FFCP PHASE1:Hg19::chr17:42983689..42983699,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2670 | |EntrezGene=2670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4235 | |HGNC=4235 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=171bp_to_U92979_5end | |association_with_transcript=171bp_to_U92979_5end | ||
|cluster_id=chr17:42983689..42983699,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_22_at_GFAP_5end | |description=CAGE_peak_22_at_GFAP_5end | ||
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|ontology_enrichment_celltype=CL:0002605!1.83e-12!3;CL:0000128!6.06e-09!7;CL:0000126!6.06e-09!7;CL:0000127!6.06e-09!7;CL:0002453!6.06e-09!7;CL:0002319!1.89e-07!25;CL:0000047!3.02e-07!8 | |ontology_enrichment_celltype=CL:0002605!1.83e-12!3;CL:0000128!6.06e-09!7;CL:0000126!6.06e-09!7;CL:0000127!6.06e-09!7;CL:0002453!6.06e-09!7;CL:0002319!1.89e-07!25;CL:0000047!3.02e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002605;1.33e-16;3!CL:0000128;2.24e-07;7!CL:0000126;2.24e-07;7!CL:0000127;2.24e-07;7 | |ontology_enrichment_celltype_v019=CL:0002605;1.33e-16;3!CL:0000128;2.24e-07;7!CL:0000126;2.24e-07;7!CL:0000127;2.24e-07;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.44e-16,3;CL:0000128,2.31e-07,7;CL:0000126,2.31e-07,7;CL:0000127,2.31e-07,7;CL:0002453,2.31e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.94e-17;3!UBERON:0003057;1.94e-17;3!UBERON:0006215;1.06e-15;3!UBERON:0006601;8.20e-15;82!UBERON:0010122;7.11e-11;2 | |ontology_enrichment_development_v019=UBERON:0006241;1.94e-17;3!UBERON:0003057;1.94e-17;3!UBERON:0006215;1.06e-15;3!UBERON:0006601;8.20e-15;82!UBERON:0010122;7.11e-11;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.13e-121!57;UBERON:0005068!1.13e-121!57;UBERON:0006241!1.13e-121!57;UBERON:0007135!1.13e-121!57;UBERON:0001017!3.15e-110!82;UBERON:0005743!9.61e-105!86;UBERON:0002616!2.27e-100!59;UBERON:0000073!4.68e-94!94;UBERON:0001016!4.68e-94!94;UBERON:0000955!5.13e-92!69;UBERON:0006238!5.13e-92!69;UBERON:0002780!2.19e-82!41;UBERON:0001890!2.19e-82!41;UBERON:0006240!2.19e-82!41;UBERON:0002020!5.86e-82!34;UBERON:0003528!5.86e-82!34;UBERON:0003075!1.16e-81!86;UBERON:0007284!1.16e-81!86;UBERON:0001893!3.29e-81!34;UBERON:0003080!2.77e-80!42;UBERON:0002791!4.27e-78!33;UBERON:0002346!1.26e-77!90;UBERON:0001869!3.87e-74!32;UBERON:0007023!2.59e-53!115;UBERON:0003056!3.28e-53!61;UBERON:0000956!9.13e-52!25;UBERON:0000203!9.13e-52!25;UBERON:0000033!1.19e-50!123;UBERON:0004121!1.92e-48!169;UBERON:0000153!7.20e-48!129;UBERON:0007811!7.20e-48!129;UBERON:0000924!4.22e-47!173;UBERON:0006601!4.22e-47!173;UBERON:0002619!1.05e-41!22;UBERON:0003076!4.45e-41!15;UBERON:0003057!4.45e-41!15;UBERON:0001950!2.87e-35!20;UBERON:0002308!2.51e-32!9;UBERON:0000125!2.51e-32!9;UBERON:0002420!6.56e-32!9;UBERON:0007245!6.56e-32!9;UBERON:0010009!6.56e-32!9;UBERON:0010011!6.56e-32!9;UBERON:0000454!6.56e-32!9;UBERON:0004733!4.83e-30!12;UBERON:0002028!4.83e-30!12;UBERON:0007277!4.83e-30!12;UBERON:0000025!4.34e-29!194;UBERON:0004732!1.43e-27!13;UBERON:0009663!5.25e-25!7;UBERON:0002298!1.53e-23!8;UBERON:0004111!1.83e-21!241;UBERON:0002680!1.81e-19!9;UBERON:0001895!1.81e-19!9;UBERON:0010092!1.81e-19!9;UBERON:0000349!1.26e-18!5;UBERON:0000477!1.21e-17!286;UBERON:0001871!2.32e-16!7;UBERON:0000483!1.56e-15!309;UBERON:0000064!2.21e-15!219;UBERON:0000119!2.76e-15!312;UBERON:0000200!4.67e-15!6;UBERON:0000369!1.62e-14!4;UBERON:0002435!1.62e-14!4;UBERON:0000204!1.62e-14!4;UBERON:0010082!1.62e-14!4;UBERON:0000475!2.95e-13!365;UBERON:0002240!4.19e-13!3;UBERON:0001896!6.69e-13!3;UBERON:0005290!6.69e-13!3;UBERON:0010096!6.69e-13!3;UBERON:0006331!8.45e-13!3;UBERON:0000988!3.48e-12!3;UBERON:0002771!5.47