FFCP PHASE1:Mm9::chr9:65270818..65270829,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=330962 | |EntrezGene=330962 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |MCL_coexpression_id=58 | ||
|TSSclassifier=NA | |||
|UniProt=Q80WK2 | |UniProt=Q80WK2 | ||
|association_with_transcript=-238bp_to_ENSMUST00000065894,NM_178933,uc009qdg.1_5end | |association_with_transcript=-238bp_to_ENSMUST00000065894,NM_178933,uc009qdg.1_5end | ||
|cluster_id=chr9:65270818..65270829,- | |||
|description=CAGE_peak_8_at_Ostb_5end | |description=CAGE_peak_8_at_Ostb_5end | ||
|id=chr9:65270818..65270829,- | |id=chr9:65270818..65270829,- | ||
|ontology_enrichment_celltype=CL:0000239!1.88e-12!6;CL:0000677!1.88e-12!6;CL:0000212!1.88e-12!6;CL:0000584!1.88e-12!6;CL:0000075!1.52e-10!7;CL:0002563!5.31e-08!9;CL:0002251!5.31e-08!9;CL:0000473!1.20e-07!3;CL:0000627!1.20e-07!3;CL:0000682!1.20e-07!3 | |ontology_enrichment_celltype=CL:0000239!1.88e-12!6;CL:0000677!1.88e-12!6;CL:0000212!1.88e-12!6;CL:0000584!1.88e-12!6;CL:0000075!1.52e-10!7;CL:0002563!5.31e-08!9;CL:0002251!5.31e-08!9;CL:0000473!1.20e-07!3;CL:0000627!1.20e-07!3;CL:0000682!1.20e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.47e-18,6;CL:0000677,1.47e-18,6;CL:0000584,1.47e-18,6;CL:0000075,7.93e-16,7;CL:0002563,3.53e-12,9;CL:0002251,3.53e-12,9;CL:0000682,4.58e-11,3;CL:0000066,4.31e-09,25;CL:0002076,4.65e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.72e-27!43;UBERON:0005409!1.34e-19!59;UBERON:0000344!1.90e-18!15;UBERON:0001242!8.60e-15!13;UBERON:0000060!8.60e-15!13;UBERON:0001262!8.60e-15!13;UBERON:0004786!8.60e-15!13;UBERON:0004923!2.17e-10!24;UBERON:0003350!5.31e-08!9;UBERON:0004808!5.31e-08!9;UBERON:0001277!5.31e-08!9;UBERON:0000331!1.76e-07!3;UBERON:0002116!1.76e-07!3;UBERON:0001204!1.76e-07!3;UBERON:0001168!1.76e-07!3;UBERON:0002113!2.54e-07!14;UBERON:0003918!2.54e-07!14;UBERON:0005095!2.54e-07!14;UBERON:0007687!2.54e-07!14;UBERON:0001007!8.76e-07!128;UBERON:0001555!8.76e-07!128;UBERON:0007026!8.76e-07!128 | |ontology_enrichment_uberon=UBERON:0000160!1.72e-27!43;UBERON:0005409!1.34e-19!59;UBERON:0000344!1.90e-18!15;UBERON:0001242!8.60e-15!13;UBERON:0000060!8.60e-15!13;UBERON:0001262!8.60e-15!13;UBERON:0004786!8.60e-15!13;UBERON:0004923!2.17e-10!24;UBERON:0003350!5.31e-08!9;UBERON:0004808!5.31e-08!9;UBERON:0001277!5.31e-08!9;UBERON:0000331!1.76e-07!3;UBERON:0002116!1.76e-07!3;UBERON:0001204!1.76e-07!3;UBERON:0001168!1.76e-07!3;UBERON:0002113!2.54e-07!14;UBERON:0003918!2.54e-07!14;UBERON:0005095!2.54e-07!14;UBERON:0007687!2.54e-07!14;UBERON:0001007!8.76e-07!128;UBERON:0001555!8.76e-07!128;UBERON:0007026!8.76e-07!128 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.56e-32,31;UBERON:0000344,1.21e-28,15;UBERON:0001242,6.93e-23,13;UBERON:0001262,6.93e-23,13;UBERON:0004786,6.93e-23,13;UBERON:0005409,3.91e-20,47;UBERON:0004923,5.26e-17,24;UBERON:0002108,1.09e-13,4;UBERON:0003350,3.53e-12,9;UBERON:0004808,3.53e-12,9;UBERON:0001277,3.53e-12,9;UBERON:0000331,8.32e-11,3;UBERON:0002116,8.32e-11,3;UBERON:0001204,8.32e-11,3;UBERON:0001168,8.32e-11,3;UBERON:0000485,7.47e-10,11;UBERON:0001007,1.01e-07,116;UBERON:0001555,1.01e-07,116;UBERON:0007026,1.01e-07,116;UBERON:0001962,1.35e-07,2;UBERON:0001961,1.35e-07,2;UBERON:0001744,1.35e-07,2;UBERON:0004119,1.62e-07,118;UBERON:0000925,1.62e-07,118;UBERON:0006595,1.62e-07,118;UBERON:0001155,5.68e-07,2;UBERON:0000059,5.68e-07,2 | |||
