,41;UBERON:0003102,2.24e-09,99;UBERON:0004872,2.96e-09,83;UBERON:0003914,2.84e-08,117;UBERON:0004923,3.80e-08,66;UBERON:0002049,7.35e-08,78;UBERON:0007798,7.35e-08,78;UBERON:0000478,9.50e-08,24;UBERON:0004535,1.01e-07,109;UBERON:0001637,2.12e-07,42;UBERON:0003509,2.12e-07,42;UBERON:0004572,2.12e-07,42;UBERON:0001013,2.24e-07,14;UBERON:0001009,4.50e-07,112;UBERON:0002100,4.59e-07,199;UBERON:0005631,7.05e-07,14;UBERON:0000158,7.05e-07,14 | |||
|phase1_expression=12.1724514111273,42.8201047781966,7.75249222527841,18.0131937035635,4.91657203870017,11.3404008133048,5.06599756336621,5.68547886084148,1.30592814099919,1.22866968250754,0,4.58726881473362,6.85794143393979,3.83675694176145,4.63956326019082,4.70627602516243,8.43772339233568,9.49403117503585,6.8310591830671,0.984968464614303,2.65200898617529,2.82109249330279,0.572471974262113,0.684372125364421,0.753255837568817,0.0764134057479513,0,0.0787107813136792,0,0,0.464448369948228,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.5710299470943,14.0847180537764,4.98663991189768,3.2529523714611,4.01070328508712,8.40109809972778,38.1737254584528,134.311224203528,0.850813354476611,3.99112915432615,2.19586964232815,0.196468613246569,0,0,0,0,0.132957960518865,0,0,0,0.39752481473341,0,0.347140501607594,3.95715559346807,2.93649605346934,5.77747888074142,1.04497483268405,1.03366703667732,0.71153252537342,1.00416183829401,0.805658634218294,0,1.95249646038536,0,12.1521292182264,0.535798369704479,0.44905874525234,0.675668882899933,0,1.89853131913626,1.09921046358244,0,0,0,29.8183171017191,11.143485026483,19.7289679411696,37.5755973180946,10.6400514659507,6.16745360156538,8.5399196583764,20.2267389702071,8.09148692039392,6.33140158727534,4.41347138406339,17.1033893238772,18.43762958336,1.17160715916898,11.8620829195522,0.570471821544449,11.3580997219369,3.99277295388801,3.0755859429945,1.54495887372473,2.44985005505872,3.56219520204127,2.9964476540972,1.18800285728205,9.1488763833066,3.64064544775211,5.03032699271367,1.85169725349473,4.8796222750066,1.93944880838928,2.63386572528503,8.58165828237255,5.25833206173089,4.76415169272088,15.7862879406199,6.83383644219416,12.080118366095,13.2040082277137,7.21367704669072,19.3230405034222,3.53622027030021,10.801685263441,10.0360115316035,25.4958111986556,6.71964260088785,8.56724101139703,20.9455659584802,5.74286959897549,3.22165125389926,0.193260853163297,1.90922284413584,0.286804595389004,0,0,0.464775771478074,0.207322110030741,1.26160425437814,0,9.38697193978896,24.4431556513296,5.52539685409922,27.8620756819187,16.6032280784005,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,3.2925920906512,7.3504355692771,1.26755034821831,5.89696330006576,0,0,1.8448265781467,1.54411029268673,3.40225884766739,1.1240175325762,0.201057944823262,0.0925884451585296,0.977424915930974,0,1.44331342025273,0,5.04857385214033,1.15493158208859,2.77791307545966,1.71228737011138,0,0,0,0,0,0,1.84780341018745,0.425325291727159,8.59761817947344,4.65014301622339,2.68367875415648,0,0,0,0,0,0,0,1.17217447210047,0,3.08482478109971,0.300343057843917,0,2.24262168690721,4.3596006883328,1.98013371716565,3.87815147273333,39.3422090437071,9.298330278116,2.12750493267896,4.16029747645464,5.91576960802927,5.67396528093113,4.79559922228979,4.00338382242813,10.3098105024374,4.93944202068461,3.58309802723109,1.77695974371273,3.95975936466715,2.71295439353627,0.871533458600294,0.99972991182057,0,0,2.10833939483032,8.14724508671381,9.18895486672911,9.98458335285029,6.65994010670864,16.2326294814803,4.83464600747718,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,6.25726607767613,14.5049451107306,4.6115054028955,21.0050570146115,59.2384242806577,13.8778125229863,14.1741112141183,3.00946099727719,0,7.24311499047534,5.31380478828349,7.74350507875153,5.21301686808497,4.11182430671