FFCP PHASE1:Mm9::chr1:175872576..175872603,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100044071,100048583,100504287,15950 | |EntrezGene=100044071,100048583,100504287,15950 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=918 | |MCL_coexpression_id=918 | ||
|TSSclassifier=NA | |||
|UniProt=O35368,E9PUG6 | |UniProt=O35368,E9PUG6 | ||
|association_with_transcript=0bp_to_ENSMUST00000042228,ENSMUST00000081216,ENSMUST00000128430,ENSMUST00000140143,NM_008328,uc007dsc.1,uc007dsd.1,uc007dse.1_5end | |association_with_transcript=0bp_to_ENSMUST00000042228,ENSMUST00000081216,ENSMUST00000128430,ENSMUST00000140143,NM_008328,uc007dsc.1,uc007dsd.1,uc007dse.1_5end | ||
|cluster_id=chr1:175872576..175872603,- | |||
|description=CAGE_peak_1_at_Gm16340_5end,CAGE_peak_1_at_Ifi203_5end,CAGE_peak_1_at_LOC100044071_5end,CAGE_peak_1_at_LOC100048583_5end | |description=CAGE_peak_1_at_Gm16340_5end,CAGE_peak_1_at_Ifi203_5end,CAGE_peak_1_at_LOC100044071_5end,CAGE_peak_1_at_LOC100048583_5end | ||
|id=chr1:175872576..175872603,- | |id=chr1:175872576..175872603,- | ||
|ontology_enrichment_celltype=CL:0000988!1.56e-08!32;CL:0002032!1.56e-08!32;CL:0000037!1.56e-08!32;CL:0000566!1.56e-08!32;CL:0000837!1.56e-08!32;CL:0002320!9.33e-08!46;CL:0000134!9.33e-08!46;CL:0002031!2.56e-07!25;CL:0000838!4.49e-07!12 | |ontology_enrichment_celltype=CL:0000988!1.56e-08!32;CL:0002032!1.56e-08!32;CL:0000037!1.56e-08!32;CL:0000566!1.56e-08!32;CL:0000837!1.56e-08!32;CL:0002320!9.33e-08!46;CL:0000134!9.33e-08!46;CL:0002031!2.56e-07!25;CL:0000838!4.49e-07!12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.80e-11,32;CL:0002032,5.80e-11,32;CL:0000037,5.80e-11,32;CL:0000837,5.80e-11,32;CL:0002320,3.84e-09,46;CL:0000134,3.84e-09,46;CL:0000838,6.52e-09,12;CL:0002031,9.04e-09,25;CL:0000738,3.59e-08,17;CL:0002087,3.59e-08,17;CL:0000084,5.33e-08,11;CL:0000827,5.33e-08,11;CL:0000542,6.12e-08,13;CL:0000051,6.12e-08,13;CL:0000791,4.61e-07,9;CL:0000789,4.61e-07,9;CL:0002420,4.61e-07,9;CL:0002419,4.61e-07,9;CL:0000790,4.61e-07,9;CL:0000219,4.90e-07,54 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.93e-13!70;UBERON:0002193!5.36e-13!48;UBERON:0002390!2.32e-11!45;UBERON:0003061!2.32e-11!45;UBERON:0000926!6.10e-11!193;UBERON:0004120!6.10e-11!193;UBERON:0006603!6.10e-11!193;UBERON:0003081!7.13e-10!88;UBERON:0002384!9.33e-08!46;UBERON:0005057!3.16e-07!51;UBERON:0003104!6.04e-07!131;UBERON:0009142!6.04e-07!131;UBERON:0004177!8.70e-07!29 | |ontology_enrichment_uberon=UBERON:0002405!2.93e-13!70;UBERON:0002193!5.36e-13!48;UBERON:0002390!2.32e-11!45;UBERON:0003061!2.32e-11!45;UBERON:0000926!6.10e-11!193;UBERON:0004120!6.10e-11!193;UBERON:0006603!6.10e-11!193;UBERON:0003081!7.13e-10!88;UBERON:0002384!9.33e-08!46;UBERON:0005057!3.16e-07!51;UBERON:0003104!6.04e-07!131;UBERON:0009142!6.04e-07!131;UBERON:0004177!8.70e-07!