|phase1_expression=0,24.7772539423946,27.2999543633722,2.41971369045464,3.50627010962443,2.35030980676646,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,7.03966660290989,5.73523202667925,36.7508457033613,16.3689558540448,15.0829862880122,11.2113817479261,6.5527833737582,19.9557459589774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,4.34276993854605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,1.05780226665418,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.951128130562796,3.32170343081158,2.79988223030818,0.754005626400808,0.596869416123452,0.38992817423824,5.39291645192533,3.02593269824572,2.98711909881551,0,0.114248512609729,0,0.407302655690628,0.387904974335251,0.701358198903186,1.26473074248515,3.39503340353085,4.23896565171712,2.71473760627961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95517422270746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,24.7772539423946,27.2999543633722,2.41971369045464,3.50627010962443,2.35030980676646,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,7.03966660290989,5.73523202667925,36.7508457033613,16.3689558540448,15.0829862880122,11.2113817479261,6.5527833737582,19.9557459589774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,4.34276993854605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,1.05780226665418,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.951128130562796,3.32170343081158,2.79988223030818,0.754005626400808,0.596869416123452,0.38992817423824,5.39291645192533,3.02593269824572,2.98711909881551,0,0.114248512609729,0,0.407302655690628,0.387904974335251,0.701358198903186,1.26473074248515,3.39503340353085,4.23896565171712,2.71473760627961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95517422270746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p8@Ostb | |short_description=p8@Ostb | ||
}} | }} |
Latest revision as of 00:21, 27 September 2015
Short description: | p8@Ostb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Ostb_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | -238bp_to_ENSMUST00000065894, NM_178933, uc009qdg.1_5end |
EntrezGene: | Ostb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.47e-18 | 6 |
gut absorptive cell | 1.47e-18 | 6 |
enterocyte | 1.47e-18 | 6 |
columnar/cuboidal epithelial cell | 7.93e-16 | 7 |
intestinal epithelial cell | 3.53e-12 | 9 |
epithelial cell of alimentary canal | 3.53e-12 | 9 |
M cell of gut | 4.58e-11 | 3 |
epithelial cell | 4.31e-09 | 25 |
endo-epithelial cell | 4.65e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.56e-32 | 31 |
mucosa | 1.21e-28 | 15 |
intestinal mucosa | 6.93e-23 | 13 |
wall of intestine | 6.93e-23 | 13 |
gastrointestinal system mucosa | 6.93e-23 | 13 |
gastrointestinal system | 3.91e-20 | 47 |
organ component layer | 5.26e-17 | 24 |
small intestine | 1.09e-13 | 4 |
epithelium of mucosa | 3.53e-12 | 9 |
gastrointestinal system epithelium | 3.53e-12 | 9 |
intestinal epithelium | 3.53e-12 | 9 |
ileal mucosa | 8.32e-11 | 3 |
ileum | 8.32e-11 | 3 |
mucosa of small intestine | 8.32e-11 | 3 |
wall of small intestine | 8.32e-11 | 3 |
simple columnar epithelium | 7.47e-10 | 11 |
digestive system | 1.01e-07 | 116 |
digestive tract | 1.01e-07 | 116 |
primitive gut | 1.01e-07 | 116 |
gut-associated lymphoid tissue | 1.35e-07 | 2 |
mucosa-associated lymphoid tissue | 1.35e-07 | 2 |
lymphoid tissue | 1.35e-07 | 2 |
endoderm-derived structure | 1.62e-07 | 118 |
endoderm | 1.62e-07 | 118 |
presumptive endoderm | 1.62e-07 | 118 |
colon | 5.68e-07 | 2 |
large intestine | 5.68e-07 | 2 |