FFCP PHASE1:Hg19::chr11:2193037..2193053,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7054 | |EntrezGene=7054 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11782 | |HGNC=11782 | ||
|TSSclassifier=strong | |||
|UniProt=F8W8M5,E7EQI0,P07101,P78428 | |UniProt=F8W8M5,E7EQI0,P07101,P78428 | ||
|association_with_transcript=-2bp_to_ENST00000324155,ENST00000381168,ENST00000381175,ENST00000381178,NM_000360,NM_199292,NM_199293,uc001lvp.2,uc001lvq.2,uc001lvr.2,uc001lvs.2,uc001lvt.2,uc010qxj.1_5end | |association_with_transcript=-2bp_to_ENST00000324155,ENST00000381168,ENST00000381175,ENST00000381178,NM_000360,NM_199292,NM_199293,uc001lvp.2,uc001lvq.2,uc001lvr.2,uc001lvs.2,uc001lvt.2,uc010qxj.1_5end | ||
|cluster_id=chr11:2193037..2193053,- | |||
|coexpression_cluster_id=C323 | |coexpression_cluster_id=C323 | ||
|description=CAGE_peak_1_at_TH_5end | |description=CAGE_peak_1_at_TH_5end | ||
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|ontology_enrichment_celltype=CL:0000349!2.33e-07!3;CL:0002577!2.33e-07!3 | |ontology_enrichment_celltype=CL:0000349!2.33e-07!3;CL:0002577!2.33e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002577;3.55e-14;3!CL:0000349;2.32e-10;19!CL:0002536;3.83e-10;2!CL:0000047;1.34e-09;2!CL:0000333;2.55e-08;5!CL:0002321;7.87e-07;15!CL:0000346;8.24e-07;3!CL:1000428;8.24e-07;3 | |ontology_enrichment_celltype_v019=CL:0002577;3.55e-14;3!CL:0000349;2.32e-10;19!CL:0002536;3.83e-10;2!CL:0000047;1.34e-09;2!CL:0000333;2.55e-08;5!CL:0002321;7.87e-07;15!CL:0000346;8.24e-07;3!CL:1000428;8.24e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002577,3.55e-14,3;CL:0000349,2.39e-10,19;CL:0002536,3.83e-10,2;CL:0000133,2.26e-07,59;CL:0000346,8.36e-07,3;CL:1000428,8.36e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.05e-09;2!UBERON:0006601;4.99e-08;82 | |ontology_enrichment_development_v019=UBERON:0010122;2.05e-09;2!UBERON:0006601;4.99e-08;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;5.39e-07;6 | |ontology_enrichment_disease_v019=DOID:169;5.39e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:169,5.73e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!8.12e-32!94;UBERON:0001016!8.12e-32!94;UBERON:0001049!2.37e-30!57;UBERON:0005068!2.37e-30!57;UBERON:0006241!2.37e-30!57;UBERON:0007135!2.37e-30!57;UBERON:0001017!1.74e-29!82;UBERON:0005743!4.43e-29!86;UBERON:0002616!1.74e-25!59;UBERON:0000955!2.16e-24!69;UBERON:0006238!2.16e-24!69;UBERON:0002780!1.54e-23!41;UBERON:0001890!1.54e-23!41;UBERON:0006240!1.54e-23!41;UBERON:0004121!4.69e-23!169;UBERON:0003080!8.43e-23!42;UBERON:0000924!3.89e-22!173;UBERON:0006601!3.89e-22!173;UBERON:0003075!9.04e-22!86;UBERON:0007284!9.04e-22!86;UBERON:0007023!1.73e-20!115;UBERON:0002346!2.70e-20!90;UBERON:0003056!2.49e-17!61;UBERON:0002020!7.12e-17!34;UBERON:0003528!7.12e-17!34;UBERON:0001893!1.03e-16!34;UBERON:0002308!2.58e-16!9;UBERON:0000125!2.58e-16!9;UBERON:0002791!1.33e-15!33;UBERON:0000153!1.09e-14!129;UBERON:0007811!1.09e-14!129;UBERON:0000033!3.10e-14!123;UBERON:0001869!4.25e-14!32;UBERON:0009663!7.22e-13!7;UBERON:0002420!1.32e-12!9;UBERON:0007245!1.32e-12!9;UBERON:0010009!1.32e-12!9;UBERON:0010011!1.32e-12!9;UBERON:0000454!1.32e-12!9;UBERON:0000064!1.69e-12!219;UBERON:0002298!5.26e-12!8;UBERON:0005631!1.83e-10!14;UBERON:0000158!1.83e-10!14;UBERON:0001894!4.39e-09!7;UBERON:0006222!4.39e-09!7;UBERON:0001987!7.47e-09!4;UBERON:0004340!7.47e-09!4;UBERON:0000369!1.12e-08!4;UBERON:0002435!1.12e-08!4;UBERON:0000204!1.12e-08!4;UBERON:0010082!1.12e-08!4;UBERON:0003076!1.20e-08!15;UBERON:0003057!1.20e-08!15;UBERON:0004732!1.21e-08!13;UBERON:0000922!1.53e-07!612;UBERON:0003124!2.84e-07!7;UBERON:0004733!3.57e-07!12;UBERON:0002028!3.57e-07!12;UBERON:0007277!3.57e-07!12;UBERON:0001896!4.95e-07!3;UBERON:0005290!4.95e-07!3;UBERON:0010096!4.95e-07!3;UBERON:0005383!6.12e-07!3;UBERON:0005382!6.12e-07!3;UBERON:0000988!7.57e-07!3;UBERON:0006331!8.17e-07!3 | |ontology_enrichment_uberon=UBERON:0000073!8.12e-32!94;UBERON:0001016!8.12e-32!94;UBERON:0001049!2.37e-30!57;UBERON:0005068!2.37e-30!57;UBERON:0006241!2.37e-30!57;UBERON:0007135!2.37e-30!57;UBERON:0001017!1.74e-29!82;UBERON:0005743!4.43e-29!86;UBERON:0002616!1.74e-25!59;UBERON:0000955!2.16e-24!69;UBERON:0006238!2.16e-24!69;UBERON:0002780!1.54e-23!41;UBERON:0001890!1.54e-23!41;UBERON:0006240!1.54e-23!41;UBERON:0004121!4.69e-23!169;UBERON:0003080!8.43e-23!42;UBERON:0000924!3.89e-22!173;UBERON:0006601!3.89e-22!173;UBERON:0003075!9.04e-22!86;UBERON:0007284!9.04e-22!86;UBERON:0007023!1.73e-20!115;UBERON:0002346!2.70e-20!90;UBERON:0003056!2.49e-17!61;UBERON:0002020!7.12e-17!34;UBERON:0003528!7.12e-17!34;UBERON:0001893!1.03e-16!34;UBERON:0002308!2.58e-16!9;UBERON:0000125!2.58e-16!9;UBERON:0002791!1.33e-15!33;UBERON:0000153!1.09e-14!129;UBERON:0007811!1.09e-14!129;UBERON:0000033!3.10e-14!123;UBERON:0001869!4.25e-14!32;UBERON:0009663!7.22e-13!7;UBERON:0002420!1.32e-12!9;UBERON:0007245!1.32e-12!9;UBERON:0010009!1.32e-12!9;UBERON:0010011!1.32e-12!9;UBERON:0000454!1.32e-12!9;UBERON:0000064!1.69e-12!219;UBERON:0002298!5.26e-12!8;UBERON:0005631!1.83e-10!14;UBERON:0000158!1.83e-10!14;UBERON:0001894!4.39e-09!7;UBERON:0006222!4.39e-09!7;UBERON:0001987!7.47e-09!4;UBERON:0004340!7.47e-09!4;UBERON:0000369!1.12e-08!4;UBERON:0002435!1.12e-08!4;UBERON:0000204!1.12e-08!4;UBERON:0010082!1.12e-08!4;UBERON:0003076!1.20e-08!15;UBERON:0003057!1.20e-08!15;UBERON:0004732!1.21e-08!13;UBERON:0000922!1.53e-07!612;UBERON:0003124!2.84e-07!7;UBERON:0004733!3.57e-07!12;UBERON:0002028!3.57e-07!12;UBERON:0007277!3.57e-07!12;UBERON:0001896!4.95e-07!3;UBERON:0005290!4.95e-07!3;UBERON:0010096!4.95e-07!3;UBERON:0005383!6.12e-07!3;UBERON:0005382!6.12e-07!3;UBERON:0000988!7.57e-07!3;UBERON:0006331!8.17e-07!3 | ||
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|short_description=p1@TH | |short_description=p1@TH | ||
}} | }} |
Latest revision as of 09:06, 17 September 2015
Short description: | p1@TH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TH_5end |
Coexpression cluster: | C323_Placental_Amniotic_neuroblastoma_amniotic_chorionic_hairy_locus |
Association with transcript: | -2bp_to_ENST00000324155, ENST00000381168, ENST00000381175, ENST00000381178, NM_000360, NM_199292, NM_199293, uc001lvp.2, uc001lvq.2, uc001lvr.2, uc001lvs.2, uc001lvt.2, uc010qxj.1_5end |
EntrezGene: | TH |
HGNC: | 11782 |
UniProt: | F8W8M5E7EQI0P07101P78428 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 3.55e-14 | 3 |
extraembryonic cell | 2.39e-10 | 19 |
amniotic epithelial cell | 3.83e-10 | 2 |
neurectodermal cell | 2.26e-07 | 59 |
hair follicle dermal papilla cell | 8.36e-07 | 3 |
stem cell of epidermis | 8.36e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 5.73e-07 | 6 |