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.11e-15,48;UBERON:0002405,3.11e-15,48;UBERON:0002390,5.31e-13,45;UBERON:0003061,5.31e-13,45;UBERON:0003081,3.01e-09,87;UBERON:0002384,3.84e-09,46;UBERON:0000077,5.49e-09,35;UBERON:0004177,6.40e-09,29;UBERON:0005057,6.40e-09,29;UBERON:0000926,3.90e-08,120;UBERON:0004120,3.90e-08,120;UBERON:0006603,3.90e-08,120;UBERON:0006562,2.75e-07,24;UBERON:0001557,2.75e-07,24;UBERON:0001042,2.75e-07,24;UBERON:0008814,2.75e-07,24;UBERON:0009145,2.75e-07,24;UBERON:0003408,3.71e-07,24;UBERON:0001041,7.60e-07,80;UBERON:0002370,8.56e-07,23;UBERON:0000974,8.56e-07,23;UBERON:0004807,8.56e-07,23;UBERON:0005058,8.56e-07,23;UBERON:0003351,8.56e-07,23;UBERON:0009113,8.56e-07,23;UBERON:0003295,8.56e-07,23;UBERON:0009722,8.56e-07,23;UBERON:0005562,8.56e-07,23;UBERON:0007690,8.56e-07,23 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0,78.1196106821536,4.36445038670167,8.42632294759177,1.54096171402954,0.478632953972018,45.7105948916319,89.9555940891483,0.666219523631325,6.07425802169478,0.699561878128147,35.9626868508391,38.9404991440298,22.9170411970936,1.78590909317247,1.29078236561151,4.96279599363977,4.31979541542198,4.35877634027623,0,0,0.215471232685889,1.14014051673824,0.756090389279792,0.443461021310609,0,0,0,0,0,0,0,0.7813353445238,1.57057123192139,0,0,1.45653105909346,1.38486499773135,1.4192770370732,0.917733760808408,0.782391344348039,0,0.219686182734472,0,0.839918529752175,0,21.643956181448,15.2326049822382,23.8626597391149,0.514518872071894,0.85960031981627,0,0,0,0,0.338844532069132,0,1.7997994345628,1.97773272513395,0.7104801149461,0.299600110518405,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.153606533256243,0.263772575460388,0.0914876436024097,0,0,0,0.30559649555362,0,0.142371680799103,0,1.4387976733305,0.453429360640713,28.4067198927644,12.0459342777394,0,0,0,0.448026887097336,4.63466586434781,1.53387290320252,0.779358013808606,0.70667914902068,0,0,0,0,0,0,0,2.51204535381932,68.3596012828533,2.82040064223167,0.173485326766136,0.608930956624282,0,0.904335843315735,1.05829836422134,1.38233250462643,0.247194967734374,5.63937491987655,12.3845477272982,0.485300549842228,1.32504911076236,2.90925151881133,0,0.292780797011547,0,0.510914110417183,3.47463861067169,2.39961092397363,2.28726408731516,0,0,0.125654352112864,0,0,0.83115217823824,0,0.407357455401265,2.11491850037158,0.758168275301024,0.631325567659422,0,0,0,0,0.136072998302656,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,2.80885274925294,2.31613116403244,1.13665399758237,0,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0.465067889500816,0.536546802799238,0.350296027101508,0.16455984991348,0.985004784474571,2.43206428637567,3.07019973593198,3.29325172936576,2.81833479396781,0.420579897128254,0.205809224758569,0,2.11560453330835,0,0,0.257734922644187,0.403367049246685,0.22237804384487,0.760902504450237,0.474529061544512,0.164698954724011,0.251335208800269,0.596869416123452,0.19496408711912,1.79763881730844,0.864552199498777,0.398282546508734,0,0,0,0,0.581857461502877,0.140271639780637,1.07502113111237,2.65698266363284,1.72698600625512,1.1105744752962,3.26097889795864,0.166845105716094,0,0,0.811440485554012,0.241177159752417,0.25462585178142,2.87696137450811,0.972811360650212,0.274561413188081,5.75072826109418,2.60498663367952,3.12037673114561,2.02063102357689,2.51156378930677,2.8946611281802,8.49864674766381,0,0,0,0.234690248288502,0.502518772325447,1.42826184531608,0.195133647857799,1.7