FFCP PHASE1:Hg19::chr21:40984704..40984729,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr21:40984704..40984729,-
|short_description=p2@C21orf88
|description=CAGE_peak_2_at_C21orf88_5end
|association_with_transcript=18bp_to_ENST00000329618_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16424 | |HGNC=16424 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_ENST00000329618_5end | |||
|cluster_id=chr21:40984704..40984729,- | |||
|description=CAGE_peak_2_at_C21orf88_5end | |||
|id=chr21:40984704..40984729,- | |||
|ontology_enrichment_celltype=CL:0002322!5.54e-10!5;CL:0002319!2.27e-07!25;CL:0000133!9.72e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.74e-31;5!CL:0000064;3.98e-19;3!CL:0000067;3.98e-19;3!CL:0005012;3.98e-19;3!CL:0002304;3.98e-19;3!CL:0000075;6.21e-17;27!CL:1000507;4.80e-15;10!CL:1000494;4.80e-15;10!CL:0002321;1.63e-14;15!CL:0000650;3.17e-13;2!CL:1000500;3.17e-13;2!CL:1000618;3.17e-13;2!CL:1001318;3.17e-13;2!CL:0002173;3.17e-13;2!CL:0000710;1.25e-10;20!CL:1000449;5.79e-10;15!CL:1000497;9.15e-09;17!CL:0002518;9.15e-09;17!CL:0000228;2.82e-07;1!CL:0002372;2.82e-07;1!CL:0000147;3.41e-07;14!CL:0000669;4.91e-07;4!CL:0000306;7.26e-07;4!CL:0002222;7.26e-07;4!CL:0002224;7.26e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.62e-31,5;CL:0000064,3.32e-19,3;CL:0000067,3.32e-19,3;CL:0005012,3.32e-19,3;CL:0002304,3.32e-19,3;CL:0000075,5.88e-17,27;CL:1000507,4.40e-15,10;CL:1000494,4.40e-15,10;CL:0000650,2.34e-13,2;CL:1000500,2.34e-13,2;CL:1000618,2.34e-13,2;CL:1001318,2.34e-13,2;CL:0002173,2.34e-13,2;CL:0000710,1.30e-10,20;CL:1000449,5.47e-10,15;CL:1000497,8.72e-09,17;CL:0002518,8.72e-09,17;CL:0000228,3.20e-07,1;CL:0002372,3.20e-07,1;CL:0000147,3.41e-07,14;CL:0000669,4.22e-07,4;CL:0000306,6.26e-07,4;CL:0002222,6.26e-07,4;CL:0002224,6.26e-07,4;CL:0000133,9.53e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006222;2.82e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.34e-19!94;UBERON:0001016!7.34e-19!94;UBERON:0005743!3.76e-18!86;UBERON:0001017!5.13e-17!82;UBERON:0003075!9.48e-17!86;UBERON:0007284!9.48e-17!86;UBERON:0002346!1.54e-16!90;UBERON:0007023!1.66e-15!115;UBERON:0000924!3.32e-14!173;UBERON:0006601!3.32e-14!173;UBERON:0004121!3.71e-14!169;UBERON:0003056!4.21e-14!61;UBERON:0001049!2.37e-13!57;UBERON:0005068!2.37e-13!57;UBERON:0006241!2.37e-13!57;UBERON:0007135!2.37e-13!57;UBERON:0000153!1.10e-12!129;UBERON:0007811!1.10e-12!129;UBERON:0002616!1.29e-12!59;UBERON:0000955!2.91e-12!69;UBERON:0006238!2.91e-12!69;UBERON:0000033!3.41e-12!123;UBERON:0002780!7.58e-10!41;UBERON:0001890!7.58e-10!41;UBERON:0006240!7.58e-10!41;UBERON:0003080!1.71e-09!42;UBERON:0002791!6.52e-09!33;UBERON:0002420!7.63e-09!9;UBERON:0007245!7.63e-09!9;UBERON:0010009!7.63e-09!9;UBERON:0010011!7.63e-09!9;UBERON:0000454!7.63e-09!9;UBERON:0009663!8.64e-09!7;UBERON:0002020!1.41e-08!34;UBERON:0003528!1.41e-08!34;UBERON:0001893!1.56e-08!34;UBERON:0002308!1.61e-08!9;UBERON:0000125!1.61e-08!9;UBERON:0000475!2.24e-08!365;UBERON:0000488!9.48e-08!4;UBERON:0000468!1.07e-07!659;UBERON:0007625!2.08e-07!11;UBERON:0001869!3.82e-07!32;UBERON:0000020!4.88e-07!23;UBERON:0000064!5.11e-07!219;UBERON:0000970!5.67e-07!20;UBERON:0000058!6.74e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;2.62e-19;11!UBERON:0001778;3.98e-19;3!UBERON:0001775;3.98e-19;3!UBERON:0004211;4.80e-15;10!UBERON:0009773;4.80e-15;10!UBERON:0001231;4.80e-15;10!UBERON:0004810;4.80e-15;10!UBERON:0000488;1.73e-14;4!UBERON:0000970;5.99e-14;20!UBERON:0002104;3.03e-13;21!UBERON:0003567;3.17e-13;2!UBERON:0003838;3.17e-13;2!UBERON:0003586;3.17e-13;2!UBERON:0005169;3.17e-13;2!UBERON:0002321;3.17e-13;2!UBERON:0005215;3.17e-13;2!UBERON:0002303;3.17e-13;2!UBERON:0