FFCP PHASE1:Mm9::chr10:76993087..76993157,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16414 | |EntrezGene=16414 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |MCL_coexpression_id=3 | ||
|TSSclassifier=NA | |||
|UniProt=D3YYP8,D3Z1S4,P11835,Q542I8 | |UniProt=D3YYP8,D3Z1S4,P11835,Q542I8 | ||
|association_with_transcript=0bp_to_ENSMUST00000130059,ENSMUST00000131023,ENSMUST00000153541,ENSMUST00000156644,NM_008404,uc007fvv.1,uc011xhe.1,uc011xhf.1_5end | |association_with_transcript=0bp_to_ENSMUST00000130059,ENSMUST00000131023,ENSMUST00000153541,ENSMUST00000156644,NM_008404,uc007fvv.1,uc011xhe.1,uc011xhf.1_5end | ||
|cluster_id=chr10:76993087..76993157,+ | |||
|description=CAGE_peak_1_at_Itgb2_5end | |description=CAGE_peak_1_at_Itgb2_5end | ||
|id=chr10:76993087..76993157,+ | |id=chr10:76993087..76993157,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.00e-10!32;CL:0002032!1.00e-10!32;CL:0000037!1.00e-10!32;CL:0000566!1.00e-10!32;CL:0000837!1.00e-10!32;CL:0002031!1.41e-10!25;CL:0000738!4.83e-09!17;CL:0002087!4.83e-09!17;CL:0000838!4.15e-08!12;CL:0000084!1.12e-07!11;CL:0000827!1.12e-07!11;CL:0000542!5.35e-07!13;CL:0000051!5.35e-07!13;CL:0000791!7.15e-07!9;CL:0000789!7.15e-07!9;CL:0002420!7.15e-07!9;CL:0002419!7.15e-07!9;CL:0000790!7.15e-07!9 | |ontology_enrichment_celltype=CL:0000988!1.00e-10!32;CL:0002032!1.00e-10!32;CL:0000037!1.00e-10!32;CL:0000566!1.00e-10!32;CL:0000837!1.00e-10!32;CL:0002031!1.41e-10!25;CL:0000738!4.83e-09!17;CL:0002087!4.83e-09!17;CL:0000838!4.15e-08!12;CL:0000084!1.12e-07!11;CL:0000827!1.12e-07!11;CL:0000542!5.35e-07!13;CL:0000051!5.35e-07!13;CL:0000791!7.15e-07!9;CL:0000789!7.15e-07!9;CL:0002420!7.15e-07!9;CL:0002419!7.15e-07!9;CL:0000790!7.15e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.38e-11,32;CL:0002032,7.38e-11,32;CL:0000037,7.38e-11,32;CL:0000837,7.38e-11,32;CL:0002031,1.02e-10,25;CL:0000738,4.38e-09,17;CL:0002087,4.38e-09,17;CL:0000838,3.81e-08,12;CL:0000084,1.04e-07,11;CL:0000827,1.04e-07,11;CL:0000542,4.98e-07,13;CL:0000051,4.98e-07,13;CL:0000791,6.67e-07,9;CL:0000789,6.67e-07,9;CL:0002420,6.67e-07,9;CL:0002419,6.67e-07,9;CL:0000790,6.67e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!4.04e-20!70;UBERON:0002193!7.86e-19!48;UBERON:0002390!1.87e-17!45;UBERON:0003061!1.87e-17!45;UBERON:0000926!1.26e-11!193;UBERON:0004120!1.26e-11!193;UBERON:0006603!1.26e-11!193;UBERON:0000077!1.95e-11!97;UBERON:0005057!3.36e-11!51;UBERON:0001041!5.15e-11!92;UBERON:0003104!2.98e-10!131;UBERON:0009142!2.98e-10!131;UBERON:0004177!6.83e-10!29;UBERON:0003081!1.31e-09!88;UBERON:0002371!1.46e-08!16;UBERON:0004119!4.04e-08!130;UBERON:0000925!4.04e-08!130;UBERON:0006595!4.04e-08!130;UBERON:0001007!4.47e-08!128;UBERON:0001555!4.47e-08!128;UBERON:0007026!4.47e-08!128;UBERON:0001474!7.07e-08!22;UBERON:0004765!7.07e-08!22;UBERON:0001434!7.07e-08!22;UBERON:0001004!8.87e-08!42;UBERON:0000065!1.53e-07!41;UBERON:0004921!1.54e-07!126;UBERON:0004185!1.54e-07!126;UBERON:0003408!2.05e-07!24;UBERON:0002204!2.86e-07!32;UBERON:0006562!3.43e-07!24;UBERON:0001557!3.43e-07!24;UBERON:0001042!3.43e-07!24;UBERON:0008814!3.43e-07!24;UBERON:0009145!3.43e-07!24;UBERON:0002370!3.49e-07!23;UBERON:0000974!3.49e-07!23;UBERON:0004807!3.49e-07!23;UBERON:0005058!3.49e-07!23;UBERON:0003351!3.49e-07!23;UBERON:0009113!3.49e-07!23;UBERON:0003295!3.49e-07!23;UBERON:0009722!3.49e-07!23;UBERON:0005562!3.49e-07!23;UBERON:0007690!3.49e-07!23 | |ontology_enrichment_uberon=UBERON:0002405!4.04e-20!70;UBERON:0002193!7.86e-19!48;UBERON:0002390!1.87e-17!45;UBERON:0003061!1.87e-17!45;UBERON:0000926!1.26e-11!193;UBERON:0004120!1.26e-11!193;UBERON:0006603!1.26e-11!193;UBERON:0000077!1.95e-11!97;UBERON:0005057!3.36e-11!51;UBERON:0001041!5.15e-11!92;UBERON:0003104!2.98e-10!131;UBERON:0009142!2.98e-10!131;UBERON:0004177!6.83e-10!29;UBERON:0003081!1.31e-09!88;UBERON:0002371!1.46e-08!16;UBERON:0004119!4.04e-08!130;UBERON:0000925!4.04e-08!130;UBERON:0006595!4.04e-08!130;UBERON:0001007!4.47e-08!128;UBERON:0001555!4.47e-08!128;UBERON:0007026!4.47e-08!128;UBERON:0001474!7.07e-08!22;UBERON:0004765!7.07e-08!22;UBERON:0001434!7.07e-08!22;UBERON:0001004!8.87e-08!42;UBERON:0000065!1.53e-07!41;UBERON:0004921!1.54e-07!126;UBERON:0004185!1.54e-07!126;UBERON:0003408!2.05e-07!24;UBERON:0002204!2.86e-07!32;UBERON:0006562!3.43e-07!24;UBERON:0001557!3.43e-07!24;UBERON:0001042!3.43e-07!24;UBERON:0008814!3.43e-07!24;UBERON:0009145!3.43e-07!24;UBERON:0002370!3.49e-07!23;UBERON:0000974!3.49e-07!23;UBERON:0004807!3.49e-07!23;UBERON:0005058!3.49e-07!23;UBERON:0003351!3.49e-07!23;UBERON:0009113!3.49e-07!23;UBERON:0003295!3.49e-07!23;UBERON:0009722!3.49e-07!23;UBERON:0005562!3.49e-07!23;UBERON:0007690!3.49e-07!23 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.29e-19,48;UBERON:0002405,3.29e-19,48;UBERON:0002390,8.05e-18,45;UBERON:0003061,8.05e-18,45;UBERON:0001041,7.33e-11,80;UBERON:0004177,3.47e-10,29;UBERON:0005057,3.47e-10,29;UBERON:0000077,9.33e-10,35;UBERON:0003081,2.35e-09,87;UBERON:0002371,1.33e-08,16;UBERON:0001004,5.39e-08,42;UBERON:0001474,5.95e-08,22;UBERON:0004765,5.95e-08,22;UBERON:0001434,5.95e-08,22;UBERON:0004119,6.00e-08,118;UBERON:0000925,6.00e-08,118;UBERON:0006595,6.00e-08,118;UBERON:0001007,6.51e-08,116;UBERON:0001555,6.51e-08,116;UBERON:0007026,6.51e-08,116;UBERON:0000065,9.34e-08,41;UBERON:0003408,1.12e-07,24;UBERON:0000926,1.37e-07,120;UBERON:0004120,1.37e-07,120;UBERON:0006603,1.37e-07,120;UBERON:0002204,1.57e-07,32;UBERON:0006562,1.91e-07,24;UBERON:0001557,1.91e-07,24;UBERON:0001042,1.91e-07,24;UBERON:0008814,1.91e-07,24;UBERON:0009145,1.91e-07,24;UBERON:0002370,1.92e-07,23;UBERON:0000974,1.92e-07,23;UBERON:0004807,1.92e-07,23;UBERON:0005058,1.92e-07,23;UBERON:0003351,1.92e-07,23;UBERON:0009113,1.92e-07,23;UBERON:0003295,1.92e-07,23;UBERON:0009722,1.92e-07,23;UBERON:0005562,1.92e-07,23;UBERON:0007690,1.92e-07,23;UBERON:0004921,2.24e-07,114 | |||
