FFCP PHASE1:Hg19::chr15:71228905..71228915,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54839 | |EntrezGene=54839 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25965 | |HGNC=25965 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=31bp_to_ENST00000558808,ENST00000559069,ENST00000559806_5end | |association_with_transcript=31bp_to_ENST00000558808,ENST00000559069,ENST00000559806_5end | ||
|cluster_id=chr15:71228905..71228915,+ | |||
|description=CAGE_peak_17_at_LRRC49_5end | |description=CAGE_peak_17_at_LRRC49_5end | ||
|id=chr15:71228905..71228915,+ | |id=chr15:71228905..71228915,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.36e-07;82 | |ontology_enrichment_development_v019=UBERON:0006601;6.36e-07;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.14e-69!57;UBERON:0005068!1.14e-69!57;UBERON:0006241!1.14e-69!57;UBERON:0007135!1.14e-69!57;UBERON:0002616!1.52e-57!59;UBERON:0003075!8.02e-55!86;UBERON:0007284!8.02e-55!86;UBERON:0005743!4.55e-54!86;UBERON:0001017!2.89e-53!82;UBERON:0002346!3.95e-52!90;UBERON:0000955!1.65e-51!69;UBERON:0006238!1.65e-51!69;UBERON:0007023!1.38e-48!115;UBERON:0000073!1.87e-48!94;UBERON:0001016!1.87e-48!94;UBERON:0002780!3.35e-40!41;UBERON:0001890!3.35e-40!41;UBERON:0006240!3.35e-40!41;UBERON:0003080!3.63e-39!42;UBERON:0003076!1.21e-33!15;UBERON:0003057!1.21e-33!15;UBERON:0001950!1.40e-32!20;UBERON:0002020!8.09e-30!34;UBERON:0003528!8.09e-30!34;UBERON:0001893!1.51e-29!34;UBERON:0002619!1.55e-29!22;UBERON:0000033!7.88e-29!123;UBERON:0003056!8.74e-29!61;UBERON:0001869!1.84e-27!32;UBERON:0000153!3.16e-27!129;UBERON:0007811!3.16e-27!129;UBERON:0004733!3.60e-27!12;UBERON:0002028!3.60e-27!12;UBERON:0007277!3.60e-27!12;UBERON:0004121!2.42e-26!169;UBERON:0002791!2.46e-26!33;UBERON:0000956!7.52e-26!25;UBERON:0000203!7.52e-26!25;UBERON:0000924!1.36e-25!173;UBERON:0006601!1.36e-25!173;UBERON:0004732!5.50e-25!13;UBERON:0002298!1.32e-23!8;UBERON:0000025!1.66e-22!194;UBERON:0000988!4.03e-17!3;UBERON:0004111!7.88e-17!241;UBERON:0001872!9.02e-17!5;UBERON:0001896!2.57e-16!3;UBERON:0005290!2.57e-16!3;UBERON:0010096!2.57e-16!3;UBERON:0000483!6.47e-15!309;UBERON:0002680!8.47e-15!9;UBERON:0001895!8.47e-15!9;UBERON:0010092!8.47e-15!9;UBERON:0000119!1.05e-14!312;UBERON:0000200!6.70e-14!6;UBERON:0003296!3.42e-13!4;UBERON:0010133!3.42e-13!4;UBERON:0000477!3.93e-13!286;UBERON:0001894!1.03e-12!7;UBERON:0006222!1.03e-12!7;UBERON:0001905!3.17e-12!2;UBERON:0002757!3.17e-12!2;UBERON:0010134!3.17e-12!2;UBERON:0002784!3.17e-12!2;UBERON:0005408!3.17e-12!2;UBERON:0001899!3.17e-12!2;UBERON:0002148!7.52e-12!2;UBERON:0009662!7.52e-12!2;UBERON:0000064!2.61e-10!219;UBERON:0002021!6.54e-10!5;UBERON:0006331!3.55e-08!3;UBERON:0002240!4.09e-08!3;UBERON:0000475!6.01e-08!365;UBERON:0000481!6.66e-08!347;UBERON:0002771!1.04e-07!3;UBERON:0000062!1.63e-07!511;UBERON:0002079!7.77e-07!1 | |ontology_enrichment_uberon=UBERON:0001049!1.14e-69!57;UBERON:0005068!1.14e-69!57;UBERON:0006241!1.14e-69!57;UBERON:0007135!1.14e-69!57;UBERON:0002616!1.52e-57!59;UBERON:0003075!8.02e-55!86;UBERON:0007284!8.02e-55!86;UBERON:0005743!4.55e-54!86;UBERON:0001017!2.89e-53!82;UBERON:0002346!3.95e-52!90;UBERON:0000955!1.65e-51!69;UBERON:0006238!1.65e-51!69;UBERON:0007023!1.38e-48!115;UBERON:0000073!1.87e-48!94;UBERON:0001016!1.87e-48!94;UBERON:0002780!3.35e-40!41;UBERON:0001890!3.35e-40!41;UBERON:0006240!3.35e-40!41;UBERON:0003080!3.63e-39!42;UBERON:0003076!1.21e-33!15;UBERON:0003057!1.21e-33!15;UBERON:0001950!1.40e-32!20;UBERON:0002020!8.09e-30!34;UBERON:0003528!8.09e-30!34;UBERON:0001893!1.51e-29!34;UBERON:0002619!1.55e-29!22;UBERON:0000033!7.88e-29!123;UBERON:0003056!8.74e-29!61;UBERON:0001869!1.84e-27!32;UBERON:0000153!3.16e-27!129;UBERON:0007811!3.16e-27!129;UBERON:0004733!3.60e-27!12;UBERON:0002028!3.60e-27!12;UBERON:0007277!3.60e-27!12;UBERON:0004121!2.42e-26!169;UBERON:0002791!2.46e-26!33;UBERON:0000956!7.52e-26!25;UBERON:0000203!7.52e-26!25;UBERON:0000924!1.36e-25!173;UBERON:0006601!1.36e-25!173;UBERON:0004732!5.50e-25!13;UBERON:0002298!1.32e-23!8;UBERON:0000025!1.66e-22!194;UBERON:0000988!4.03e-17!3;UBERON:0004111!7.88e-17!241;UBERON:0001872!9.02e-17!5;UBERON:0001896!2.57e-16!3;UBERON:0005290!2.57e-16!3;UBERON:0010096!2.57e-16!3;UBERON:0000483!6.47e-15!309;UBERON:0002680!8.47e-15!9;UBERON:0001895!8.47e-15!9;UBERON:0010092!8.47e-15!9;UBERON:0000119!1.05e-14!312;UBERON:0000200!6.70e-14!6;UBERON:0003296!3.42e-13!4;UBERON:0010133!3.42e-13!4;UBERON:0000477!3.93e-13!286;UBERON:0001894!1.03e-12!7;UBERON:0006222!1.03e-12!7;UBERON:0001905!3.17e-12!2;UBERON:0002757!3.17e-12!2;UBERON:0010134!3.17e-12!2;UBERON:0002784!3.17e-12!2;UBERON:0005408!3.17e-12!2;UBERON:0001899!3.17e-12!2;UBERON:0002148!7.52e-12!2;UBERON:0009662!7.52e-12!2;UBERON:0000064!2.61e-10!219;UBERON:0002021!6.54e-10!5;UBERON:0006331!3.55e-08!3;UBERON:0002240!4.09e-08!3;UBERON:0000475!6.01e-08!365;UBERON:0000481!6.66e-08!347;UBERON:0002771!1.04e-07!3;UBERON:0000062!1.63e-07!511;UBERON:0002079!7.77e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0003296;2.28e-110;4!UBERON:0010133;2.28e-110;4!UBERON:0001905;1.55e-98;2!UBERON:0002757;1.55e-98;2!UBERON:0010134;1.55e-98;2!UBERON:0005408;1.55e-98;2!UBERON:0001899;1.55e-98;2!UBERON:0001894;1.18e-63;7!UBERON:0002784;5.14e-50;4!UBERON:0000007;8.10e-26;2!UBERON:0000988;7.35e-18;3!UBERON:0002368;1.11e-11;33!UBERON:0000073;1.53e-11;53!UBERON:0002616;1.53e-11;53!UBERON:0002298;1.27e-09;6!UBERON:0000949;1.39e-09;43!UBERON:0002780;2.72e-08;41!UBERON:0001890;2.72e-08;41!UBERON:0000955;8.06e-08;68!UBERON:0002680;7.69e-07;9!UBERON:0001895;7.69e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0003296;2.28e-110;4!UBERON:0010133;2.28e-110;4!UBERON:0001905;1.55e-98;2!UBERON:0002757;1.55e-98;2!UBERON:0010134;1.55e-98;2!UBERON:0005408;1.55e-98;2!UBERON:0001899;1.55e-98;2!UBERON:0001894;1.18e-63;7!UBERON:0002784;5.14e-50;4!UBERON:0000007;8.10e-26;2!UBERON:0000988;7.35e-18;3!UBERON