e-12!3;UBERON:0001872!8.98e-12!5;UBERON:0005383!1.60e-11!3;UBERON:0005382!1.60e-11!3;UBERON:0002037!6.00e-10!6;UBERON:0006215!6.00e-10!6;UBERON:0002148!4.71e-09!2;UBERON:0009662!4.71e-09!2;UBERON:0001897!8.10e-09!2;UBERON:0001954!9.81e-09!2;UBERON:0003022!9.81e-09!2;UBERON:0002421!9.81e-09!2;UBERON:0002600!9.81e-09!2;UBERON:0001876!1.28e-08!2;UBERON:0001875!1.67e-08!2;UBERON:0006514!1.67e-08!2;UBERON:0001873!2.01e-08!2;UBERON:0010122!2.01e-08!2;UBERON:0005174!5.23e-08!5;UBERON:0001137!5.23e-08!5;UBERON:0000062!1.26e-07!511;UBERON:0002021!5.00e-07!5;UBERON:0000922!8.24e-07!612 | |ontology_enrichment_uberon=UBERON:0001049!1.13e-121!57;UBERON:0005068!1.13e-121!57;UBERON:0006241!1.13e-121!57;UBERON:0007135!1.13e-121!57;UBERON:0001017!3.15e-110!82;UBERON:0005743!9.61e-105!86;UBERON:0002616!2.27e-100!59;UBERON:0000073!4.68e-94!94;UBERON:0001016!4.68e-94!94;UBERON:0000955!5.13e-92!69;UBERON:0006238!5.13e-92!69;UBERON:0002780!2.19e-82!41;UBERON:0001890!2.19e-82!41;UBERON:0006240!2.19e-82!41;UBERON:0002020!5.86e-82!34;UBERON:0003528!5.86e-82!34;UBERON:0003075!1.16e-81!86;UBERON:0007284!1.16e-81!86;UBERON:0001893!3.29e-81!34;UBERON:0003080!2.77e-80!42;UBERON:0002791!4.27e-78!33;UBERON:0002346!1.26e-77!90;UBERON:0001869!3.87e-74!32;UBERON:0007023!2.59e-53!115;UBERON:0003056!3.28e-53!61;UBERON:0000956!9.13e-52!25;UBERON:0000203!9.13e-52!25;UBERON:0000033!1.19e-50!123;UBERON:0004121!1.92e-48!169;UBERON:0000153!7.20e-48!129;UBERON:0007811!7.20e-48!129;UBERON:0000924!4.22e-47!173;UBERON:0006601!4.22e-47!173;UBERON:0002619!1.05e-41!22;UBERON:0003076!4.45e-41!15;UBERON:0003057!4.45e-41!15;UBERON:0001950!2.87e-35!20;UBERON:0002308!2.51e-32!9;UBERON:0000125!2.51e-32!9;UBERON:0002420!6.56e-32!9;UBERON:0007245!6.56e-32!9;UBERON:0010009!6.56e-32!9;UBERON:0010011!6.56e-32!9;UBERON:0000454!6.56e-32!9;UBERON:0004733!4.83e-30!12;UBERON:0002028!4.83e-30!12;UBERON:0007277!4.83e-30!12;UBERON:0000025!4.34e-29!194;UBERON:0004732!1.43e-27!13;UBERON:0009663!5.25e-25!7;UBERON:0002298!1.53e-23!8;UBERON:0004111!1.83e-21!241;UBERON:0002680!1.81e-19!9;UBERON:0001895!1.81e-19!9;UBERON:0010092!1.81e-19!9;UBERON:0000349!1.26e-18!5;UBERON:0000477!1.21e-17!286;UBERON:0001871!2.32e-16!7;UBERON:0000483!1.56e-15!309;UBERON:0000064!2.21e-15!219;UBERON:0000119!2.76e-15!312;UBERON:0000200!4.67e-15!6;UBERON:0000369!1.62e-14!4;UBERON:0002435!1.62e-14!4;UBERON:0000204!1.62e-14!4;UBERON:0010082!1.62e-14!4;UBERON:0000475!2.95e-13!365;UBERON:0002240!4.19e-13!3;UBERON:0001896!6.69e-13!3;UBERON:0005290!6.69e-13!3;UBERON:0010096!6.69e-13!3;UBERON:0006331!8.45e-13!3;UBERON:0000988!3.48e-12!3;UBERON:0002771!5.47e-12!3;UBERON:0001872!8.98e-12!5;UBERON:0005383!1.60e-11!3;UBERON:0005382!1.60e-11!3;UBERON:0002037!6.00e-10!6;UBERON:0006215!6.00e-10!6;UBERON:0002148!4.71e-09!2;UBERON:0009662!4.71e-09!2;UBERON:0001897!8.10e-09!2;UBERON:0001954!9.81e-09!2;UBERON:0003022!9.81e-09!2;UBERON:0002421!9.81e-09!2;UBERON:0002600!9.81e-09!2;UBERON:0001876!1.28e-08!2;UBERON:0001875!1.67e-08!2;UBERON:0006514!1.67e-08!2;UBERON:0001873!2.01e-08!2;UBERON:0010122!2.01e-08!2;UBERON:0005174!5.23e-08!5;UBERON:0001137!5.23e-08!5;UBERON:0000062!1.26e-07!511;UBERON:0002021!5.00e-07!5;UBERON:0000922!8.24e-07!612 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|short_description=p22@GFAP | |short_description=p22@GFAP | ||
}} | }} |
Latest revision as of 23:07, 24 September 2015
Short description: | p22@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 171bp_to_U92979_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.44e-16 | 3 |
oligodendrocyte | 2.31e-07 | 7 |
macroglial cell | 2.31e-07 | 7 |
astrocyte | 2.31e-07 | 7 |
oligodendrocyte precursor cell | 2.31e-07 | 7 |