339865851681,1.55025282754142,0.956728611944923,4.26044618260919,4.31712454664739,1.73578870297814,94.9985088817415,78.3224184698942,2.95058563811422,3.86311444826625,0.321101179975584,0,0.819674726883377,2.01976741763498,0,0,0,0,0.222798674082394,0,0,0,0,0.642642632843614,3.12268187458191,0.35613120733451,0.325773918707152,3.79431282836832,3.98235415019888,0,0,0,0,1.84461088766356,1.29214146584111,2.54473610634254,0,0.948110273807448,2.10837217149998,2.06271086496374,0.680879211507576,0,0,0,0.354680467284547,0.356737635204141,0,0,0.938686832254841,0,0.220528398054962,2.63818004706368,0.807322133479528,0.361877549568935,0.596861720015682,0.164140899745061,0.291480836629851,0.556275906031529,10.5939946094669,1.03193433981611,0.740778109478847,1.88368457004691,6.01454601972511,5.0331198105435,4.58941760983409,7.13752406850656,4.00779924032829,0,0,0.203319467126849,0.108005340821801,0,0.436725127492355,0.269728692769641,0.578574190077352,0.523511883968059,0.518459893167171,1.86401793926078,0.56369293868419,0,0,0.583353565032143,0.258319646955462,1.01373675294467,0.58678619322877,0.13020438484395,0.314578033277133,0.483168241652012,0.288030006257865,5.37218905067903,0.405450430580328,0.102710957164827,1.29920822977795,2.32734704367726,3.9736270956253,2.28371354087941,1.9199638532695,3.83672509802961,1.600342939755,1.51239277705261,3.70339946811059,2.02044867444692,2.80504565235765,2.72076460338254,0,0,0,4.056981474676,6.19352168988901,4.39563898241436,1.07184189539533,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0.412070114477788,0.962757628775446,0.252697211763798,0.50695859978048,0.188626341386076,0.0936415074698824,0.448176066834085,0.229741875822453,0.476293691283074,0,0.38581844092741,1.23625770240992,0.147198920134397,0,0.177475806159338,0.715308569841963,0.436039249896986,0.188218760830661,0.0846146078916765,0.365855945745545,0,0.135804113845862,0.561142271657738,0.355905054372522,0.197008964751127,0,0.464810523557898,0,0,0.935726433781634,0.859484216193193,0.956441660344217,1.10295709559758,2.08681052058379 | |phase1_expression=0,0,0.454999239389536,0,0,0,0,78.1196106821536,4.36445038670167,8.42632294759177,1.54096171402954,0.478632953972018,45.7105948916319,89.9555940891483,0.666219523631325,6.07425802169478,0.699561878128147,35.9626868508391,38.9404991440298,22.9170411970936,1.78590909317247,1.29078236561151,4.96279599363977,4.31979541542198,4.35877634027623,0,0,0.215471232685889,1.14014051673824,0.756090389279792,0.443461021310609,0,0,0,0,0,0,0,0.7813353445238,1.57057123192139,0,0,1.45653105909346,1.38486499773135,1.4192770370732,0.917733760808408,0.782391344348039,0,0.219686182734472,0,0.839918529752175,0,21.643956181448,15.2326049822382,23.8626597391149,0.514518872071894,0.85960031981627,0,0,0,0,0.338844532069132,0,1.7997994345628,1.97773272513395,0.7104801149461,0.299600110518405,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.153606533256243,0.263772575460388,0.0914876436024097,0,0,0,0.30559649555362,0,0.142371680799103,0,1.4387976733305,0.453429360640713,28.4067198927644,12.0459342777394,0,0,0,0.448026887097336,4.63466586434781,1.53387290320252,0.779358013808606