FFCP PHASE1:Mm9::chr17:88002968..88003014,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |MCL_coexpression_id=12 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:88002968..88003014,+ | |||
|description=CAGE_peak_at_chr17:88002968..88003014,+ | |description=CAGE_peak_at_chr17:88002968..88003014,+ | ||
|id=chr17:88002968..88003014,+ | |id=chr17:88002968..88003014,+ | ||
|ontology_enrichment_celltype=CL:0002563!8.60e-16!9;CL:0002251!8.60e-16!9;CL:0000075!4.05e-12!7;CL:0000239!2.60e-11!6;CL:0000677!2.60e-11!6;CL:0000212!2.60e-11!6;CL:0000584!2.60e-11!6;CL:0000066!2.45e-09!25;CL:0002076!1.53e-08!15 | |ontology_enrichment_celltype=CL:0002563!8.60e-16!9;CL:0002251!8.60e-16!9;CL:0000075!4.05e-12!7;CL:0000239!2.60e-11!6;CL:0000677!2.60e-11!6;CL:0000212!2.60e-11!6;CL:0000584!2.60e-11!6;CL:0000066!2.45e-09!25;CL:0002076!1.53e-08!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.34e-31,9;CL:0002251,1.34e-31,9;CL:0000239,4.08e-22,6;CL:0000677,4.08e-22,6;CL:0000584,4.08e-22,6;CL:0000075,7.11e-19,7;CL:0000066,7.18e-19,25;CL:0002076,2.28e-18,15;CL:0000223,2.13e-13,20;CL:0000682,1.35e-11,3;CL:0002250,4.85e-11,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.96e-26!43;UBERON:0000344!7.00e-25!15;UBERON:0001242!1.21e-21!13;UBERON:0000060!1.21e-21!13;UBERON:0001262!1.21e-21!13;UBERON:0004786!1.21e-21!13;UBERON:0005409!3.85e-21!59;UBERON:0003350!8.60e-16!9;UBERON:0004808!8.60e-16!9;UBERON:0001277!8.60e-16!9;UBERON:0000485!7.37e-15!11;UBERON:0004923!8.11e-14!24;UBERON:0001007!5.69e-07!128;UBERON:0001555!5.69e-07!128;UBERON:0007026!5.69e-07!128;UBERON:0004119!9.92e-07!130;UBERON:0000925!9.92e-07!130;UBERON:0006595!9.92e-07!130 | |ontology_enrichment_uberon=UBERON:0000160!1.96e-26!43;UBERON:0000344!7.00e-25!15;UBERON:0001242!1.21e-21!13;UBERON:0000060!1.21e-21!13;UBERON:0001262!1.21e-21!13;UBERON:0004786!1.21e-21!13;UBERON:0005409!3.85e-21!59;UBERON:0003350!8.60e-16!9;UBERON:0004808!8.60e-16!9;UBERON:0001277!8.60e-16!9;UBERON:0000485!7.37e-15!11;UBERON:0004923!8.11e-14!24;UBERON:0001007!5.69e-07!128;UBERON:0001555!5.69e-07!128;UBERON:0007026!5.69e-07!128;UBERON:0004119!9.92e-07!130;UBERON:0000925!9.92e-07!130;UBERON:0006595!9.92e-07!130 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.63e-51,15;UBERON:0001242,5.10e-44,13;UBERON:0001262,5.10e-44,13;UBERON:0004786,5.10e-44,13;UBERON:0000160,5.46e-41,31;UBERON:0003350,1.34e-31,9;UBERON:0004808,1.34e-31,9;UBERON:0001277,1.34e-31,9;UBERON:0004923,9.79e-31,24;UBERON:0005409,1.56e-28,47;UBERON:0000485,1.37e-25,11;UBERON:0002108,8.07e-14,4;UBERON:0001007,9.35e-12,116;UBERON:0001555,9.35e-12,116;UBERON:0007026,9.35e-12,116;UBERON:0004119,1.74e-11,118;UBERON:0000925,1.74e-11,118;UBERON:0006595,1.74e-11,118;UBERON:0000331,6.14e-11,3;UBERON:0002116,6.14e-11,3;UBERON:0001204,6.14e-11,3;UBERON:0001168,6.14e-11,3;UBERON:0004921,1.86e-09,114;UBERON:0001962,2.89e-08,2;UBERON:0001961,2.89e-08,2;UBERON:0001744,2.89e-08,2;UBERON:0001155,1.21e-07,2;UBERON:0000059,1.21e-07,2 | |||
|phase1_expression=0,13.9590163055744,17.2899710968024,7.56160528267075,7.01254021924886,6.37941233265181,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11975752938901,5.27641346454491,9.76194338995534,3.4460959692726,6.67960821326256,3.23039813075836,3.52842181663903,4.43461021310609,0,0,0,4.62162591602039,3.15845826181135,5.10423390655923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454357159999104,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,1.86391761218122,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