FFCP PHASE1:Hg19::chr2:27431534..27431545,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:27431534..27431545,- | |||
|coexpression_cluster_id=C839 | |coexpression_cluster_id=C839 | ||
|description=CAGE_peak_at_chr2:27431534..27431545,- | |description=CAGE_peak_at_chr2:27431534..27431545,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!1.14e-13!5;CL:0002586!1.02e-09!3;CL:0000149!2.38e-07!4;CL:0000147!7.40e-07!14 | |ontology_enrichment_celltype=CL:0002322!1.14e-13!5;CL:0002586!1.02e-09!3;CL:0000149!2.38e-07!4;CL:0000147!7.40e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0002586;8.96e-37;3!CL:0000149;9.00e-28;4!CL:0002322;2.41e-21;5!CL:0000147;4.07e-21;14!CL:0002577;2.38e-16;3!CL:0002321;1.68e-07;15 | |ontology_enrichment_celltype_v019=CL:0002586;8.96e-37;3!CL:0000149;9.00e-28;4!CL:0002322;2.41e-21;5!CL:0000147;4.07e-21;14!CL:0002577;2.38e-16;3!CL:0002321;1.68e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002586,8.98e-37,3;CL:0000149,9.01e-28,4;CL:0002322,3.68e-21,5;CL:0000147,4.61e-21,14;CL:0002577,2.04e-16,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!5.49e-16!86;UBERON:0000073!8.42e-14!94;UBERON:0001016!8.42e-14!94;UBERON:0002346!1.04e-12!90;UBERON:0002616!5.32e-12!59;UBERON:0001017!2.05e-11!82;UBERON:0001049!2.96e-11!57;UBERON:0005068!2.96e-11!57;UBERON:0006241!2.96e-11!57;UBERON:0007135!2.96e-11!57;UBERON:0003075!3.75e-11!86;UBERON:0007284!3.75e-11!86;UBERON:0000955!1.29e-10!69;UBERON:0006238!1.29e-10!69;UBERON:0007023!5.20e-10!115;UBERON:0000966!7.27e-10!5;UBERON:0005388!7.27e-10!5;UBERON:0001802!7.27e-10!5;UBERON:0001781!1.02e-09!3;UBERON:0001782!1.02e-09!3;UBERON:0005424!1.02e-09!3;UBERON:0003056!3.52e-09!61;UBERON:0001896!4.22e-09!3;UBERON:0005290!4.22e-09!3;UBERON:0010096!4.22e-09!3;UBERON:0000033!5.70e-09!123;UBERON:0000924!7.11e-09!173;UBERON:0006601!7.11e-09!173;UBERON:0002780!1.29e-08!41;UBERON:0001890!1.29e-08!41;UBERON:0006240!1.29e-08!41;UBERON:0003080!2.43e-08!42;UBERON:0000153!3.00e-08!129;UBERON:0007811!3.00e-08!129;UBERON:0001893!7.12e-08!34;UBERON:0004121!8.78e-08!169;UBERON:0002619!2.57e-07!22;UBERON:0001869!4.96e-07!32;UBERON:0001987!6.24e-07!4;UBERON:0004340!6.24e-07!4;UBERON:0002791!8.99e-07!33 | |ontology_enrichment_uberon=UBERON:0005743!5.49e-16!86;UBERON:0000073!8.42e-14!94;UBERON:0001016!8.42e-14!94;UBERON:0002346!1.04e-12!90;UBERON:0002616!5.32e-12!59;UBERON:0001017!2.05e-11!82;UBERON:0001049!2.96e-11!57;UBERON:0005068!2.96e-11!57;UBERON:0006241!2.96e-11!57;UBERON:0007135!2.96e-11!57;UBERON:0003075!3.75e-11!86;UBERON:0007284!3.75e-11!86;UBERON:0000955!1.29e-10!69;UBERON:0006238!1.29e-10!69;UBERON:0007023!5.20e-10!115;UBERON:0000966!7.27e-10!5;UBERON:0005388!7.27e-10!5;UBERON:0001802!7.27e-10!5;UBERON:0001781!1.02e-09!3;UBERON:0001782!1.02e-09!3;UBERON:0005424!1.02e-09!3;UBERON:0003056!3.52e-09!61;UBERON:0001896!4.22e-09!3;UBERON:0005290!4.22e-09!3;UBERON:0010096!4.22e-09!3;UBERON:0000033!5.70e-09!123;UBERON:0000924!7.11e-09!173;UBERON:0006601!7.11e-09!173;UBERON:0002780!1.29e-08!41;UBERON:0001890!1.29e-08!41;UBERON:0006240!1.29e-08!41;UBERON:0003080!2.43e-08!42;UBERON:0000153!3.00e-08!129;UBERON:0007811!3.00e-08!129;UBERON:0001893!7.12e-08!34;UBERON:0004121!8.78e-08!169;UBERON:0002619!2.57e-07!22;UBERON:0001869!4.96e-07!32;UBERON:0001987!6.24e-07!4;UBERON:0004340!6.24e-07!4;UBERON:0002791!8.99e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0000966;9.64e-39;5!UBERON:0005388;9.64e-39;5!UBERON:0001802;9.64e-39;5!UBERON:0001781;8.96e-37;3!UBERON:0001782;8.96e-37;3!UBERON:0000970;5.61e-15;20!UBERON:0002104;2.91e-14;21!UBERON:0000020;5.12e-13;23!UBERON:0001987;1.65e-12;4!UBERON:0001032;1.80e-12;24!UBERON:0004456;1.80e-12;24!UBERON:0007625;1.71e-10;11!UBERON:0000019;2.04e-10;19!UBERON:0000047;2.04e-10;19!UBERON:0004088;2.04e-10;19!UBERON:0010230;2.04e-10;19!UBERON:0001456;1.92e-09;21 | |ontology_enrichment_uberon_v019=UBERON:0000966;9.64e-39;5!UBERON:0005388;9.64e-39;5!UBERON:0001802;9.64e-39;5!UBERON:0001781;8.96e-37;3!UBERON:0001782;8.96e-37;3!UBERON:0000970;5.61e-15;20!UBERON:0002104;2.91e-14;21!UBERON:0000020;5.12e-13;23!UBERON:0001987;1.65e-12;4!UBERON:0001032;1.80e-12;24!UBERON:0004456;1.80e-12;24!UBERON:0007625;1.71e-10;11!UBERON:0000019;2.04e-10;19!UBERON:0000047;2.04e-10;19!UBERON:0004088;2.04e-10;19!UBERON:0010230;2.04e-10;19!UBERON:0001456;1.92e-09;21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,8.98e-37,3;UBERON:0005424,8.98e-37,3;UBERON:0000966,2.33e-32,6;UBERON:0005388,2.33e-32,6;UBERON:0001802,2.33e-32,6;UBERON:0001781,9.01e-28,4;UBERON:0000970,3.04e-14,21;UBERON:0002104,3.04e-14,21;UBERON:0001987,1.47e-12,4;UBERON:0004340,1.47e-12,4;UBERON:0000020,1.86e-12,24;UBERON:0001032,1.86e-12,24;UBERON:0004456,1.86e-12,24;UBERON:0007625,1.71e-10,11;UBERON:0000019,6.60e-10,20;UBERON:0000047,6.60e-10,20;UBERON:0010312,6.60e-10,20;UBERON:0004088,6.60e-10,20;UBERON:0010230,6.60e-10,20;UBERON:0003072,6.60e-10,20;UBERON:0004128,6.60e-10,20;UBERON:0003071,6.60e-10,20;UBERON:0001456,5.05e-09,22;UBERON:0004923,3.93e-08,66;UBERON:0003124,1.47e-07,7 | |||
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| ||
|short_description=p@chr2:27431534..27431545,- | |short_description=p@chr2:27431534..27431545,- | ||
}} | }} |
Latest revision as of 09:08, 29 July 2015
Short description: | p@chr2:27431534..27431545, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:27431534..27431545, - |
Coexpression cluster: | C839_Retinal_Mallassezderived_retina_medulla_mesothelioma_osteosarcoma_Saos2 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 8.98e-37 | 3 |
visual pigment cell | 9.01e-28 | 4 |
embryonic stem cell | 3.68e-21 | 5 |
pigment cell | 4.61e-21 | 14 |
placental epithelial cell | 2.04e-16 | 3 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 8.98e-37 | 3 |
presumptive retinal pigmented epithelium | 8.98e-37 | 3 |
retina | 2.33e-32 | 6 |
photoreceptor array | 2.33e-32 | 6 |
posterior segment of eyeball | 2.33e-32 | 6 |
layer of retina | 9.01e-28 | 4 |
eye | 3.04e-14 | 21 |
visual system | 3.04e-14 | 21 |
placenta | 1.47e-12 | 4 |
allantois | 1.47e-12 | 4 |
sense organ | 1.86e-12 | 24 |
sensory system | 1.86e-12 | 24 |
entire sense organ system | 1.86e-12 | 24 |
pigment epithelium of eye | 1.71e-10 | 11 |
camera-type eye | 6.60e-10 | 20 |
simple eye | 6.60e-10 | 20 |
immature eye | 6.60e-10 | 20 |
ocular region | 6.60e-10 | 20 |
eyeball of camera-type eye | 6.60e-10 | 20 |
optic cup | 6.60e-10 | 20 |
optic vesicle | 6.60e-10 | 20 |
eye primordium | 6.60e-10 | 20 |
face | 5.05e-09 | 22 |
organ component layer | 3.93e-08 | 66 |
chorion | 1.47e-07 | 7 |