FFCP PHASE1:Mm9::chr6:3444587..3444598,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=101202 | |EntrezGene=101202 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=274 | |MCL_coexpression_id=274 | ||
|TSSclassifier=NA | |||
|UniProt=Q4VAH7 | |UniProt=Q4VAH7 | ||
|association_with_transcript=-89bp_to_ENSMUST00000049985,NM_178899,uc009auz.1_5end | |association_with_transcript=-89bp_to_ENSMUST00000049985,NM_178899,uc009auz.1_5end | ||
|cluster_id=chr6:3444587..3444598,- | |||
|description=CAGE_peak_3_at_Hepacam2_5end | |description=CAGE_peak_3_at_Hepacam2_5end | ||
|id=chr6:3444587..3444598,- | |id=chr6:3444587..3444598,- | ||
|ontology_enrichment_celltype=CL:0002563!7.93e-09!9;CL:0002251!7.93e-09!9 | |ontology_enrichment_celltype=CL:0002563!7.93e-09!9;CL:0002251!7.93e-09!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,3.38e-10,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.67e-32!43;UBERON:0005409!1.01e-24!59;UBERON:0000344!7.92e-17!15;UBERON:0001242!2.39e-14!13;UBERON:0000060!2.39e-14!13;UBERON:0001262!2.39e-14!13;UBERON:0004786!2.39e-14!13;UBERON:0004923!6.32e-09!24;UBERON:0003350!7.93e-09!9;UBERON:0004808!7.93e-09!9;UBERON:0001277!7.93e-09!9;UBERON:0002108!3.60e-08!16;UBERON:0001007!4.58e-08!128;UBERON:0001555!4.58e-08!128;UBERON:0007026!4.58e-08!128;UBERON:0004119!9.02e-08!130;UBERON:0000925!9.02e-08!130;UBERON:0006595!9.02e-08!130;UBERON:0004921!5.73e-07!126;UBERON:0004185!5.73e-07!126;UBERON:0000485!6.76e-07!11 | |ontology_enrichment_uberon=UBERON:0000160!5.67e-32!43;UBERON:0005409!1.01e-24!59;UBERON:0000344!7.92e-17!15;UBERON:0001242!2.39e-14!13;UBERON:0000060!2.39e-14!13;UBERON:0001262!2.39e-14!13;UBERON:0004786!2.39e-14!13;UBERON:0004923!6.32e-09!24;UBERON:0003350!7.93e-09!9;UBERON:0004808!7.93e-09!9;UBERON:0001277!7.93e-09!9;UBERON:0002108!3.60e-08!16;UBERON:0001007!4.58e-08!128;UBERON:0001555!4.58e-08!128;UBERON:0007026!4.58e-08!128;UBERON:0004119!9.02e-08!130;UBERON:0000925!9.02e-08!130;UBERON:0006595!9.02e-08!130;UBERON:0004921!5.73e-07!126;UBERON:0004185!5.73e-07!126;UBERON:0000485!6.76e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.21e-28,31;UBERON:0005409,3.77e-20,47;UBERON:0000344,1.76e-17,15;UBERON:0002108,1.33e-14,4;UBERON:0001242,1.21e-12,13;UBERON:0001262,1.21e-12,13;UBERON:0004786,1.21e-12,13;UBERON:0000331,8.99e-12,3;UBERON:0002116,8.99e-12,3;UBERON:0001204,8.99e-12,3;UBERON:0001168,8.99e-12,3;UBERON:0004923,2.37e-10,24;UBERON:0001007,5.66e-09,116;UBERON:0001555,5.66e-09,116;UBERON:0007026,5.66e-09,116;UBERON:0004119,9.45e-09,118;UBERON:0000925,9.45e-09,118;UBERON:0006595,9.45e-09,118;UBERON:0001155,8.45e-08,2;UBERON:0000059,8.45e-08,2;UBERON:0001962,1.96e-07,2;UBERON:0001961,1.96e-07,2;UBERON:0001744,1.96e-07,2;UBERON:0004921,3.90e-07,114 | |||
|phase1_expression=0,1.04692622291808,0.454999239389536,0.30246421130683,0,4.36486106970913,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,2.71987118748791,1.37645568640302,1.14846392823004,1.7230479846363,2.37018355954478,7.22088993934221,4.78857246543868,4.6563407237614,0,0,0,0.577703239502549,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95628174475697,2.90895623329899,0,0,0.38660238396628,0.605050573870028,1.11189021922435,0.190225626112559,1.42358718463353,1.15289268306808,0.754005626400808,0.198956472041151,0.779856348476481,1.79763881730844,3.6743468478698,5.37681437786791,0,0,0,0,0.387904974335251,0,0.316182685621286,0.295220295959204,0,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0,0.632073515871632,1.05418608574999,0,2.7235168460303,0,0,0,0.532020700926821,0.713475270408282,0.329098041204242,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0,0,0,0,3.6292192521702,3.10669656543463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0,0,0,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0.145346416632329,0.188218760830661,0,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,1.04692622291808,0.454999239389536,0.30246421130683,0,4.36486106970913,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,2.71987118748791,1.37645568640302,1.14846392823004,1.7230479846363,2.37018355954478,7.22088993934221,4.78857246543868,4.6563407237614,0,0,0,0.577703239502549,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95628174475697,2.90895623329899,0,0,0.38660238396628,0.605050573870028,1.11189021922435,0.190225626112559,1.42358718463353,1.15289268306808,0.754005626400808,0.198956472041151,0.779856348476481,1.79763881730844,3.6743468478698,5.37681437786791,0,0,0,0,0.387904974335251,0,0.316182685621286,0.295220295959204,0,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0,0.632073515871632,1.05418608574999,0,2.7235168460303,0,0,0,0.532020700926821,0.713475270408282,0.329098041204242,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0,0,0,0,3.6292192521702,3.10669656543463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0,0,0,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0.145346416632329,0.188218760830661,0,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p3@Hepacam2 | |short_description=p3@Hepacam2 | ||
}} | }} |
Latest revision as of 02:18, 27 September 2015
Short description: | p3@Hepacam2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Hepacam2_5end |
Coexpression cluster: | MCL_coexpression_mm9:274 |
Association with transcript: | -89bp_to_ENSMUST00000049985, NM_178899, uc009auz.1_5end |
EntrezGene: | Hepacam2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 3.38e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.21e-28 | 31 |
gastrointestinal system | 3.77e-20 | 47 |
mucosa | 1.76e-17 | 15 |
small intestine | 1.33e-14 | 4 |
intestinal mucosa | 1.21e-12 | 13 |
wall of intestine | 1.21e-12 | 13 |
gastrointestinal system mucosa | 1.21e-12 | 13 |
ileal mucosa | 8.99e-12 | 3 |
ileum | 8.99e-12 | 3 |
mucosa of small intestine | 8.99e-12 | 3 |
wall of small intestine | 8.99e-12 | 3 |
organ component layer | 2.37e-10 | 24 |
digestive system | 5.66e-09 | 116 |
digestive tract | 5.66e-09 | 116 |
primitive gut | 5.66e-09 | 116 |
endoderm-derived structure | 9.45e-09 | 118 |
endoderm | 9.45e-09 | 118 |
presumptive endoderm | 9.45e-09 | 118 |
colon | 8.45e-08 | 2 |
large intestine | 8.45e-08 | 2 |
gut-associated lymphoid tissue | 1.96e-07 | 2 |
mucosa-associated lymphoid tissue | 1.96e-07 | 2 |
lymphoid tissue | 1.96e-07 | 2 |
subdivision of digestive tract | 3.90e-07 | 114 |