FFCP PHASE1:Hg19::chr11:70508440..70508453,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22941 | |EntrezGene=22941 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14295 | |HGNC=14295 | ||
|TSSclassifier=strong | |||
|UniProt=B7ZKU9 | |UniProt=B7ZKU9 | ||
|association_with_transcript=-495bp_to_ENST00000449116_5end | |association_with_transcript=-495bp_to_ENST00000449116_5end | ||
|cluster_id=chr11:70508440..70508453,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_5_at_SHANK2_5end | |description=CAGE_peak_5_at_SHANK2_5end | ||
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|ontology_enrichment_celltype=CL:0000047!1.06e-09!8;CL:0000540!8.76e-07!6;CL:0000031!8.76e-07!6;CL:0000404!8.76e-07!6 | |ontology_enrichment_celltype=CL:0000047!1.06e-09!8;CL:0000540!8.76e-07!6;CL:0000031!8.76e-07!6;CL:0000404!8.76e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.27e-07;5 | |ontology_enrichment_celltype_v019=CL:0000333;1.27e-07;5 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.67e-20;82 | |ontology_enrichment_development_v019=UBERON:0006601;6.67e-20;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.90e-62!82;UBERON:0005743!2.09e-60!86;UBERON:0000073!1.01e-59!94;UBERON:0001016!1.01e-59!94;UBERON:0001049!4.79e-57!57;UBERON:0005068!4.79e-57!57;UBERON:0006241!4.79e-57!57;UBERON:0007135!4.79e-57!57;UBERON:0002780!1.29e-47!41;UBERON:0001890!1.29e-47!41;UBERON:0006240!1.29e-47!41;UBERON:0002616!3.68e-47!59;UBERON:0000955!2.41e-46!69;UBERON:0006238!2.41e-46!69;UBERON:0003080!3.23e-46!42;UBERON:0002020!7.84e-43!34;UBERON:0003528!7.84e-43!34;UBERON:0001893!8.46e-43!34;UBERON:0002791!4.62e-41!33;UBERON:0001869!2.72e-40!32;UBERON:0003075!8.58e-40!86;UBERON:0007284!8.58e-40!86;UBERON:0002619!2.14e-37!22;UBERON:0002346!2.57e-37!90;UBERON:0001950!3.49e-34!20;UBERON:0000956!3.57e-32!25;UBERON:0000203!3.57e-32!25;UBERON:0003056!6.11e-32!61;UBERON:0007023!1.56e-28!115;UBERON:0004121!5.01e-25!169;UBERON:0000924!5.01e-24!173;UBERON:0006601!5.01e-24!173;UBERON:0000033!4.41e-22!123;UBERON:0000153!2.50e-21!129;UBERON:0007811!2.50e-21!129;UBERON:0000025!1.01e-14!194;UBERON:0002420!3.13e-12!9;UBERON:0007245!3.13e-12!9;UBERON:0010009!3.13e-12!9;UBERON:0010011!3.13e-12!9;UBERON:0000454!3.13e-12!9;UBERON:0000200!4.26e-12!6;UBERON:0002308!6.16e-12!9;UBERON:0000125!6.16e-12!9;UBERON:0003076!7.86e-12!15;UBERON:0003057!7.86e-12!15;UBERON:0001871!1.10e-11!7;UBERON:0002021!1.92e-10!5;UBERON:0001872!2.98e-10!5;UBERON:0002298!4.25e-10!8;UBERON:0000349!6.17e-10!5;UBERON:0004111!6.55e-09!241;UBERON:0009663!6.64e-09!7;UBERON:0004733!3.51e-08!12;UBERON:0002028!3.51e-08!12;UBERON:0007277!3.51e-08!12;UBERON:0000483!5.88e-08!309;UBERON:0000119!9.93e-08!312;UBERON:0000475!1.86e-07!365;UBERON:0004732!1.99e-07!13;UBERON:0000064!2.40e-07!219;UBERON:0000477!5.35e-07!286;UBERON:0002771!5.94e-07!3 | |ontology_enrichment_uberon=UBERON:0001017!8.90e-62!82;UBERON:0005743!2.09e-60!86;UBERON:0000073!1.01e-59!94;UBERON:0001016!1.01e-59!94;UBERON:0001049!4.79e-57!57;UBERON:0005068!4.79e-57!57;UBERON:0006241!4.79e-57!57;UBERON:0007135!4.79e-57!57;UBERON:0002780!1.29e-47!41;UBERON:0001890!1.29e-47!41;UBERON:0006240!1.29e-47!41;UBERON:0002616!3.68e-47!59;UBERON:0000955!2.41e-46!69;UBERON:0006238!2.41e-46!69;UBERON:0003080!3.23e-46!42;UBERON:0002020!7.84e-43!34;UBERON:0003528!7.84e-43!34;UBERON:0001893!8.46e-43!34;UBERON:0002791!4.62e-41!33;UBERON:0001869!2.72e-40!32;UBERON:0003075!8.58e-40!86;UBERON:0007284!8.58e-40!86;UBERON:0002619!2.14e-37!22;UBERON:0002346!2.57e-37!90;UBERON:0001950!3.49e-34!20;UBERON:0000956!3.57e-32!25;UBERON:0000203!3.57e-32!25;UBERON:0003056!6.11e-32!61;UBERON:0007023!1.56e-28!115;UBERON:0004121!5.01e-25!169;UBERON:0000924!5.01e-24!173;UBERON:0006601!5.01e-24!173;UBERON:0000033!4.41e-22!123;UBERON:0000153!2.50e-21!129;UBERON:0007811!2.50e-21!129;UBERON:0000025!1.01e-14!194;UBERON:0002420!3.13e-12!9;UBERON:0007245!3.13e-12!9;UBERON:0010009!3.13e-12!9;UBERON:0010011!3.13e-12!9;UBERON:0000454!3.13e-12!9;UBERON:0000200!4.26e-12!6;UBERON:0002308!6.16e-12!9;UBERON:0000125!6.16e-12!9;UBERON:0003076!7.86e-12!15;UBERON:0003057!7.86e-12!15;UBERON:0001871!1.10e-11!7;UBERON:0002021!1.92e-10!5;UBERON:0001872!2.98e-10!5;UBERON:0002298!4.25e-10!8;UBERON:0000349!6.17e-10!5;UBERON:0004111!6.55e-09!241;UBERON:0009663!6.64e-09!7;UBERON:0004733!3.51e-08!12;UBERON:0002028!3.51e-08!12;UBERON:0007277!3.51e-08!12;UBERON:0000483!5.88e-08!309;UBERON:0000119!9.93e-08!312;UBERON:0000475!1.86e-07!365;UBERON:0004732!1.99e-07!13;UBERON:0000064!2.40e-07!219;UBERON:0000477!5.35e-07!286;UBERON:0002771!5.94e-07!3 | ||
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|short_description=p5@SHANK2 | |short_description=p5@SHANK2 | ||
}} | }} |
Latest revision as of 23:17, 19 September 2015
Short description: | p5@SHANK2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SHANK2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -495bp_to_ENST00000449116_5end |
EntrezGene: | SHANK2 |
HGNC: | 14295 |
UniProt: | B7ZKU9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data