FFCP PHASE1:Hg19::chr12:53345928..53345949,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3875 | |EntrezGene=3875 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6430 | |HGNC=6430 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=402bp_to_ENST00000548496_5end | |association_with_transcript=402bp_to_ENST00000548496_5end | ||
|cluster_id=chr12:53345928..53345949,+ | |||
|coexpression_cluster_id=C819 | |coexpression_cluster_id=C819 | ||
|description=CAGE_peak_3_at_KRT18_5end | |description=CAGE_peak_3_at_KRT18_5end | ||
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|ontology_enrichment_celltype=CL:0000066!4.33e-43!254;CL:0000077!1.15e-12!19;CL:0000223!2.15e-10!59;CL:0002321!4.82e-10!248;CL:0000220!1.03e-09!246;CL:0000076!2.17e-08!62;CL:0002076!3.15e-08!43 | |ontology_enrichment_celltype=CL:0000066!4.33e-43!254;CL:0000077!1.15e-12!19;CL:0000223!2.15e-10!59;CL:0002321!4.82e-10!248;CL:0000220!1.03e-09!246;CL:0000076!2.17e-08!62;CL:0002076!3.15e-08!43 | ||
|ontology_enrichment_celltype_v019=CL:0000077;1.21e-19;19!CL:0000349;3.65e-09;19!CL:1000449;4.25e-08;15!CL:0000039;1.00e-07;7!CL:0000586;1.00e-07;7!CL:1000507;1.58e-07;10!CL:1000494;1.58e-07;10!CL:1000497;8.66e-07;17!CL:0002518;8.66e-07;17 | |ontology_enrichment_celltype_v019=CL:0000077;1.21e-19;19!CL:0000349;3.65e-09;19!CL:1000449;4.25e-08;15!CL:0000039;1.00e-07;7!CL:0000586;1.00e-07;7!CL:1000507;1.58e-07;10!CL:1000494;1.58e-07;10!CL:1000497;8.66e-07;17!CL:0002518;8.66e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.51e-36,253;CL:0000077,1.63e-19,19;CL:0000223,3.53e-09,58;CL:0000349,4.46e-09,19;CL:0002321,7.54e-09,250;CL:1000449,6.16e-08,15;CL:0000039,1.57e-07,7;CL:0000586,1.57e-07,7;CL:1000507,2.06e-07,10;CL:1000494,2.06e-07,10;CL:0000213,2.83e-07,58;CL:0000215,2.83e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.96e-07;29 | |ontology_enrichment_development_v019=UBERON:0008947;1.96e-07;29 | ||
|ontology_enrichment_disease=DOID:305!2.58e-25!106;DOID:0050687!5.95e-21!143;DOID:162!4.97e-14!235;DOID:14566!1.77e-13!239;DOID:299!2.62e-08!25 | |ontology_enrichment_disease=DOID:305!2.58e-25!106;DOID:0050687!5.95e-21!143;DOID:162!4.97e-14!235;DOID:14566!1.77e-13!239;DOID:299!2.62e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:299;5.29e-10;25!DOID:305;3.61e-07;106 | |ontology_enrichment_disease_v019=DOID:299;5.29e-10;25!DOID:305;3.61e-07;106 | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.46e-19,106;DOID:0050687,8.71e-16,143;DOID:299,3.50e-10,25;DOID:162,3.28e-09,235;DOID:14566,3.90e-09,239 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002423;1.29e-11;25!UBERON:0001737;3.74e-10;9!UBERON:0001557;3.74e-10;9!UBERON:0005631;1.37e-08;10!UBERON:0000158;1.37e-08;10!UBERON:0005172;2.54e-08;52!UBERON:0005173;2.54e-08;52!UBERON:0006555;4.25e-08;15!UBERON:0004819;4.25e-08;15!UBERON:0001285;4.25e-08;15!UBERON:0007684;4.25e-08;15!UBERON:0002107;1.11e-07;19!UBERON:0006925;1.11e-07;19!UBERON:0004211;1.58e-07;10!UBERON:0009773;1.58e-07;10!UBERON:0001231;1.58e-07;10!UBERON:0004810;1.58e-07;10!UBERON:0000478;2.15e-07;24!UBERON:0002417;6.52e-07;58!UBERON:0000916;6.52e-07;58!UBERON:0001851;7.45e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0002423;1.29e-11;25!UBERON:0001737;3.74e-10;9!UBERON:0001557;3.74e-10;9!UBERON:0005631;1.37e-08;10!UBERON:0000158;1.37e-08;10!UBERON:0005172;2.54e-08;52!UBERON:0005173;2.54e-08;52!UBERON:0006555;4.25e-08;15!UBERON:0004819;4.25e-08;15!UBERON:0001285;4.25e-08;15!UBERON:0007684;4.25e-08;15!UBERON:0002107;1.11e-07;19!UBERON:0006925;1.11e-07;19!UBERON:0004211;1.58e-07;10!UBERON:0009773;1.58e-07;10!UBERON:0001231;1.58e-07;10!UBERON:0004810;1.58e-07;10!UBERON:0000478;2.15e-07;24!UBERON:0002417;6.52e-07;58!UBERON:0000916;6.52e-07;58!UBERON:0001851;7.45e-07;15 | ||
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| ||
|short_description=p3@KRT18 | |short_description=p3@KRT18 | ||
}} | }} |
Latest revision as of 01:17, 19 September 2015
Short description: | p3@KRT18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KRT18_5end |
Coexpression cluster: | C819_Alveolar_MCF7_mesothelioma_endometrioid_signet_Renal_gastric |
Association with transcript: | 402bp_to_ENST00000548496_5end |
EntrezGene: | KRT18 |
HGNC: | 6430 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.51e-36 | 253 |
mesothelial cell | 1.63e-19 | 19 |
endodermal cell | 3.53e-09 | 58 |
extraembryonic cell | 4.46e-09 | 19 |
embryonic cell | 7.54e-09 | 250 |
epithelial cell of nephron | 6.16e-08 | 15 |
germ line cell | 1.57e-07 | 7 |
germ cell | 1.57e-07 | 7 |
kidney tubule cell | 2.06e-07 | 10 |
nephron tubule epithelial cell | 2.06e-07 | 10 |
lining cell | 2.83e-07 | 58 |
barrier cell | 2.83e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.46e-19 | 106 |
cell type cancer | 8.71e-16 | 143 |
adenocarcinoma | 3.50e-10 | 25 |
cancer | 3.28e-09 | 235 |
disease of cellular proliferation | 3.90e-09 | 239 |