FFCP PHASE1:Mm9::chr4:155400413..155400480,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21936 | |EntrezGene=21936 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=467 | |MCL_coexpression_id=467 | ||
|TSSclassifier=NA | |||
|UniProt=O35714,B1ASL6,E9PW25,Q540M6,B1ASL4 | |UniProt=O35714,B1ASL6,E9PW25,Q540M6,B1ASL4 | ||
|association_with_transcript=0bp_to_ENSMUST00000040274,ENSMUST00000122001,ENSMUST00000141260,ENSMUST00000166209,NM_009400,NM_021985,uc008wfw.1,uc008wfx.1,uc008wfy.1_5end | |association_with_transcript=0bp_to_ENSMUST00000040274,ENSMUST00000122001,ENSMUST00000141260,ENSMUST00000166209,NM_009400,NM_021985,uc008wfw.1,uc008wfx.1,uc008wfy.1_5end | ||
|cluster_id=chr4:155400413..155400480,+ | |||
|description=CAGE_peak_1_at_Tnfrsf18_5end | |description=CAGE_peak_1_at_Tnfrsf18_5end | ||
|id=chr4:155400413..155400480,+ | |id=chr4:155400413..155400480,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.53e-11!32;CL:0002032!1.53e-11!32;CL:0000037!1.53e-11!32;CL:0000566!1.53e-11!32;CL:0000837!1.53e-11!32;CL:0002031!1.81e-10!25;CL:0000838!1.56e-09!12;CL:0000084!5.01e-09!11;CL:0000827!5.01e-09!11;CL:0000542!3.37e-08!13;CL:0000051!3.37e-08!13;CL:0000791!5.75e-08!9;CL:0000789!5.75e-08!9;CL:0002420!5.75e-08!9;CL:0002419!5.75e-08!9;CL:0000790!5.75e-08!9;CL:0000624!2.85e-07!8 | |ontology_enrichment_celltype=CL:0000988!1.53e-11!32;CL:0002032!1.53e-11!32;CL:0000037!1.53e-11!32;CL:0000566!1.53e-11!32;CL:0000837!1.53e-11!32;CL:0002031!1.81e-10!25;CL:0000838!1.56e-09!12;CL:0000084!5.01e-09!11;CL:0000827!5.01e-09!11;CL:0000542!3.37e-08!13;CL:0000051!3.37e-08!13;CL:0000791!5.75e-08!9;CL:0000789!5.75e-08!9;CL:0002420!5.75e-08!9;CL:0002419!5.75e-08!9;CL:0000790!5.75e-08!9;CL:0000624!2.85e-07!8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.49e-19,32;CL:0002032,2.49e-19,32;CL:0000037,2.49e-19,32;CL:0000837,2.49e-19,32;CL:0002031,6.32e-18,25;CL:0000838,1.97e-15,12;CL:0000084,1.50e-14,11;CL:0000827,1.50e-14,11;CL:0000542,6.37e-14,13;CL:0000051,6.37e-14,13;CL:0000791,1.04e-12,9;CL:0000789,1.04e-12,9;CL:0002420,1.04e-12,9;CL:0002419,1.04e-12,9;CL:0000790,1.04e-12,9;CL:0002320,5.97e-12,46;CL:0000134,5.97e-12,46;CL:0000624,1.66e-11,8;CL:0000738,3.49e-11,17;CL:0002087,3.49e-11,17;CL:0000219,5.56e-10,54;CL:0000893,5.45e-09,6;CL:0002489,5.45e-09,6;CL:0000898,5.45e-09,6;CL:0000809,5.45e-09,6;CL:0000810,5.45e-09,6;CL:0000895,5.45e-09,6;CL:0000808,5.45e-09,6;CL:0000894,5.45e-09,6;CL:0000806,5.45e-09,6;CL:0000807,5.45e-09,6;CL:0000805,5.45e-09,6;CL:0002425,5.45e-09,6;CL:0002436,5.45e-09,6;CL:0002427,5.45e-09,6;CL:0002428,5.45e-09,6;CL:0002429,5.45e-09,6;CL:0002433,5.45e-09,6;CL:0002431,5.45e-09,6;CL:0002432,5.45e-09,6;CL:0000049,1.09e-07,19;CL:0000050,4.96e-07,9;CL:0000553,8.21e-07,6;CL:0000556,8.21e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.44e-13!48;UBERON:0002390!1.70e-12!45;UBERON:0003061!1.70e-12!45;UBERON:0004177!4.12e-11!29;UBERON:0002370!3.03e-09!23;UBERON:0000974!3.03e-09!23;UBERON:0004807!3.03e-09!23;UBERON:0005058!3.03e-09!23;UBERON:0003351!3.03e-09!23;UBERON:0009113!3.03e-09!23;UBERON:0003295!3.03e-09!23;UBERON:0009722!3.03e-09!23;UBERON:0005562!3.03e-09!23;UBERON:0007690!3.03e-09!23;UBERON:0000072!4.76e-09!27;UBERON:0006562!2.19e-08!24;UBERON:0003408!2.19e-08!24;UBERON:0001557!2.19e-08!24;UBERON:0001042!2.19e-08!24;UBERON:0008814!2.19e-08!24;UBERON:0009145!2.19e-08!24;UBERON:0000065!6.68e-08!41;UBERON:0003081!1.56e-07!88;UBERON:0001004!2.29e-07!42;UBERON:0002405!9.68e-07!70 | |ontology_enrichment_uberon=UBERON:0002193!1.44e-13!48;UBERON:0002390!1.70e-12!45;UBERON:0003061!1.70e-12!45;UBERON:0004177!4.12e-11!29;UBERON:0002370!3.03e-09!23;UBERON:0000974!3.03e-09!23;UBERON:0004807!3.03e-09!23;UBERON:0005058!3.03e-09!23;UBERON:0003351!3.03e-09!23;UBERON:0009113!3.03e-09!23;UBERON:0003295!3.03e-09!23;UBERON:0009722!3.03e-09!23;UBERON:0005562!3.03e-09!23;UBERON:0007690!3.03e-09!23;UBERON:0000072!4.76e-09!27;UBERON:0006562!2.19e-08!24;UBERON:0003408!2.19e-08!24;UBERON:0001557!2.19e-08!24;UBERON:0001042!2.19e-08!24;UBERON:0008814!2.19e-08!24;UBERON:0009145!2.19e-08!24;UBERON:0000065!6.68e-08!41;UBERON:0003081!1.56e-07!88;UBERON:0001004!2.29e-07!42;UBERON:0002405!9.68e-07!70 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.06e-21,48;UBERON:0002405,8.06e-21,48;UBERON:0002390,1.09e-19,45;UBERON:0003061,1.09e-19,45;UBERON:0004177,4.61e-18,29;UBERON:0005057,4.61e-18,29;UBERON:0002370,5.91e-17,23;UBERON:0000974,5.91e-17,23;UBERON:0004807,5.91e-17,23;UBERON:0005058,5.91e-17,23;UBERON:0003351,5.91e-17,23;UBERON:0009113,5.91e-17,23;UBERON:0003295,5.91e-17,23;UBERON:0009722,5.91e-17,23;UBERON:0005562,5.91e-17,23;UBERON:0007690,5.91e-17,23;UBERON:0000077,3.18e-16,35;UBERON:0000072,4.62e-16,27;UBERON:0006562,5.74e-16,24;UBERON:0003408,5.74e-16,24;UBERON:0001557,5.74e-16,24;UBERON:0001042,5.74e-16,24;UBERON:0008814,5.74e-16,24;UBERON:0009145,5.74e-16,24;UBERON:0000065,5.07e-12,41;UBERON:0002384,5.97e-12,46;UBERON:0001004,1.50e-11,42;UBERON:0003081,1.23e-09,87;UBERON:0007811,1.54e-08,36;UBERON:0000926,7.57e-08,120;UBERON:0004120,7.57e-08,120;UBERON:0006603,7.57e-08,120;UBERON:0000153,5.62e-07,43 | |||
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| ||
|short_description=p1@Tnfrsf18 | |short_description=p1@Tnfrsf18 | ||
}} | }} |
Latest revision as of 20:33, 26 September 2015
Short description: | p1@Tnfrsf18 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tnfrsf18_5end |
Coexpression cluster: | MCL_coexpression_mm9:467 |
Association with transcript: | 0bp_to_ENSMUST00000040274, ENSMUST00000122001, ENSMUST00000141260, ENSMUST00000166209, NM_009400, NM_021985, uc008wfw.1, uc008wfx.1, uc008wfy.1_5end |
EntrezGene: | Tnfrsf18 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 8.06e-21 | 48 |
immune system | 8.06e-21 | 48 |
hematopoietic system | 1.09e-19 | 45 |
blood island | 1.09e-19 | 45 |
hemopoietic organ | 4.61e-18 | 29 |
immune organ | 4.61e-18 | 29 |
thymus | 5.91e-17 | 23 |
neck | 5.91e-17 | 23 |
respiratory system epithelium | 5.91e-17 | 23 |
hemolymphoid system gland | 5.91e-17 | 23 |
pharyngeal epithelium | 5.91e-17 | 23 |
thymic region | 5.91e-17 | 23 |
pharyngeal gland | 5.91e-17 | 23 |
entire pharyngeal arch endoderm | 5.91e-17 | 23 |
thymus primordium | 5.91e-17 | 23 |
early pharyngeal endoderm | 5.91e-17 | 23 |
mixed endoderm/mesoderm-derived structure | 3.18e-16 | 35 |
segment of respiratory tract | 4.62e-16 | 27 |
pharynx | 5.74e-16 | 24 |
gland of gut | 5.74e-16 | 24 |
upper respiratory tract | 5.74e-16 | 24 |
chordate pharynx | 5.74e-16 | 24 |
pharyngeal arch system | 5.74e-16 | 24 |
pharyngeal region of foregut | 5.74e-16 | 24 |
respiratory tract | 5.07e-12 | 41 |
connective tissue | 5.97e-12 | 46 |
respiratory system | 1.50e-11 | 42 |
lateral plate mesoderm | 1.23e-09 | 87 |
craniocervical region | 1.54e-08 | 36 |
mesoderm | 7.57e-08 | 120 |
mesoderm-derived structure | 7.57e-08 | 120 |
presumptive mesoderm | 7.57e-08 | 120 |
anterior region of body | 5.62e-07 | 43 |