FFCP PHASE1:Hg19::chr2:166651327..166651346,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:166651327..166651346,-
|short_description=p10@GALNT3
|description=CAGE_peak_10_at_GALNT3_5end
|association_with_transcript=-135bp_to_ENST00000392701_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2591 | |EntrezGene=2591 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4125 | |HGNC=4125 | ||
|TSSclassifier=strong | |||
|UniProt=Q14435 | |UniProt=Q14435 | ||
|association_with_transcript=-135bp_to_ENST00000392701_5end | |||
|cluster_id=chr2:166651327..166651346,- | |||
|description=CAGE_peak_10_at_GALNT3_5end | |||
|id=chr2:166651327..166651346,- | |||
|ontology_enrichment_celltype=CL:0002322!6.45e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;3.75e-12;5!CL:0000054;2.57e-08;2!CL:0000137;2.57e-08;2!CL:0000092;2.57e-08;2!CL:0000163;3.78e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.20e-12,5;CL:0002028,4.20e-12,5;CL:0000054,2.87e-08,2;CL:0000137,2.87e-08,2;CL:0000092,2.87e-08,2;CL:0000163,4.03e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0004872;3.30e-09;7!UBERON:0010122;1.86e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:201;2.77e-10;6!DOID:0060100;2.77e-10;6!DOID:4231;2.57e-08;2!DOID:200;2.57e-08;2!DOID:4305;2.57e-08;2!DOID:1907;2.57e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:201,2.77e-10,6;DOID:0060100,2.77e-10,6;DOID:4231,2.31e-08,2;DOID:1907,2.31e-08,2;DOID:200,2.87e-08,2;DOID:4305,2.87e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000153!1.94e-09!129;UBERON:0007811!1.94e-09!129;UBERON:0000924!2.04e-09!173;UBERON:0006601!2.04e-09!173;UBERON:0004121!2.69e-09!169;UBERON:0000033!3.44e-09!123;UBERON:0001049!3.81e-09!57;UBERON:0005068!3.81e-09!57;UBERON:0006241!3.81e-09!57;UBERON:0007135!3.81e-09!57;UBERON:0002298!5.97e-08!8;UBERON:0001017!6.37e-08!82;UBERON:0005743!8.10e-08!86;UBERON:0007023!1.25e-07!115;UBERON:0002616!1.49e-07!59;UBERON:0000165!4.86e-07!28;UBERON:0000930!4.86e-07!28;UBERON:0000073!6.11e-07!94;UBERON:0001016!6.11e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;3.32e-20;3!UBERON:0004177;1.59e-12;5!UBERON:0005057;1.59e-12;5!UBERON:0002298;2.24e-10;6!UBERON:0001897;1.25e-08;2!UBERON:0010225;1.25e-08;2!UBERON:0001873;1.86e-08;2!UBERON:0002148;2.57e-08;2!UBERON:0006331;2.57e-08;2!UBERON:0009662;2.57e-08;2!UBERON:0000125;3.29e-07;9!UBERON:0002308;3.29e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.01e-20,3;UBERON:0004854,3.01e-20,3;UBERON:0009034,3.01e-20,3;UBERON:0002095,3.01e-20,3;UBERON:0004782,3.01e-20,3;UBERON:0003281,3.01e-20,3;UBERON:0009664,3.01e-20,3;UBERON:0002296,3.01e-20,3;UBERON:0005602,3.01e-20,3;UBERON:0001179,3.01e-20,3;UBERON:0006293,3.01e-20,3;UBERON:0002298,2.09e-10,6;UBERON:0004177,3.17e-09,7;UBERON:0005057,3.17e-09,7;UBERON:0003076,4.01e-09,15;UBERON:0003057,4.01e-09,15;UBERON:0001897,1.20e-08,2;UBERON:0010225,1.20e-08,2;UBERON:0001873,1.73e-08,2;UBERON:0010122,1.73e-08,2;UBERON:0002148,2.15e-08,2;UBERON:0006331,2.15e-08,2;UBERON:0009662,2.15e-08,2;UBERON:0000945,3.51e-08,8;UBERON:0010039,3.51e-08,8;UBERON:0000125,2.95e-07,9;UBERON:0002308,2.95e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0.401088894940283,0,0,0,0,0,0,0,0,0,0,0.575384784644301,0.256160706529101,0.47296445977717,0,0,0,0,0,0,0,0,0.639337125799041,0,0.199463657621632,0,0,0,0,0.75374599577023,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491337269247072,0,0,0.247266929278557,0,0,0.336672227908132,0.125118519871964,0,0,0.919463387397059,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0.80823028409406,0,0,0,0.193260853163297,0,0.573609190778008,0.853815942907168,0.265059536642971,0.69716365721711,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.179117045405697,0.290633938513962,0.766765358330422,1.47798971368783,0.264145302039678,1.03664057770386,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0.664225598535437,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.27470839445503,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.405820753925408,0,0,0,0,0.35667105148125,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0.399158742865633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.222886768554957,0,0.23874448473769,0,0,0.994147647766298,0.140669416410513,0.222617410045812,0.16480387422676,0,0,0,0,0,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0,0,0,0,0,0,2.65722415744152,0.120596438625408,0,0.110579259931225,0,0,0,0.139423744278603,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0.539209063845416,0,0.468528891450678,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0.195984794828755,0.34823682632161,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0.240476460754601,0,0,0,0.114536596165916,0,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0.687697182986169,1.24632101408756,0,0,0.0607495566580247,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,1.80996138906171,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,0,0,2.29363678276028,0.110929051536852,0.496771223531068,0,0,0,0.285465333544967,0,0,0,0,0,0,0.568209015825267,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,1.70254786070051,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0.138314504928436,0,0,0.294443155503077,0,0.183428598521679,0.231051332300676,1.1441462864015,0,3.38157577597667,0.300841313397029,0.40341013740704,0,0,0.327543835020193,0,0.202612753855184,0,0,0.0634158101939068,0,0