,0.70667914902068,0,0,0,0,0,0,0,2.51204535381932,68.3596012828533,2.82040064223167,0.173485326766136,0.608930956624282,0,0.904335843315735,1.05829836422134,1.38233250462643,0.247194967734374,5.63937491987655,12.3845477272982,0.485300549842228,1.32504911076236,2.90925151881133,0,0.292780797011547,0,0.510914110417183,3.47463861067169,2.39961092397363,2.28726408731516,0,0,0.125654352112864,0,0,0.83115217823824,0,0.407357455401265,2.11491850037158,0.758168275301024,0.631325567659422,0,0,0,0,0.136072998302656,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,2.80885274925294,2.31613116403244,1.13665399758237,0,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0.465067889500816,0.536546802799238,0.350296027101508,0.16455984991348,0.985004784474571,2.43206428637567,3.07019973593198,3.29325172936576,2.81833479396781,0.420579897128254,0.205809224758569,0,2.11560453330835,0,0,0.257734922644187,0.403367049246685,0.22237804384487,0.760902504450237,0.474529061544512,0.164698954724011,0.251335208800269,0.596869416123452,0.19496408711912,1.79763881730844,0.864552199498777,0.398282546508734,0,0,0,0,0.581857461502877,0.140271639780637,1.07502113111237,2.65698266363284,1.72698600625512,1.1105744752962,3.26097889795864,0.166845105716094,0,0,0.811440485554012,0.241177159752417,0.25462585178142,2.87696137450811,0.972811360650212,0.274561413188081,5.75072826109418,2.60498663367952,3.12037673114561,2.02063102357689,2.51156378930677,2.8946611281802,8.49864674766381,0,0,0,0.234690248288502,0.502518772325447,1.42826184531608,0.195133647857799,1.7339865851681,1.55025282754142,0.956728611944923,4.26044618260919,4.31712454664739,1.73578870297814,94.9985088817415,78.3224184698942,2.95058563811422,3.86311444826625,0.321101179975584,0,0.819674726883377,2.01976741763498,0,0,0,0,0.222798674082394,0,0,0,0,0.642642632843614,3.12268187458191,0.35613120733451,0.325773918707152,3.79431282836832,3.98235415019888,0,0,0,0,1.84461088766356,1.29214146584111,2.54473610634254,0,0.948110273807448,2.10837217149998,2.06271086496374,0.680879211507576,0,0,0,0.354680467284547,0.356737635204141,0,0,0.938686832254841,0,0.220528398054962,2.63818004706368,0.807322133479528,0.361877549568935,0.596861720015682,0.164140899745061,0.291480836629851,0.556275906031529,10.5939946094669,1.03193433981611,0.740778109478847,1.88368457004691,6.01454601972511,5.0331198105435,4.58941760983409,7.13752406850656,4.00779924032829,0,0,0.203319467126849,0.108005340821801,0,0.436725127492355,0.269728692769641,0.578574190077352,0.523511883968059,0.518459893167171,1.86401793926078,0.56369293868419,0,0,0.583353565032143,0.258319646955462,1.01373675294467,0.58678619322877,0.13020438484395,0.314578033277133,0.483168241652012,0.288030006257865,5.37218905067903,0.405450430580328,0.102710957164827,1.29920822977795,2.32734704367726,3.9736270956253,2.28371354087941,1.9199638532695,3.83672509802961,1.600342939755,1.51239277705261,3.70339946811059,2.02044867444692,2.80504565235765,2.72076460338254,0,0,0,4.056981474676,6.19352168988901,4.39563898241436,1.07184189539533,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0.412070114477788,0.962757628775446,0.252697211763798,0.50695859978048,0.188626341386076,0.0936415074698824,0.448176066834085,0.229741875822453,0.476293691283074,0,0.38581844092741,1.23625770240992,0.147198920134397,0,0.177475806159338,0.715308569841963,0.436039249896986,0.188218760830661,0.0846146078916765,0.365855945745545,0,0.135804113845862,0.561142271657738,0.355905054372522,0.197008964751127,0,0.464810523557898,0,0,0.935726433781634,0.859484216193193,0.956441660344217,1.10295709559758,2.08681052058379 | ||
|short_description=p1@Gm16340,p1@Ifi203,p1@LOC100044071,p1@LOC100048583 | |short_description=p1@Gm16340,p1@Ifi203,p1@LOC100044071,p1@LOC100048583 | ||
}} | }} |
Latest revision as of 20:53, 26 September 2015
Short description: | p1@Gm16340, p1@Ifi203, p1@LOC100044071, p1@LOC100048583 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm16340_5end, CAGE_peak_1_at_Ifi203_5end, CAGE_peak_1_at_LOC100044071_5end, CAGE_peak_1_at_LOC100048583_5end |
Coexpression cluster: | MCL_coexpression_mm9:918 |
Association with transcript: | 0bp_to_ENSMUST00000042228, ENSMUST00000081216, ENSMUST00000128430, ENSMUST00000140143, NM_008328, uc007dsc.1, uc007dsd.1, uc007dse.1_5end |
EntrezGene: | 100044071,100048583,100504287,15950 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 5.80e-11 | 32 |
hematopoietic oligopotent progenitor cell | 5.80e-11 | 32 |
hematopoietic stem cell | 5.80e-11 | 32 |
hematopoietic multipotent progenitor cell | 5.80e-11 | 32 |
connective tissue cell | 3.84e-09 | 46 |
mesenchymal cell | 3.84e-09 | 46 |
lymphoid lineage restricted progenitor cell | 6.52e-09 | 12 |
hematopoietic lineage restricted progenitor cell | 9.04e-09 | 25 |
leukocyte | 3.59e-08 | 17 |
nongranular leukocyte | 3.59e-08 | 17 |
T cell | 5.33e-08 | 11 |
pro-T cell | 5.33e-08 | 11 |
lymphocyte | 6.12e-08 | 13 |
common lymphoid progenitor | 6.12e-08 | 13 |
mature alpha-beta T cell | 4.61e-07 | 9 |
alpha-beta T cell | 4.61e-07 | 9 |
immature T cell | 4.61e-07 | 9 |
mature T cell | 4.61e-07 | 9 |
immature alpha-beta T cell | 4.61e-07 | 9 |
motile cell | 4.90e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.11e-15 | 48 |
immune system | 3.11e-15 | 48 |
hematopoietic system | 5.31e-13 | 45 |
blood island | 5.31e-13 | 45 |
lateral plate mesoderm | 3.01e-09 | 87 |
connective tissue | 3.84e-09 | 46 |
mixed endoderm/mesoderm-derived structure | 5.49e-09 | 35 |
hemopoietic organ | 6.40e-09 | 29 |
immune organ | 6.40e-09 | 29 |
mesoderm | 3.90e-08 | 120 |
mesoderm-derived structure | 3.90e-08 | 120 |
presumptive mesoderm | 3.90e-08 | 120 |
pharynx | 2.75e-07 | 24 |
upper respiratory tract | 2.75e-07 | 24 |
chordate pharynx | 2.75e-07 | 24 |
pharyngeal arch system | 2.75e-07 | 24 |
pharyngeal region of foregut | 2.75e-07 | 24 |
gland of gut | 3.71e-07 | 24 |
foregut | 7.60e-07 | 80 |
thymus | 8.56e-07 | 23 |
neck | 8.56e-07 | 23 |
respiratory system epithelium | 8.56e-07 | 23 |
hemolymphoid system gland | 8.56e-07 | 23 |
pharyngeal epithelium | 8.56e-07 | 23 |
thymic region | 8.56e-07 | 23 |
pharyngeal gland | 8.56e-07 | 23 |
entire pharyngeal arch endoderm | 8.56e-07 | 23 |
thymus primordium | 8.56e-07 | 23 |
early pharyngeal endoderm | 8.56e-07 | 23 |