002319;3.17e-13;2!UBERON:0000020;5.09e-12;23!UBERON:0001032;1.75e-11;24!UBERON:0004456;1.75e-11;24!UBERON:0000019;5.80e-11;19!UBERON:0000047;5.80e-11;19!UBERON:0004088;5.80e-11;19!UBERON:0010230;5.80e-11;19!UBERON:0001801;1.08e-10;14!UBERON:0006555;5.79e-10;15!UBERON:0004819;5.79e-10;15!UBERON:0001285;5.79e-10;15!UBERON:0007684;5.79e-10;15!UBERON:0001456;7.23e-10;21!UBERON:0002203;7.95e-10;6!UBERON:0001768;7.95e-10;6!UBERON:0002200;7.95e-10;6!UBERON:0005383;1.89e-09;3!UBERON:0005382;1.89e-09;3!UBERON:0001874;1.25e-07;1!UBERON:0000369;2.74e-07;4!UBERON:0002435;2.74e-07;4!UBERON:0000204;2.74e-07;4!UBERON:0003891;4.91e-07;4!UBERON:0010077;7.26e-07;4!UBERON:0005389;7.26e-07;4!UBERON:0000484;7.26e-07;4!UBERON:0000965;7.26e-07;4!UBERON:0001803;7.26e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.72e-19,11;UBERON:0001778,3.32e-19,3;UBERON:0001775,3.32e-19,3;UBERON:0004810,4.40e-15,10;UBERON:0000488,1.51e-14,4;UBERON:0000970,2.27e-13,21;UBERON:0002104,2.27e-13,21;UBERON:0003567,2.34e-13,2;UBERON:0003838,2.34e-13,2;UBERON:0003586,2.34e-13,2;UBERON:0005169,2.34e-13,2;UBERON:0002321,2.34e-13,2;UBERON:0005215,2.34e-13,2;UBERON:0002303,2.34e-13,2;UBERON:0002319,2.34e-13,2;UBERON:0000020,1.36e-11,24;UBERON:0001032,1.36e-11,24;UBERON:0004456,1.36e-11,24;UBERON:0001801,9.20e-11,14;UBERON:0000019,1.75e-10,20;UBERON:0000047,1.75e-10,20;UBERON:0010312,1.75e-10,20;UBERON:0004088,1.75e-10,20;UBERON:0010230,1.75e-10,20;UBERON:0003072,1.75e-10,20;UBERON:0004128,1.75e-10,20;UBERON:0003071,1.75e-10,20;UBERON:0004211,5.47e-10,15;UBERON:0009773,5.47e-10,15;UBERON:0001231,5.47e-10,15;UBERON:0001285,5.47e-10,15;UBERON:0007684,5.47e-10,15;UBERON:0004208,5.47e-10,15;UBERON:0002203,7.27e-10,6;UBERON:0001768,7.27e-10,6;UBERON:0002200,7.27e-10,6;UBERON:0001456,1.76e-09,22;UBERON:0005383,1.90e-09,3;UBERON:0005382,1.90e-09,3;UBERON:0006555,2.38e-09,16;UBERON:0004819,2.38e-09,16;UBERON:0003056,4.31e-08,61;UBERON:0001874,1.42e-07,1;UBERON:0000369,2.75e-07,4;UBERON:0002435,2.75e-07,4;UBERON:0000204,2.75e-07,4;UBERON:0010082,2.75e-07,4;UBERON:0003891,4.22e-07,4;UBERON:0010077,6.26e-07,4;UBERON:0005389,6.26e-07,4;UBERON:0000484,6.26e-07,4;UBERON:0002546,6.26e-07,4;UBERON:0000965,6.26e-07,4;UBERON:0001803,6.26e-07,4;UBERON:0003073,6.26e-07,4;UBERON:0005426,6.26e-07,4 | |||
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| ||
|short_description=p2@C21orf88 | |||
}} | }} |
Latest revision as of 11:38, 18 September 2015
Short description: | p2@C21orf88 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C21orf88_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_ENST00000329618_5end |
EntrezGene: | NA |
HGNC: | 16424 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.62e-31 | 5 |
ciliated cell | 3.32e-19 | 3 |
ciliated epithelial cell | 3.32e-19 | 3 |
multi-ciliated epithelial cell | 3.32e-19 | 3 |
non-pigmented ciliary epithelial cell | 3.32e-19 | 3 |
columnar/cuboidal epithelial cell | 5.88e-17 | 27 |
kidney tubule cell | 4.40e-15 | 10 |
nephron tubule epithelial cell | 4.40e-15 | 10 |
mesangial cell | 2.34e-13 | 2 |
kidney interstitial cell | 2.34e-13 | 2 |
juxtaglomerular complex cell | 2.34e-13 | 2 |
renal interstitial pericyte | 2.34e-13 | 2 |
extraglomerular mesangial cell | 2.34e-13 | 2 |
neurecto-epithelial cell | 1.30e-10 | 20 |
epithelial cell of nephron | 5.47e-10 | 15 |
kidney cell | 8.72e-09 | 17 |
kidney epithelial cell | 8.72e-09 | 17 |
multinucleate cell | 3.20e-07 | 1 |
myotube | 3.20e-07 | 1 |
pigment cell | 3.41e-07 | 14 |
pericyte cell | 4.22e-07 | 4 |
crystallin accumulating cell | 6.26e-07 | 4 |
vertebrate lens cell | 6.26e-07 | 4 |
lens epithelial cell | 6.26e-07 | 4 |
neurectodermal cell | 9.53e-07 | 59 |