755,6.51972505240626,0,0,0,0,6.65741758041988,7.86214762657169,19.1043012020458,22.7123720466332,51.6414573756855,11.6606625822688,14.3278029738677,20.7501558275254,11.8734453155993,21.4351474385691,13.3171293984845,3.6135948646076,9.8658341544888,9.18061989833678,1.69203229428271,19.6496340897219,0,2.52591785962135,6.3731908802351,5.90059867317409,0.902399225814824,1.15523005656622,0.784349769176855,0,1.16106791782163,0,0.510281115829547,1.29549549661284,1.54227252690289,1.35473218771926,2.50844886927427,0,0,0.895499018888713,0,0,0,0.328014645699706,0.325378394664303,0.721287081534056,0.366277859273374,0,2.29706215198469,1.30012049207304,3.21367859688319,3.19013370364003,3.69716681075147,6.60065801322357,4.68644346447404,11.1717054663005,17.5470199636217,5.45450415463046,4.62966585363034,7.76839102196597,9.80169343562041,4.33883222481586,6.2717824130441,6.04299214086472,39.9811680474913,1.3940745403212,2.15623506123262,1.59691809095107,0,1.8532421910392,1.00187420719394,1.86079184679834,6.01120906965579,3.62197368455267,1.02359116524534,3.42351190427136,1.27281299170375,0.78494864019923,1.61885211824983,1.09814811894422,2.23843564456804,0.808729926293264,3.17020642346017,2.10629228119491,0,4.38684281336312,0,3.13949796238367,4.52497382251881,3.39024349860728,0,7.96126770289464,4.38450885253763,5.78775534266688,6.55894752046633,3.65238678532867,1.54911749049875,1.12678241012897,2.00775893085672,4.32295780457733,4.63672366925625,0.354761064070598,7.38876723541824,15.8061548620753,0.3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|phase1_expression=12.1724514111273,42.8201047781966,7.75249222527841,18.0131937035635,4.91657203870017,11.3404008133048,5.06599756336621,5.68547886084148,1.30592814099919,1.22866968250754,0,4.58726881473362,6.85794143393979,3.83675694176145,4.63956326019082,4.70627602516243,8.43772339233568,9.49403117503585,6.8310591830671,0.984968464614303,2.65200898617529,2.82109249330279,0.572471974262113,0.684372125364421,0.753255837568817,0.0764134057479513,0,0.0787107813136792,0,0,0.464448369948228,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.5710299470943,14.0847180537764,4.98663991189768,3.2529523714611,4.01070328508712,8.40109809972778,38.1737254584528,134.311224203528,0.850813354476611,3.99112915432615,2.19586964232815,0.196468613246569,0,0,0,0,0.132957960518865,0,0,0,0.39752481473341,0,0.347140501607594,3.95715559346807,2.93649605346934,5.77747888074142,1.04497483268405,1.03366703667732,0.71153252537342,1.00416183829401,0.805658634218294,0,1.95249646038536,0,12.1521292182264,0.535798369704479,0.44905874525234,0.675668882899933,0,1.89853131913626,1.09921046358244,0,0,0,29.8183171017191,11.143485026483,19.7289679411696,37.5755973180946,10.6400514659507,6.16745360156538,8.5399196583764,20.2267389702071,8.09148692039392,6.33140158727534,4.41347138406339,17.1033893238772,18.43762958336,1.17160715916898,11.8620829195522,0.570471821544449,11.3580997219369,3.99277295388801,3.0755859429945,1.54495887372473,2.44985005505872,3.56219520204127,2.9964476540972,1.18800285728205,9.1488763833066,3.64064544775211,5.03032699271367,1.85169725349473,4.8796222750066,1.93944880838928,2.63386572528503,8.58165828237255,5.25833206173089,4.76415169272088,15.7862879406199,6.83383644219416,12.080118366095,13.2040082277137,7.21367704669072,19.3230405034222,3.53622027030021,10.801685263441,10.0360115316035,25.4958111986556,6.71964260088785,8.56724101139703,20.9455659584802,5.74286959897549,3.22165125389926,0.193260853163297,1.90922284413584,0.286804595389004,0,0,0.464775771478074,0.207322110030741,1.26160425437814,0,9.38697193978896,24.4431556513296,5.52539685409922,27.8620756819187,16.6032280784005,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,3.2925920906512,7.3504355692771,1.26755034821831,5.89696330006