FFCP PHASE1:Hg19::chr22:41865258..41865306,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr22:41865258..41865306,+
|short_description=p2@ACO2
|description=CAGE_peak_2_at_ACO2_5end
|association_with_transcript=94bp_to_ENST00000471094_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=50 | |EntrezGene=50 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=118 | |HGNC=118 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=94bp_to_ENST00000471094_5end | |||
|cluster_id=chr22:41865258..41865306,+ | |||
|description=CAGE_peak_2_at_ACO2_5end | |||
|id=chr22:41865258..41865306,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.24e-08!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.10e-10;1!UBERON:0006222;6.61e-10;1!UBERON:0006242;6.61e-10;1 | |||
|ontology_enrichment_disease=DOID:305!7.68e-11!106;DOID:0050687!3.97e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3151;2.37e-10;1!DOID:3149;2.37e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,2.59e-10,1;DOID:3149,2.59e-10,1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000369;3.77e-20;4!UBERON:0002435;3.77e-20;4!UBERON:0000204;3.77e-20;4!UBERON:0005383;1.15e-12;3!UBERON:0005382;1.15e-12;3!UBERON:0000160;4.64e-12;17!UBERON:0009663;9.08e-12;7!UBERON:0001874;2.37e-10;1!UBERON:0001882;6.61e-10;1!UBERON:0002372;6.61e-10;1!UBERON:0001961;6.61e-10;1!UBERON:0001744;6.61e-10;1!UBERON:0001042;6.61e-10;1!UBERON:0005403;6.61e-10;1!UBERON:0001735;6.61e-10;1!UBERON:0005409;2.10e-09;22!UBERON:0001155;2.71e-09;9!UBERON:0002420;2.87e-09;9!UBERON:0000125;2.87e-09;9!UBERON:0007245;2.87e-09;9!UBERON:0002308;2.87e-09;9!UBERON:0010009;2.87e-09;9!UBERON:0010011;2.87e-09;9!UBERON:0000454;2.87e-09;9!UBERON:0004921;2.69e-08;33!UBERON:0002108;5.21e-08;4!UBERON:0000059;1.09e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.96e-20,4;UBERON:0002435,1.96e-20,4;UBERON:0000204,1.96e-20,4;UBERON:0010082,1.96e-20,4;UBERON:0005383,8.34e-13,3;UBERON:0005382,8.34e-13,3;UBERON:0000160,4.49e-12,17;UBERON:0009663,6.28e-12,7;UBERON:0001874,2.37e-10,1;UBERON:0001882,4.44e-10,1;UBERON:0005403,4.44e-10,1;UBERON:0002372,1.17e-09,1;UBERON:0001961,1.17e-09,1;UBERON:0001744,1.17e-09,1;UBERON:0001735,1.17e-09,1;UBERON:0002420,2.16e-09,9;UBERON:0000125,2.16e-09,9;UBERON:0007245,2.16e-09,9;UBERON:0002308,2.16e-09,9;UBERON:0010009,2.16e-09,9;UBERON:0010011,2.16e-09,9;UBERON:0000454,2.16e-09,9;UBERON:0001155,2.56e-09,9;UBERON:0005409,2.62e-08,25;UBERON:0002108,5.31e-08,4;UBERON:0000059,1.04e-07,11;UBERON:0007023,1.93e-07,114 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0.0821005894499457,0.236132343941038,0,0.767658796194425,0,0,0,0.369754010166788,0.309868802321207,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802320587350522,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,1.48313777113772,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.545492241181669,0,0.243947412259191,0.265059536642971,0.232387885739037,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0.330881918197182,0.435758888184812,0.237270619111097,0.269662616320329,0.784885860501384,0.769494313892781,0,0,0,0,0,0,0,0,0.614942192715568,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0.858486162094873,0,0,0.148631162288728,0,0,0.141775097242386,0.268675568108545,0.290633938513962,0.383382679165211,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.483437798366489,0.200506470303285,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0.509752546090077,0,0,0,0,0,0,0,0.309123034943167,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0.165284915360978,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0.490080431962063,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0.111443384277478,0,0.95497793895076,0,0,0,0.281338832821026,0,0,0.211125408127993,0,0.828851746593443,0.503865495708552,0,0,0,0,0.716084698702437,0,0,0,0,0,0,0,0,0