|phase1_expression=0.320297694209588,0.348975407639361,0,0,0,0,0,381.430297446416,168.10173424909,177.186846425749,208.543485298665,177.413281605628,367.910368622161,353.353266577587,58.294208317741,65.3995113669138,44.7719602002014,137.068310848154,134.372144933624,123.497388673227,17.5189177711204,79.4327609607082,67.6507453869843,38.7181663160044,34.6408014411427,0.57423196411502,0,0.430942465371778,4.56056206695297,8.82105454159758,7.31710685162506,2.54012269383853,6.1506478758457,0,0,0,0,3070.76657471669,1625.95885195403,2478.36140397196,3203.5086838169,3055.94549970409,2938.30865654454,0,0,0,1.56478268869608,0,0,0.388859798148567,1.39986421625363,0,79.8645204834825,274.186889680288,221.821907434026,11.8339340576536,12.0344044774278,12.8918023069361,0,0,0,0.677689064138264,0.889294796111139,428.352265425946,568.59815847601,473.179756554103,95.5724352553711,33.0427742576537,0.103689612308478,0.270011876663381,0,1.14260393761521,2.65042249141936,0.734944795289724,0.479227355091182,0,3.30347642998166,2.80912143787413,2.4577045320999,0.659431438650969,0.365950574409639,0,3.07101298901519,3.93933827022176,4.43114918552749,2.06240009831567,1.42371680799103,0.745597783301202,5.45228591998925,1.20914496170857,3.47837386442013,18.9293252935905,0.679971333707751,0.539703191637817,4.54843492213368,1.79210754838934,32.3022166303029,0,0,0,0,0,0,0,4.11332977921307,3.54703811665138,4.04419556011827,18.4977885144877,168.309624370662,47.2046002226143,2.60227990149204,5.48037860961854,3.68984795609694,2.86373017049983,5.99702406392095,9.55066094105534,1.97755974187499,37.0174353714974,196.383542532872,22.4855921426899,59.8480515027667,75.1556642359594,14.9113408974498,1.17112318804619,1.46612694769419,28.3557331281536,17.2533779288525,8.39863823390771,18.4251829255944,4.94309110035915,7.32000964509802,0.879580464790051,4.69325664519146,3.06858548796397,3.74018480207208,5.19172041816825,2.95334155165917,104.004227430038,5.05445516867349,12.6265113531884,1.69156575851515,0.229902104433473,1.44049703844279,2.26057226753573,1.7009124787832,1.2811372028485,1.87403449119458,2.58703370739016,1.07783996466421,0.567318240503458,0.175951124163949,1.97276159184817,1.39023624612799,1.0447564995665,4.52720700097476,0.995171334092466,20.3641824320838,14.9261786126535,25.5747149456033,1.65700618028402,1.64168241986767,2.34080679899319,2.3674473558521,2.95146347621106,2.00547246753592,1.86027155800326,1.07309360559848,2.56883753207773,0.987359099480883,6.7308660272429,5.99909190639332,9.64919917007193,25.6873634890529,15.4337381574428,5.46753866266731,0.92614151141356,19.4947081960441,6.34681359992506,1.2797295032114,1.85789337488351,3.09281907173024,2.42020229548011,2.44615848229357,3.42406127002606,14.2358718463353,4.28217282282428,11.5614196048124,8.75408476981064,9.94316844307513,11.6846523125049,11.6714546932335,9.95706366271836,0.569003702859245,1.71372768914593,3.38123207019241,1.01825663922657,1.74557238450863,1.26244475802573,2.90888070771584,4.42830443938806,5.33795674660674,3.57851775373222,16.6013471168803,8.00856507437251,12.7763346823582,11.6928298440124,17.0402501966342,27.0118418922707,38.4485036189944,46.8944704044821,40.6959419205339,30.7508782770651,38.