FFCP PHASE1:Hg19::chr2:166060586..166060603,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:166060586..166060603,-
|short_description=p3@SCN3A
|description=CAGE_peak_3_at_SCN3A_5end
|association_with_transcript=-9bp_to_ENST00000360093,NM_001081676...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6328 | |EntrezGene=6328 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10590 | |HGNC=10590 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NY46,Q9C007 | |UniProt=Q9NY46,Q9C007 | ||
|association_with_transcript=-9bp_to_ENST00000360093,NM_001081676,NM_001081677,NM_006922,uc002ucx.2,uc002ucy.2,uc002ucz.2_5end | |||
|cluster_id=chr2:166060586..166060603,- | |||
|coexpression_cluster_id=C2665 | |||
|description=CAGE_peak_3_at_SCN3A_5end | |||
|id=chr2:166060586..166060603,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.41e-19;82!UBERON:0006215;5.72e-10;3!UBERON:0006241;3.19e-09;3!UBERON:0003057;3.19e-09;3!UBERON:0010122;4.32e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p3@SCN3A | |||
}} | }} |
Latest revision as of 23:33, 17 September 2015
Short description: | p3@SCN3A |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SCN3A_5end |
Coexpression cluster: | C2665_occipital_parietal_normal_temporal_duodenum_somatostatinoma_putamen |
Association with transcript: | -9bp_to_ENST00000360093, NM_001081676, NM_001081677, NM_006922, uc002ucx.2, uc002ucy.2, uc002ucz.2_5end |
EntrezGene: | SCN3A |
HGNC: | 10590 |
UniProt: | Q9NY46Q9C007 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data