FFCP PHASE1:Hg19::chr20:43029862..43029900,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3172 | |EntrezGene=3172 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5024 | |HGNC=5024 | ||
|TSSclassifier=strong | |||
|UniProt=F8WBS7 | |UniProt=F8WBS7 | ||
|association_with_transcript=-9bp_to_ENST00000372920_5end | |association_with_transcript=-9bp_to_ENST00000372920_5end | ||
|cluster_id=chr20:43029862..43029900,+ | |||
|coexpression_cluster_id=C304 | |coexpression_cluster_id=C304 | ||
|description=CAGE_peak_1_at_HNF4A_5end | |description=CAGE_peak_1_at_HNF4A_5end | ||
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|ontology_enrichment_celltype=CL:0000181!2.84e-16!12;CL:0000417!2.84e-16!12;CL:0000668!2.84e-16!12;CL:0000414!2.84e-16!12;CL:0000412!2.84e-16!12;CL:0000182!2.84e-16!12;CL:0002322!2.18e-09!5;CL:0002150!1.19e-08!3;CL:0000861!1.19e-08!3 | |ontology_enrichment_celltype=CL:0000181!2.84e-16!12;CL:0000417!2.84e-16!12;CL:0000668!2.84e-16!12;CL:0000414!2.84e-16!12;CL:0000412!2.84e-16!12;CL:0000182!2.84e-16!12;CL:0002322!2.18e-09!5;CL:0002150!1.19e-08!3;CL:0000861!1.19e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.06e-30;12!CL:0002563;9.76e-07;4 | |ontology_enrichment_celltype_v019=CL:0000182;1.06e-30;12!CL:0002563;9.76e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.08e-30,12;CL:0000223,3.35e-12,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.96e-33;11!UBERON:0009497;1.48e-27;13!UBERON:0003104;3.19e-20;31!UBERON:0001041;2.98e-11;30!CL:0000223;1.28e-07;58!UBERON:0001045;7.51e-07;1!UBERON:0006242;7.51e-07;1 | |ontology_enrichment_development_v019=UBERON:0004161;8.96e-33;11!UBERON:0009497;1.48e-27;13!UBERON:0003104;3.19e-20;31!UBERON:0001041;2.98e-11;30!CL:0000223;1.28e-07;58!UBERON:0001045;7.51e-07;1!UBERON:0006242;7.51e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000160;2.02e-30;17!UBERON:0002107;1.45e-29;19!UBERON:0006925;1.45e-29;19!UBERON:0002423;1.56e-26;25!UBERON:0005409;2.01e-23;22!UBERON:0000059;3.30e-18;11!UBERON:0002365;5.19e-17;31!UBERON:0002330;5.19e-17;31!UBERON:0001155;9.02e-16;9!UBERON:0002368;8.55e-15;33!UBERON:0004921;1.40e-14;33!UBERON:0001007;5.16e-13;81!UBERON:0002108;2.60e-11;4!UBERON:0000949;3.39e-11;43!UBERON:0004907;1.08e-10;5!UBERON:0005172;1.91e-10;52!UBERON:0005173;1.91e-10;52!UBERON:0002417;6.41e-08;58!UBERON:0000916;6.41e-08;58!UBERON:0001301;6.88e-07;1!UBERON:0001154;7.51e-07;1!UBERON:0001153;7.51e-07;1!UBERON:0009854;7.51e-07;1!UBERON:0001242;9.76e-07;4!UBERON:0001262;9.76e-07;4!UBERON:0004786;9.76e-07;4!UBERON:0004808;9.76e-07;4!UBERON:0001277;9.76e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000160;2.02e-30;17!UBERON:0002107;1.45e-29;19!UBERON:0006925;1.45e-29;19!UBERON:0002423;1.56e-26;25!UBERON:0005409;2.01e-23;22!UBERON:0000059;3.30e-18;11!UBERON:0002365;5.19e-17;31!UBERON:0002330;5.19e-17;31!UBERON:0001155;9.02e-16;9!UBERON:0002368;8.55e-15;33!UBERON:0004921;1.40e-14;33!UBERON:0001007;5.16e-13;81!UBERON:0002108;2.60e-11;4!UBERON:0000949;3.39e-11;43!UBERON:0004907;1.08e-10;5!UBERON:0005172;1.91e-10;52!UBERON:0005173;1.91e-10;52!UBERON:0002417;6.41e-08;58!UBERON:0000916;6.41e-08;58!UBERON:0001301;6.88e-07;1!UBERON:0001154;7.51e-07;1!UBERON:0001153;7.51e-07;1!UBERON:0009854;7.51e-07;1!UBERON:0001242;9.76e-07;4!UBERON:0001262;9.76e-07;4!UBERON:0004786;9.76e-07;4!UBERON:0004808;9.76e-07;4!UBERON:0001277;9.76e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.98e-30,17;UBERON:0002107,1.47e-29,19;UBERON:0006925,1.47e-29,19;UBERON:0008836,1.47e-29,19;UBERON:0009854,5.05e-29,23;UBERON:0009497,1.60e-26,25;UBERON:0000015,1.60e-26,25;UBERON:0002423,1.60e-26,25;UBERON:0006235,1.60e-26,25;UBERON:0004161,1.60e-26,25;UBERON:0009856,1.97e-25,26;UBERON:0008835,2.80e-25,22;UBERON:0003894,2.80e-25,22;UBERON:0007499,5.01e-22,25;UBERON:0005409,1.62e-20,25;UBERON:0004921,4.21e-19,118;UBERON:0003929,1.97e-18,54;UBERON:0005172,2.27e-18,54;UBERON:0005173,2.27e-18,54;UBERON:0000059,3.35e-18,11;UBERON:0002365,2.08e-17,31;UBERON:0002330,2.08e-17,31;UBERON:0001007,2.82e-16,145;UBERON:0001555,2.82e-16,145;UBERON:0007026,2.82e-16,145;UBERON:0002417,3.05e-16,60;UBERON:0000916,3.05e-16,60;UBERON:0001155,9.16e-16,9;UBERON:0002368,3.29e-15,35;UBERON:0004119,2.63e-14,160;UBERON:0000925,2.63e-14,160;UBERON:0006595,2.63e-14,160;UBERON:0000949,9.13e-14,45;UBERON:0005911,6.85e-13,82;UBERON:0002108,2.51e-11,4;UBERON:0005177,2.56e-11,101;UBERON:0004907,1.09e-10,5;UBERON:0002530,4.38e-10,59;UBERON:0011216,9.40e-09,223;UBERON:0009569,1.39e-08,112;UBERON:0003104,6.08e-08,160;UBERON:0009142,6.08e-08,160;UBERON:0001301,6.88e-07,1;UBERON:0001154,7.29e-07,1;UBERON:0001153,7.29e-07,1;UBERON:0001045,7.29e-07,1 | |||
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|short_description=p1@HNF4A | |short_description=p1@HNF4A | ||
}} | }} |
Latest revision as of 07:58, 16 September 2015
Short description: | p1@HNF4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HNF4A_5end |
Coexpression cluster: | [[Coexpression cluster:C304|]] |
Association with transcript: | -9bp_to_ENST00000372920_5end |
EntrezGene: | HNF4A |
HGNC: | 5024 |
UniProt: | F8WBS7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.08e-30 | 12 |
endodermal cell | 3.35e-12 | 58 |