FFCP PHASE1:Hg19::chr21:17442799..17442832,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=388815 | |EntrezGene=388815 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=1274 | |HGNC=1274 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_ENST00000458468,NR_027790,uc002ykb.2_5end | |association_with_transcript=-9bp_to_ENST00000458468,NR_027790,uc002ykb.2_5end | ||
|cluster_id=chr21:17442799..17442832,+ | |||
|coexpression_cluster_id=C334 | |coexpression_cluster_id=C334 | ||
|description=CAGE_peak_17_at_LINC00478_5end | |description=CAGE_peak_17_at_LINC00478_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.35e-26;82!UBERON:0006215;1.75e-11;3!UBERON:0006241;2.47e-10;3!UBERON:0003057;2.47e-10;3!UBERON:0010122;4.76e-08;2 | |ontology_enrichment_development_v019=UBERON:0006601;2.35e-26;82!UBERON:0006215;1.75e-11;3!UBERON:0006241;2.47e-10;3!UBERON:0003057;2.47e-10;3!UBERON:0010122;4.76e-08;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.92e-69!57;UBERON:0005068!7.92e-69!57;UBERON:0006241!7.92e-69!57;UBERON:0007135!7.92e-69!57;UBERON:0000073!7.08e-68!94;UBERON:0001016!7.08e-68!94;UBERON:0005743!8.94e-66!86;UBERON:0001017!1.55e-65!82;UBERON:0002616!3.57e-62!59;UBERON:0000955!5.59e-61!69;UBERON:0006238!5.59e-61!69;UBERON:0002780!7.44e-55!41;UBERON:0001890!7.44e-55!41;UBERON:0006240!7.44e-55!41;UBERON:0003080!3.17e-53!42;UBERON:0002346!3.52e-52!90;UBERON:0003075!5.89e-52!86;UBERON:0007284!5.89e-52!86;UBERON:0007023!2.79e-45!115;UBERON:0001893!3.40e-44!34;UBERON:0002020!6.43e-44!34;UBERON:0003528!6.43e-44!34;UBERON:0002791!1.06e-42!33;UBERON:0001869!2.76e-41!32;UBERON:0000924!4.97e-40!173;UBERON:0006601!4.97e-40!173;UBERON:0000033!5.15e-40!123;UBERON:0000153!7.58e-40!129;UBERON:0007811!7.58e-40!129;UBERON:0003056!1.56e-39!61;UBERON:0004121!3.16e-39!169;UBERON:0000956!2.95e-31!25;UBERON:0000203!2.95e-31!25;UBERON:0001950!3.62e-28!20;UBERON:0002619!4.45e-28!22;UBERON:0003076!4.64e-16!15;UBERON:0003057!4.64e-16!15;UBERON:0000475!2.47e-14!365;UBERON:0002420!3.16e-14!9;UBERON:0007245!3.16e-14!9;UBERON:0010009!3.16e-14!9;UBERON:0010011!3.16e-14!9;UBERON:0000454!3.16e-14!9;UBERON:0002308!5.40e-14!9;UBERON:0000125!5.40e-14!9;UBERON:0004732!2.36e-13!13;UBERON:0000025!5.30e-13!194;UBERON:0004111!6.67e-13!241;UBERON:0004733!4.06e-12!12;UBERON:0002028!4.06e-12!12;UBERON:0007277!4.06e-12!12;UBERON:0000477!6.32e-12!286;UBERON:0000062!6.58e-12!511;UBERON:0001894!6.79e-12!7;UBERON:0006222!6.79e-12!7;UBERON:0009663!2.18e-11!7;UBERON:0000468!1.68e-10!659;UBERON:0000064!2.12e-10!219;UBERON:0000119!2.45e-10!312;UBERON:0000467!2.89e-10!625;UBERON:0000480!3.40e-10!626;UBERON:0000483!3.97e-10!309;UBERON:0000200!4.50e-10!6;UBERON:0001871!5.25e-10!7;UBERON:0000922!8.48e-10!612;UBERON:0002298!2.09e-09!8;UBERON:0002050!2.93e-09!605;UBERON:0005423!2.93e-09!605;UBERON:0000923!7.92e-09!604;UBERON:0005291!7.92e-09!604;UBERON:0006598!7.92e-09!604;UBERON:0002532!7.92e-09!604;UBERON:0001872!8.20e-09!5;UBERON:0002021!1.37e-08!5;UBERON:0000481!2.48e-08!347;UBERON:0002680!2.69e-08!9;UBERON:0001895!2.69e-08!9;UBERON:0010092!2.69e-08!9;UBERON:0003296!8.94e-08!4;UBERON:0010133!8.94e-08!4;UBERON:0000369!2.91e-07!4;UBERON:0002435!2.91e-07!4;UBERON:0000204!2.91e-07!4;UBERON:0010082!2.91e-07!4 | |ontology_enrichment_uberon=UBERON:0001049!7.92e-69!57;UBERON:0005068!7.92e-69!57;UBERON:0006241!7.92e-69!57;UBERON:0007135!7.92e-69!57;UBERON:0000073!7.08e-68!94;UBERON:0001016!7.08e-68!94;UBERON:0005743!8.94e-66!86;UBERON:0001017!1.55e-65!82;UBERON:0002616!3.57e-62!59;UBERON:0000955!5.59e-61!69;UBERON:0006238!5.59e-61!69;UBERON:0002780!7.44e-55!41;UBERON:0001890!7.44e-55!41;UBERON:0006240!7.44e-55!41;UBERON:0003080!3.17e-53!42;UBERON:0002346!3.52e-52!90;UBERON:0003075!5.89e-52!86;UBERON:0007284!5.89e-52!86;UBERON:0007023!2.79e-45!115;UBERON:0001893!3.40e-44!34;UBERON:0002020!6.43e-44!34;UBERON:0003528!6.43e-44!34;UBERON:0002791!1.06e-42!33;UBERON:0001869!2.76e-41!32;UBERON:0000924!4.97e-40!173;UBERON:0006601!4.97e-40!173;UBERON:0000033!5.15e-40!123;UBERON:0000153!7.58e-40!129;UBERON:0007811!7.58e-40!129;UBERON:0003056!1.56e-39!61;UBERON:0004121!3.16e-39!169;UBERON:0000956!2.95e-31!25;UBERON:0000203!2.95e-31!25;UBERON:0001950!3.62e-28!20;UBERON:0002619!4.45e-28!22;UBERON:0003076!4.64e-16!15;UBERON:0003057!4.64e-16!15;UBERON:0000475!2.47e-14!365;UBERON:0002420!3.16e-14!9;UBERON:0007245!3.16e-14!9;UBERON:0010009!3.16e-14!9;UBERON:0010011!3.16e-14!9;UBERON:0000454!3.16e-14!9;UBERON:0002308!5.40e-14!9;UBERON:0000125!5.40e-14!9;UBERON:0004732!2.36e-13!13;UBERON:0000025!5.30e-13!194;UBERON:0004111!6.67e-13!241;UBERON:0004733!4.06e-12!12;UBERON:0002028!4.06e-12!12;UBERON:0007277!4.06e-12!12;UBERON:0000477!6.32e-12!286;UBERON:0000062!6.58e-12!511;UBERON:0001894!6.79e-12!7;UBERON:0006222!6.79e-12!7;UBERON:0009663!2.18e-11!7;UBERON:0000468!1.68e-10!659;UBERON:0000064!2.12e-10!219;UBERON:0000119!2.45e-10!312;UBERON:0000467!2.89e-10!625;UBERON:0000480!3.40e-10!626;UBERON:0000483!3.97e-10!309;UBERON:0000200!4.50e-10!6;UBERON:0001871!5.25e-10!7;UBERON:0000922!8.48e-10!612;UBERON:0002298!2.09e-09!8;UBERON:0002050!2.93e-09!605;UBERON:0005423!2.93e-09!605;UBERON:0000923!7.92e-09!604;UBERON:0005291!7.92e-09!604;UBERON:0006598!7.92e-09!604;UBERON:0002532!7.92e-09!604;UBERON:0001872!8.20e-09!5;UBERON:0002021!1.37e-08!5;UBERON:0000481!2.48e-08!347;UBERON:0002680!2.69e-08!9;UBERON:0001895!2.69e-08!9;UBERON:0010092!2.69e-08!9;UBERON:0003296!8.94e-08!4;UBERON:0010133!8.94e-08!4;UBERON:0000369!2.91e-07!4;UBERON:0002435!2.91e-07!4;UBERON:0000204!2.91e-07!4;UBERON:0010082!2.91e-07!4 | ||
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|short_description=p17@LINC00478 | |short_description=p17@LINC00478 | ||
}} | }} |
Latest revision as of 19:25, 17 September 2015
Short description: | p17@LINC00478 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_LINC00478_5end |
Coexpression cluster: | C334_cerebellum_pineal_occipital_pituitary_amygdala_medial_caudate |
Association with transcript: | -9bp_to_ENST00000458468, NR_027790, uc002ykb.2_5end |
EntrezGene: | LINC00478 |
HGNC: | 1274 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data