.548257766857182,0,4.04503862027127,0.638812138197976,0,0,0,0.227662191351298,0.0887023701626388,0,0,0.203909198930495,0,0,0.222462803784138,0.235479278551542,0,0,0,0.215927591218621,0,0.214429632529969,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0.9164274741762,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0.981542335574726,0,2.5359343655004,0,3.853340637174,3.41626806259959,0,0.71421575442263,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,4.97501663675268,0.724030971033267,0.213233981900981,0,0,0.248298857183432,0.33639558774184,0.190941474834495,0,0.217716747896961,0,0.134704106029175,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0.401088894940283,0,0,0,0,0,0,0,0,0,0,0.575384784644301,0.256160706529101,0.47296445977717,0,0,0,0,0,0,0,0,0.639337125799041,0,0.199463657621632,0,0,0,0,0.75374599577023,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491337269247072,0,0,0.247266929278557,0,0,0.336672227908132,0.125118519871964,0,0,0.919463387397059,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0.80823028409406,0,0,0,0.193260853163297,0,0.573609190778008,0.853815942907168,0.265059536642971,0.69716365721711,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.179117045405697,0.290633938513962,0.766765358330422,1.47798971368783,0.264145302039678,1.03664057770386,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0.664225598535437,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.27470839445503,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.405820753925408,0,0,0,0,0.35667105148125,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0.399158742865633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.222886768554957,0,0.23874448473769,0,0,0.994147647766298,0.140669416410513,0.222617410045812,0.16480387422676,0,0,0,0,0,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0,0,0,0,0,0,2.65722415744152,0.120596438625408,0,0.110579259931225,0,0,0,0.139423744278603,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0.539209063845416,0,0.468528891450678,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0.195984794828755,0.34823682632161,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0.240476460754601,0,0,0,0.114536596165916,0,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0.687697182986169,1.24632101408756,0,0,0.0607495566580247,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,1.80996138906171,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,0,0,2.29363678276028,0.110929051536852,0.496771223531068,0,0,0,0.285465333544967,0,0,0,0,0,0,0.568209015825267,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,1.70254786070051,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0.138314504928436,0,0,0.294443155503077,0,0.183428598521679,0.231051332300676,1.1441462864015,0,3.38157577597667,0.300841313397029,0.40341013740704,0,0,0.327543835020193,0,0.202612753855184,0,0,0.0634158101939068,0,0.548257766857182,0,4.04503862027127,0.638812138197976,0,0,0,0.227662191351298,0.0887023701626388,0,0,0.203909198930495,0,0,0.222462803784138,0.235479278551542,0,0,0,0.215927591218621,0,0.214429632529969,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0.9164274741762,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0.981542335574726,0,2.5359343655004,0,3.853340637174,3.41626806259959,0,0.71421575442263,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,4.97501663675268,0.724030971033267,0.213233981900981,0,0,0.248298857183432,0.33639558774184,0.190941474834495,0,0.217716747896961,0,0.134704106029175,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p10@GALNT3 | |||
}} | }} |
Latest revision as of 23:55, 17 September 2015
Short description: | p10@GALNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_GALNT3_5end |
Coexpression cluster: | NA |
Association with transcript: | -135bp_to_ENST00000392701_5end |
EntrezGene: | GALNT3 |
HGNC: | 4125 |
UniProt: | Q14435 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.20e-12 | 5 |
basophil mast progenitor cell | 4.20e-12 | 5 |
bone matrix secreting cell | 2.87e-08 | 2 |
osteocyte | 2.87e-08 | 2 |
osteoclast | 2.87e-08 | 2 |
endocrine cell | 4.03e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.01e-20 | 3 |
gastrointestinal system mesentery | 3.01e-20 | 3 |
stomach region | 3.01e-20 | 3 |
mesentery | 3.01e-20 | 3 |
gastrointestinal system serosa | 3.01e-20 | 3 |
mesentery of stomach | 3.01e-20 | 3 |
gut mesentery | 3.01e-20 | 3 |
dorsal mesentery | 3.01e-20 | 3 |
dorsal mesogastrium | 3.01e-20 | 3 |
peritoneal cavity | 3.01e-20 | 3 |
spleen primordium | 3.01e-20 | 3 |
brainstem | 2.09e-10 | 6 |
hemopoietic organ | 3.17e-09 | 7 |
immune organ | 3.17e-09 | 7 |
posterior neural tube | 4.01e-09 | 15 |
chordal neural plate | 4.01e-09 | 15 |
dorsal plus ventral thalamus | 1.20e-08 | 2 |
thalamic complex | 1.20e-08 | 2 |
caudate nucleus | 1.73e-08 | 2 |
future caudate nucleus | 1.73e-08 | 2 |
locus ceruleus | 2.15e-08 | 2 |
brainstem nucleus | 2.15e-08 | 2 |
hindbrain nucleus | 2.15e-08 | 2 |
stomach | 3.51e-08 | 8 |
food storage organ | 3.51e-08 | 8 |
neural nucleus | 2.95e-07 | 9 |
nucleus of brain | 2.95e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue cancer | 2.77e-10 | 6 |
musculoskeletal system cancer | 2.77e-10 | 6 |
histiocytoma | 2.31e-08 | 2 |
malignant fibroxanthoma | 2.31e-08 | 2 |
giant cell tumor | 2.87e-08 | 2 |
bone giant cell tumor | 2.87e-08 | 2 |