576,0,0,1.8448265781467,1.54411029268673,3.40225884766739,1.1240175325762,0.201057944823262,0.0925884451585296,0.977424915930974,0,1.44331342025273,0,5.04857385214033,1.15493158208859,2.77791307545966,1.71228737011138,0,0,0,0,0,0,1.84780341018745,0.425325291727159,8.59761817947344,4.65014301622339,2.68367875415648,0,0,0,0,0,0,0,1.17217447210047,0,3.08482478109971,0.300343057843917,0,2.24262168690721,4.3596006883328,1.98013371716565,3.87815147273333,39.3422090437071,9.298330278116,2.12750493267896,4.16029747645464,5.91576960802927,5.67396528093113,4.79559922228979,4.00338382242813,10.3098105024374,4.93944202068461,3.58309802723109,1.77695974371273,3.95975936466715,2.71295439353627,0.871533458600294,0.99972991182057,0,0,2.10833939483032,8.14724508671381,9.18895486672911,9.98458335285029,6.65994010670864,16.2326294814803,4.83464600747718,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,6.25726607767613,14.5049451107306,4.6115054028955,21.0050570146115,59.2384242806577,13.8778125229863,14.1741112141183,3.00946099727719,0,7.24311499047534,5.31380478828349,7.74350507875153,5.21301686808497,4.11182430671755,6.51972505240626,0,0,0,0,6.65741758041988,7.86214762657169,19.1043012020458,22.7123720466332,51.6414573756855,11.6606625822688,14.3278029738677,20.7501558275254,11.8734453155993,21.4351474385691,13.3171293984845,3.6135948646076,9.8658341544888,9.18061989833678,1.69203229428271,19.6496340897219,0,2.52591785962135,6.3731908802351,5.90059867317409,0.902399225814824,1.15523005656622,0.784349769176855,0,1.16106791782163,0,0.510281115829547,1.29549549661284,1.54227252690289,1.35473218771926,2.50844886927427,0,0,0.895499018888713,0,0,0,0.328014645699706,0.325378394664303,0.721287081534056,0.366277859273374,0,2.29706215198469,1.30012049207304,3.21367859688319,3.19013370364003,3.69716681075147,6.60065801322357,4.68644346447404,11.1717054663005,17.5470199636217,5.45450415463046,4.62966585363034,7.76839102196597,9.80169343562041,4.33883222481586,6.2717824130441,6.04299214086472,39.9811680474913,1.3940745403212,2.15623506123262,1.59691809095107,0,1.8532421910392,1.00187420719394,1.86079184679834,6.01120906965579,3.62197368455267,1.02359116524534,3.42351190427136,1.27281299170375,0.78494864019923,1.61885211824983,1.09814811894422,2.23843564456804,0.808729926293264,3.17020642346017,2.10629228119491,0,4.38684281336312,0,3.13949796238367,4.52497382251881,3.39024349860728,0,7.96126770289464,4.38450885253763,5.78775534266688,6.55894752046633,3.65238678532867,1.54911749049875,1.12678241012897,2.00775893085672,4.32295780457733,4.63672366925625,0.354761064070598,7.38876723541824,15.8061548620753,0.3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| ||
|short_description=p34@FN1 | |||
}} | }} |
Latest revision as of 03:29, 20 September 2015
Short description: | p34@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 0bp_to_BX640920_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | P02751 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.32e-26 | 76 |
multi fate stem cell | 3.36e-20 | 427 |
somatic stem cell | 8.21e-20 | 433 |
stem cell | 1.33e-18 | 441 |
muscle precursor cell | 1.14e-13 | 58 |
myoblast | 1.14e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.14e-13 | 58 |
muscle cell | 2.76e-12 | 55 |
connective tissue cell | 3.69e-11 | 361 |
skin fibroblast | 6.29e-10 | 23 |
preadipocyte | 9.36e-10 | 12 |
electrically responsive cell | 1.14e-09 | 61 |
electrically active cell | 1.14e-09 | 61 |
mesenchymal cell | 1.79e-09 | 354 |
extraembryonic cell | 4.51e-09 | 19 |
stromal cell | 3.46e-08 | 28 |
cardiocyte | 6.32e-08 | 16 |
motile cell | 2.16e-07 | 386 |
smooth muscle cell | 2.44e-07 | 43 |
smooth muscle myoblast | 2.44e-07 | 43 |
mesodermal cell | 8.32e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.71e-07 | 14 |