8174157623857,39.8190814005299,29.0195035996541,11.1134706296729,12.3784215330119,14.9557491622644,109.558641768797,1.51593129416388,1.46668478797823,2.37643120085263,2.58159273117352,6.53274404023081,15.9489239393629,20.2938993772111,38.1477048736982,33.8840975162626,24.556034373253,68.82259218061,97.567014754231,79.1230350440868,755.464332535754,660.301500155913,17.7035138286853,18.4877620024171,5.45872005958493,3.6335622843583,0,13.1284882146274,0.315508219416257,0.390438744296638,0,0,0,0,0,0,1.18586333383957,2.57057053137446,13.7681882652021,4.62970569534864,2.44330439030364,27.5500105364134,15.9294166007955,1.45668381692989,1.81394134178851,3.96070667487386,6.79194353625777,7.07100840271033,5.16856586336442,7.63420831902762,10.6949213515416,18.0140952023415,10.5418608574999,14.4389760547462,3.74483566329167,1.26042765821917,1.29358683782755,1.28602221018955,1.77340233642274,2.31879462882692,0.987294123612726,2.43571959291679,18.5390649370331,2.54198485036584,5.51320995137405,10.2229476823718,4.84393280087717,3.86002719540197,3.22305328808468,4.43180429311665,12.8251568117134,7.04616147639937,148.657666294132,61.5032866530403,99.6346557249049,86.8378586791626,74.9084367911218,116.905646508533,22.9470880491705,32.0488825821177,39.6633924818696,3.81868247206045,0.790839983952838,4.67634774391752,3.13215488383224,2.50905955217362,2.83871332870031,4.5853877770839,9.58780086413897,10.4702376793612,7.64728342421578,19.8828580187816,0.56369293868419,0.299033092087958,0.827292452285488,2.72231663681667,2.71235629303235,4.56181538825101,2.58185925020659,3.3853140059427,1.57289016638566,1.93267296660805,2.30424005006292,146.945171092103,12.5689633479902,19.001527075493,26.7636895334258,40.6390599165183,75.8962775264432,95.1947960198153,112.834798761377,105.812839545659,88.85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| ||
|short_description=p1@Itgb2 | |short_description=p1@Itgb2 | ||
}} | }} |
Latest revision as of 08:02, 26 September 2015
Short description: | p1@Itgb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Itgb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 0bp_to_ENSMUST00000130059, ENSMUST00000131023, ENSMUST00000153541, ENSMUST00000156644, NM_008404, uc007fvv.1, uc011xhe.1, uc011xhf.1_5end |
EntrezGene: | Itgb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 7.38e-11 | 32 |
hematopoietic oligopotent progenitor cell | 7.38e-11 | 32 |
hematopoietic stem cell | 7.38e-11 | 32 |
hematopoietic multipotent progenitor cell | 7.38e-11 | 32 |
hematopoietic lineage restricted progenitor cell | 1.02e-10 | 25 |
leukocyte | 4.38e-09 | 17 |
nongranular leukocyte | 4.38e-09 | 17 |
lymphoid lineage restricted progenitor cell | 3.81e-08 | 12 |
T cell | 1.04e-07 | 11 |
pro-T cell | 1.04e-07 | 11 |
lymphocyte | 4.98e-07 | 13 |
common lymphoid progenitor | 4.98e-07 | 13 |
mature alpha-beta T cell | 6.67e-07 | 9 |
alpha-beta T cell | 6.67e-07 | 9 |
immature T cell | 6.67e-07 | 9 |
mature T cell | 6.67e-07 | 9 |
immature alpha-beta T cell | 6.67e-07 | 9 |