FFCP PHASE1:Hg19::chr6:122931366..122931383,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5570 | |EntrezGene=5570 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9018 | |HGNC=9018 | ||
|TSSclassifier=strong | |||
|UniProt=Q9C010 | |UniProt=Q9C010 | ||
|association_with_transcript=0bp_to_ENST00000368448,ENST00000368452,ENST00000392490,NM_032471,NM_181795,uc003pza.2,uc003pzb.2_5end | |association_with_transcript=0bp_to_ENST00000368448,ENST00000368452,ENST00000392490,NM_032471,NM_181795,uc003pza.2,uc003pzb.2_5end | ||
|cluster_id=chr6:122931366..122931383,+ | |||
|coexpression_cluster_id=C4457 | |coexpression_cluster_id=C4457 | ||
|description=CAGE_peak_5_at_PKIB_5end | |description=CAGE_peak_5_at_PKIB_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000453!3.87e-10!5;CL:0000990!1.32e-09!8;CL:0000451!1.34e-07!10 | |ontology_enrichment_celltype=CL:0000453!3.87e-10!5;CL:0000990!1.32e-09!8;CL:0000451!1.34e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000453;2.68e-27;5!CL:0001014;1.89e-18;2!CL:0001016;1.89e-18;2!CL:0000990;2.76e-15;8!CL:0000451;1.52e-12;10 | |ontology_enrichment_celltype_v019=CL:0000453;2.68e-27;5!CL:0001014;1.89e-18;2!CL:0001016;1.89e-18;2!CL:0000990;2.76e-15;8!CL:0000451;1.52e-12;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000453,3.76e-27,5;CL:0001014,1.89e-18,2;CL:0001016,1.89e-18,2;CL:0000990,3.32e-15,8;CL:0000451,1.77e-12,10 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.74e-10;1!UBERON:0001045;1.91e-09;1 | |ontology_enrichment_development_v019=UBERON:0003124;3.74e-10;1!UBERON:0001045;1.91e-09;1 | ||
|ontology_enrichment_disease=DOID:0050687!1.59e-08!143 | |ontology_enrichment_disease=DOID:0050687!1.59e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:5093;2.29e-19;4!DOID:1612;2.29e-19;4 | |ontology_enrichment_disease_v019=DOID:5093;2.29e-19;4!DOID:1612;2.29e-19;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,2.29e-19,4;DOID:1612,2.29e-19,4 | |||
|ontology_enrichment_uberon=UBERON:0002294!4.28e-08!7;UBERON:0001173!4.28e-08!7;UBERON:0004912!4.28e-08!7;UBERON:0000160!6.75e-07!27;UBERON:0002394!9.62e-07!4;UBERON:0003928!9.62e-07!4 | |ontology_enrichment_uberon=UBERON:0002294!4.28e-08!7;UBERON:0001173!4.28e-08!7;UBERON:0004912!4.28e-08!7;UBERON:0000160!6.75e-07!27;UBERON:0002394!9.62e-07!4;UBERON:0003928!9.62e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;1.91e-09;1!UBERON:0001153;1.91e-09;1!UBERON:0009854;1.91e-09;1!UBERON:0003296;4.78e-09;4!UBERON:0010133;4.78e-09;4!UBERON:0001155;6.96e-09;9!UBERON:0000310;4.54e-08;10!UBERON:0000160;1.25e-07;17!UBERON:0001443;2.23e-07;11!UBERON:0000059;2.36e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0001154;1.91e-09;1!UBERON:0001153;1.91e-09;1!UBERON:0009854;1.91e-09;1!UBERON:0003296;4.78e-09;4!UBERON:0010133;4.78e-09;4!UBERON:0001155;6.96e-09;9!UBERON:0000310;4.54e-08;10!UBERON:0000160;1.25e-07;17!UBERON:0001443;2.23e-07;11!UBERON:0000059;2.36e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,2.08e-09,1;UBERON:0001153,2.08e-09,1;UBERON:0001045,2.08e-09,1;UBERON:0003296,6.11e-09,4;UBERON:0010133,6.11e-09,4;UBERON:0001155,6.68e-09,9;UBERON:0000310,4.54e-08,10;UBERON:0000160,1.23e-07,17;UBERON:0001443,2.23e-07,11;UBERON:0000059,2.28e-07,11 | |||
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| ||
|short_description=p5@PKIB | |short_description=p5@PKIB | ||
}} | }} |
Latest revision as of 05:01, 20 September 2015
Short description: | p5@PKIB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PKIB_5end |
Coexpression cluster: | C4457_placenta_immature_Mast_breast_colon_small_migratory |
Association with transcript: | 0bp_to_ENST00000368448, ENST00000368452, ENST00000392490, NM_032471, NM_181795, uc003pza.2, uc003pzb.2_5end |
EntrezGene: | PKIB |
HGNC: | 9018 |
UniProt: | Q9C010 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 3.76e-27 | 5 |
CD1a-positive Langerhans cell | 1.89e-18 | 2 |
immature CD1a-positive Langerhans cell | 1.89e-18 | 2 |
conventional dendritic cell | 3.32e-15 | 8 |
dendritic cell | 1.77e-12 | 10 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 2.08e-09 | 1 |
caecum | 2.08e-09 | 1 |
midgut | 2.08e-09 | 1 |
gland of diencephalon | 6.11e-09 | 4 |
neuroendocrine gland | 6.11e-09 | 4 |
colon | 6.68e-09 | 9 |
breast | 4.54e-08 | 10 |
intestine | 1.23e-07 | 17 |
chest | 2.23e-07 | 11 |
large intestine | 2.28e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.29e-19 | 4 |
breast cancer | 2.29e-19 | 4 |