FFCP PHASE1:Hg19::chr2:207804239..207804264,+: Difference between revisions
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|id=chr2:207804239..207804264,+
|short_description=p1@CPO
|description=CAGE_peak_1_at_CPO_5end
|association_with_transcript=-13bp_to_ENST00000272852,NM_173077,uc002...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=130749 | |EntrezGene=130749 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21011 | |HGNC=21011 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IVL8 | |UniProt=Q8IVL8 | ||
|association_with_transcript=-13bp_to_ENST00000272852,NM_173077,uc002vby.2_5end | |||
|cluster_id=chr2:207804239..207804264,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_CPO_5end | |||
|id=chr2:207804239..207804264,+ | |||
|ontology_enrichment_celltype=CL:0000767!2.32e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;5.04e-34;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!2.64e-25!3;UBERON:0004054!2.64e-25!3;UBERON:0001301!1.08e-19!1;UBERON:0001000!1.56e-19!1;UBERON:0005352!1.56e-19!1;UBERON:0005904!2.98e-19!4;UBERON:0001882!3.25e-19!1;UBERON:0005403!3.25e-19!1;UBERON:0000369!8.11e-19!4;UBERON:0002435!8.11e-19!4;UBERON:0000204!8.11e-19!4;UBERON:0010082!8.11e-19!4;UBERON:0003135!1.60e-15!11;UBERON:0009663!3.48e-11!7;UBERON:0001873!2.99e-10!2;UBERON:0010122!2.99e-10!2;UBERON:0001155!4.80e-09!9;UBERON:0002308!6.61e-09!9;UBERON:0002420!6.61e-09!9;UBERON:0000125!6.61e-09!9;UBERON:0007245!6.61e-09!9;UBERON:0010009!6.61e-09!9;UBERON:0010011!6.61e-09!9;UBERON:0000454!6.61e-09!9;UBERON:0003101!4.55e-08!22;UBERON:0000079!4.55e-08!22;UBERON:0000059!1.46e-07!11;UBERON:0007023!2.23e-07!115;UBERON:0005383!2.97e-07!3;UBERON:0005382!2.97e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;2.39e-66;1!UBERON:0006947;3.27e-23;3!UBERON:0004054;3.27e-23;3!UBERON:0005904;8.69e-18;4!UBERON:0000160;9.05e-16;17!UBERON:0002108;1.40e-14;4!UBERON:0005409;1.33e-12;22!UBERON:0004921;2.80e-09;33!UBERON:0001155;1.21e-08;9!UBERON:0000058;6.13e-08;10!UBERON:0003135;2.47e-07;11!UBERON:0000059;2.63e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,2.39e-66,1;UBERON:0006947,3.27e-23,3;UBERON:0004054,3.27e-23,3;UBERON:0005904,8.69e-18,4;UBERON:0000160,9.05e-16,17;UBERON:0002108,1.40e-14,4;UBERON:0005409,2.77e-11,25;UBERON:0005103,1.35e-09,8;UBERON:0000083,1.35e-09,8;UBERON:0009201,1.35e-09,8;UBERON:0006553,1.35e-09,8;UBERON:0003074,1.35e-09,8;UBERON:0003060,1.35e-09,8;UBERON:0000080,1.12e-08,9;UBERON:0002120,1.12e-08,9;UBERON:0004875,1.12e-08,9;UBERON:0005721,1.12e-08,9;UBERON:0005754,1.12e-08,9;UBERON:0007297,1.12e-08,9;UBERON:0001155,1.21e-08,9;UBERON:0003135,2.47e-07,11;UBERON:0004876,2.47e-07,11;UBERON:0000059,2.63e-07,11;UBERON:0003887,7.92e-07,12 | |||
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|short_description=p1@CPO | |||
}} | }} |
Latest revision as of 18:06, 19 September 2015
Short description: | p1@CPO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CPO_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -13bp_to_ENST00000272852, NM_173077, uc002vby.2_5end |
EntrezGene: | CPO |
HGNC: | 21011 |
UniProt: | Q8IVL8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 2.39e-66 | 1 |
male genital duct | 3.27e-23 | 3 |
internal male genitalia | 3.27e-23 | 3 |
duct of male reproductive system | 8.69e-18 | 4 |
intestine | 9.05e-16 | 17 |
small intestine | 1.40e-14 | 4 |
gastrointestinal system | 2.77e-11 | 25 |
mesonephric epithelium | 1.35e-09 | 8 |
mesonephric tubule | 1.35e-09 | 8 |
nephric duct | 1.35e-09 | 8 |
renal duct | 1.35e-09 | 8 |
mesonephric duct | 1.35e-09 | 8 |
pronephric duct | 1.35e-09 | 8 |
mesonephros | 1.12e-08 | 9 |
pronephros | 1.12e-08 | 9 |
nephrogenic cord | 1.12e-08 | 9 |
pronephric mesoderm | 1.12e-08 | 9 |
rostral part of nephrogenic cord | 1.12e-08 | 9 |
presumptive pronephric mesoderm | 1.12e-08 | 9 |
colon | 1.21e-08 | 9 |
male reproductive organ | 2.47e-07 | 11 |
urogenital ridge | 2.47e-07 | 11 |
large intestine | 2.63e-07 | 11 |
intraembryonic coelom | 7.92e-07 | 12 |