:0002368;1.11e-11;33!UBERON:0000073;1.53e-11;53!UBERON:0002616;1.53e-11;53!UBERON:0002298;1.27e-09;6!UBERON:0000949;1.39e-09;43!UBERON:0002780;2.72e-08;41!UBERON:0001890;2.72e-08;41!UBERON:0000955;8.06e-08;68!UBERON:0002680;7.69e-07;9!UBERON:0001895;7.69e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,2.76e-110,4;UBERON:0010133,2.76e-110,4;UBERON:0001905,1.55e-98,2;UBERON:0002757,1.55e-98,2;UBERON:0010134,1.55e-98,2;UBERON:0005408,1.55e-98,2;UBERON:0001899,1.55e-98,2;UBERON:0001894,1.31e-63,7;UBERON:0006222,1.31e-63,7;UBERON:0002784,5.14e-50,4;UBERON:0000007,9.18e-26,2;UBERON:0000988,6.76e-18,3;UBERON:0000073,1.70e-15,53;UBERON:0002616,1.70e-15,53;UBERON:0001049,9.92e-15,56;UBERON:0005068,9.92e-15,56;UBERON:0006241,9.92e-15,56;UBERON:0007135,9.92e-15,56;UBERON:0002368,1.35e-13,35;UBERON:0000955,3.68e-12,68;UBERON:0006238,3.68e-12,68;UBERON:0002780,1.73e-11,41;UBERON:0001890,1.73e-11,41;UBERON:0003080,1.73e-11,41;UBERON:0006240,1.73e-11,41;UBERON:0000949,8.78e-11,45;UBERON:0001017,2.17e-10,81;UBERON:0003075,2.17e-10,82;UBERON:0007284,2.17e-10,82;UBERON:0002346,5.98e-10,86;UBERON:0002298,1.22e-09,6;UBERON:0001016,1.88e-09,89;UBERON:0002530,1.98e-08,59;UBERON:0010371,2.22e-08,104;UBERON:0003056,4.61e-08,61;UBERON:0007023,8.86e-08,114;UBERON:0002680,7.48e-07,9;UBERON:0001895,7.48e-07,9;UBERON:0010092,7.48e-07,9;UBERON:0010314,8.99e-07,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331737779793674,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865554558968364,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.1251909307065,0.573409195690071,0.221858103073705,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0.615349092722265,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0.781078098613847,0.206686796501184,0.253663240775627,0,0,0,0,0,2.67850917939143,1.68141861109412,1.21393120847326,0,0,0,0,2.7867590520501,0.197318320688547,0,0,0,0.314231179832004,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331737779793674,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865554558968364,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.1251909307065,0.573409195690071,0.221858103073705,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0.615349092722265,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0.781078098613847,0.206686796501184,0.253663240775627,0,0,0,0,0,2.67850917939143,1.68141861109412,1.21393120847326,0,0,0,0,2.7867590520501,0.197318320688547,0,0,0,0.314231179832004,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p17@LRRC49 | |short_description=p17@LRRC49 | ||
}} | }} |
Latest revision as of 21:07, 18 September 2015
Short description: | p17@LRRC49 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_LRRC49_5end |
Coexpression cluster: | NA |
Association with transcript: | 31bp_to_ENST00000558808, ENST00000559069, ENST00000559806_5end |
EntrezGene: | LRRC49 |
HGNC: | 25965 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data