.262379999988587,0,0.682760689712998,0,0.945550727071745,0,0,0,0.885741385813839,1.80894657938112,1.52581736317083,0,0.295547618953547,0.219385397153973,0,3.34616986268648,0.0769502585037971,0,0.46112780877612,0.448788222048861,0.434589487688032,0.31900115973192,0,0.533034776018635,0,0.156980256395025,0.166211681900156,0,0.19606253431774,0,0,0,0,0.163232808159148,0.565412285735763,0,1.99052386215701,4.33442066066362,1.22206028986725,0,0,0,0.067401132980677,0,1.1713222286267,0.182454789215666,0,0.242780379534093,0.394584402849391,2.41981432097328,0,0,0.901940516486955,0.207376382794494,0,0,0,0,0,0,0.347119476670262,0.881931576729399,0,0.52418000472609,0,0,0.146178634172371,0.246346371159628,0.484945082442097,0,0,0,0,0.0633107959558787,0.195551382734803,0.0801588202515337,1.28071796843612,0,0,0,0,0.288109595976299,0,1.41416420770077,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0.798716001995964,0,0,0.0671834724867263,0,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0,0.0846733320657845,0,0,0,0,0,0.449947783103001,2.32140586367385,0.121499113316049,3.01891218839339,0.551639951094387,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0.439656701034247,1.32506888912221,0.129282956361551,0.13223260174269,0.171086837884329,0,0,0.157204305099666,0,0,0,0.121792598380896,1.27668251554036,0,0,0,0,0,0.886068179966986,0.244052529803926,0.1251909307065,0.573409195690071,0.221858103073705,0.248385611765534,0,0,0,0,0.235265819698172,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0,0.308801447160972,0,0,0.192914038270915,0,0.512483037175893,0,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66995985250795,0,0,0.41023272848151,0,0,0.322951291263702,0,0.196295437002051,0,0.366857197043358,0.346576998451015,0,0,0,0,0,0.781514011233092,0.261906694481422,0,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0,0.548257766857182,0.496211178389294,0,0,0.535701835878287,0,0,0,0.443511850813194,0,0,0.0679697329768317,0,0,0.333694205676207,0.156986185701028,3.29942738823604,0.560544326627578,0.913158720509496,0.215927591218621,0,0.0714765441766563,0,0.116241425368125,0,0,0,0.17071847709395,0.691259661814092,0,0,0,0,0.4582137370881,0.31020638566432,0,0.782988022584546,0.883352102537187,5.12055284925532,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,7.71741581079447,1.31135736302374,0.470317296361523,0.245148321753905,0.23567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| ||
|short_description=p2@ACO2 | |||
}} | }} |
Latest revision as of 21:47, 24 September 2015
Short description: | p2@ACO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ACO2_5end |
Coexpression cluster: | NA |
Association with transcript: | 94bp_to_ENST00000471094_5end |
EntrezGene: | ACO2 |
HGNC: | 118 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corpus striatum | 1.96e-20 | 4 |
striatum | 1.96e-20 | 4 |
ventral part of telencephalon | 1.96e-20 | 4 |
future corpus striatum | 1.96e-20 | 4 |
caudate-putamen | 8.34e-13 | 3 |
dorsal striatum | 8.34e-13 | 3 |
intestine | 4.49e-12 | 17 |
telencephalic nucleus | 6.28e-12 | 7 |
putamen | 2.37e-10 | 1 |
nucleus accumbens | 4.44e-10 | 1 |
ventral striatum | 4.44e-10 | 1 |
tonsil | 1.17e-09 | 1 |
mucosa-associated lymphoid tissue | 1.17e-09 | 1 |
lymphoid tissue | 1.17e-09 | 1 |
tonsillar ring | 1.17e-09 | 1 |
basal ganglion | 2.16e-09 | 9 |
neural nucleus | 2.16e-09 | 9 |
nuclear complex of neuraxis | 2.16e-09 | 9 |
nucleus of brain | 2.16e-09 | 9 |
aggregate regional part of brain | 2.16e-09 | 9 |
collection of basal ganglia | 2.16e-09 | 9 |
cerebral subcortex | 2.16e-09 | 9 |
colon | 2.56e-09 | 9 |
gastrointestinal system | 2.62e-08 | 25 |
small intestine | 5.31e-08 | 4 |
large intestine | 1.04e-07 | 11 |
adult organism | 1.93e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 2.59e-10 | 1 |
keratoacanthoma | 2.59e-10 | 1 |