,0.528901133327089,0,0,0.515469845288373,0.403367049246685,0.889512175379481,0.570676878337677,2.37264530772256,0.988193728344065,0.754005626400808,0.397912944082302,0.38992817423824,1.79763881730844,2.80979464837102,3.18626037206988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0.164140899745061,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,1.8146096260851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0,0.229741875822453,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0,0,0.263069711437843,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,13.9590163055744,17.2899710968024,7.56160528267075,7.01254021924886,6.37941233265181,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11975752938901,5.27641346454491,9.76194338995534,3.4460959692726,6.67960821326256,3.23039813075836,3.52842181663903,4.43461021310609,0,0,0,4.62162591602039,3.15845826181135,5.10423390655923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454357159999104,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,1.86391761218122,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,0.528901133327089,0,0,0.515469845288373,0.403367049246685,0.889512175379481,0.570676878337677,2.37264530772256,0.988193728344065,0.754005626400808,0.397912944082302,0.38992817423824,1.79763881730844,2.80979464837102,3.18626037206988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0.164140899745061,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,1.8146096260851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0,0.229741875822453,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0,0,0.263069711437843,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr17:88002968..88003014,+ | |short_description=p@chr17:88002968..88003014,+ | ||
}} | }} |
Latest revision as of 11:29, 5 August 2015
Short description: | p@chr17:88002968..88003014, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:88002968..88003014, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.34e-31 | 9 |
epithelial cell of alimentary canal | 1.34e-31 | 9 |
brush border epithelial cell | 4.08e-22 | 6 |
gut absorptive cell | 4.08e-22 | 6 |
enterocyte | 4.08e-22 | 6 |
columnar/cuboidal epithelial cell | 7.11e-19 | 7 |
epithelial cell | 7.18e-19 | 25 |
endo-epithelial cell | 2.28e-18 | 15 |
endodermal cell | 2.13e-13 | 20 |
M cell of gut | 1.35e-11 | 3 |
intestinal crypt stem cell | 4.85e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 6.63e-51 | 15 |
intestinal mucosa | 5.10e-44 | 13 |
wall of intestine | 5.10e-44 | 13 |
gastrointestinal system mucosa | 5.10e-44 | 13 |
intestine | 5.46e-41 | 31 |
epithelium of mucosa | 1.34e-31 | 9 |
gastrointestinal system epithelium | 1.34e-31 | 9 |
intestinal epithelium | 1.34e-31 | 9 |
organ component layer | 9.79e-31 | 24 |
gastrointestinal system | 1.56e-28 | 47 |
simple columnar epithelium | 1.37e-25 | 11 |
small intestine | 8.07e-14 | 4 |
digestive system | 9.35e-12 | 116 |
digestive tract | 9.35e-12 | 116 |
primitive gut | 9.35e-12 | 116 |
endoderm-derived structure | 1.74e-11 | 118 |
endoderm | 1.74e-11 | 118 |
presumptive endoderm | 1.74e-11 | 118 |
ileal mucosa | 6.14e-11 | 3 |
ileum | 6.14e-11 | 3 |
mucosa of small intestine | 6.14e-11 | 3 |
wall of small intestine | 6.14e-11 | 3 |
subdivision of digestive tract | 1.86e-09 | 114 |
gut-associated lymphoid tissue | 2.89e-08 | 2 |
mucosa-associated lymphoid tissue | 2.89e-08 | 2 |
lymphoid tissue | 2.89e-08 | 2 |
colon | 1.21e-07 | 2 |
large intestine | 1.21e-07 | 2 |