FFCP PHASE1:Hg19::chr20:590944..590960,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:590944..590960,-
|short_description=p1@TCF15
|description=CAGE_peak_1_at_TCF15_5end
|association_with_transcript=-34bp_to_NM_004609,uc002wdz.2_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6939 | |EntrezGene=6939 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11627 | |HGNC=11627 | ||
|TSSclassifier=strong | |||
|UniProt=A4LBB6,Q12870,Q6NVX3 | |UniProt=A4LBB6,Q12870,Q6NVX3 | ||
|association_with_transcript=-34bp_to_NM_004609,uc002wdz.2_5end | |||
|cluster_id=chr20:590944..590960,- | |||
|description=CAGE_peak_1_at_TCF15_5end | |||
|id=chr20:590944..590960,- | |||
|ontology_enrichment_celltype=CL:0000115!2.02e-09!35;CL:0002078!7.55e-09!44;CL:0002139!9.88e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0002188;7.42e-11;5!CL:0000115;1.63e-10;36!CL:0002322;8.61e-10;5!CL:1000746;1.33e-07;7!CL:1000612;1.33e-07;7!CL:0002618;7.13e-07;3!CL:0002078;9.29e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.95e-12,36;CL:0002188,5.67e-11,5;CL:0002322,5.94e-10,5;CL:0002078,6.16e-10,45;CL:1000746,1.11e-07,7;CL:1000612,1.11e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.75e-19!115;UBERON:0001049!5.13e-10!57;UBERON:0005068!5.13e-10!57;UBERON:0006241!5.13e-10!57;UBERON:0007135!5.13e-10!57;UBERON:0003075!1.78e-08!86;UBERON:0007284!1.78e-08!86;UBERON:0000025!2.94e-08!194;UBERON:0001017!4.37e-08!82;UBERON:0002346!5.54e-08!90;UBERON:0002616!7.84e-08!59;UBERON:0005743!1.17e-07!86;UBERON:0004111!1.26e-07!241;UBERON:0002619!1.26e-07!22;UBERON:0003080!1.29e-07!42;UBERON:0002020!1.47e-07!34;UBERON:0003528!1.47e-07!34;UBERON:0001893!1.85e-07!34;UBERON:0000073!3.44e-07!94;UBERON:0001016!3.44e-07!94;UBERON:0002791!3.84e-07!33;UBERON:0001869!5.30e-07!32;UBERON:0002780!5.30e-07!41;UBERON:0001890!5.30e-07!41;UBERON:0006240!5.30e-07!41;UBERON:0000955!6.31e-07!69;UBERON:0006238!6.31e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;5.60e-13;49!UBERON:0003978;6.70e-08;3!UBERON:0000946;6.70e-08;3!UBERON:0004151;7.64e-08;3!UBERON:0000074;1.33e-07;7!UBERON:0001229;1.33e-07;7!UBERON:0007100;2.43e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,7.04e-08,3;UBERON:0009751,7.04e-08,3;UBERON:0000946,7.04e-08,3;UBERON:0002523,7.04e-08,3;UBERON:0005983,7.04e-08,3;UBERON:0002165,7.04e-08,3;UBERON:0002062,7.04e-08,3;UBERON:0007280,7.04e-08,3;UBERON:0004151,7.52e-08,3;UBERON:0003103,1.03e-07,68;UBERON:0010532,1.11e-07,7;UBERON:0000074,1.11e-07,7;UBERON:0001229,1.11e-07,7;UBERON:0001230,1.11e-07,7;UBERON:0003220,1.11e-07,7;UBERON:0005749,1.11e-07,7;UBERON:0004199,1.11e-07,7;UBERON:0004209,1.11e-07,7;UBERON:0004198,1.11e-07,7 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02420515822182,0.895037932904712,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,1.67799774483962,0.550236083880135,0,2.06733407335463,0.71153252537342,2.34304428935269,0.805658634218294,0.760272105718513,3.66093086322254,0.735326160691737,0,1.25019619597712,4.04152870727106,3.0405099730497,0,0.949265659568129,2.5648244150257,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6834215348511,1.45782745153634,2.32387885739037,1.96956004529204,3.28017106138317,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69077727312324,11.2193419042757,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0,1.15493158208859,1.38895653772983,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.1466765716419,0,0,2.535908257668,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,1.03473071292505,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308061348417659,0,0,0,13.6480060885076,14.4579649485038,1.94324324491925,16.9649977959318,0,0,0.254876273045038,0,0.223874754722178,0.438519753291869,0,0,0,0,0.9273691048295,0.0915694648183434,0.247528499761764,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,1.92495971052672,1.96032172784825,0,0,0,0,1.39705560002972,1.7235483311913,1.05836791361941,0,0.842391534340376,0,0,0,0,0,0.201799707191048,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0,0,2.46174797895425,3.51592382018778,0,2.81974010175699,0,2.63714722689409,0,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0.994147647766298,0.281338832821026,0,0,0.63337622438398,0.796991953004279,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,5.79999660347835,1.4793148277115,0,0.709163045303809,4.82640722538051,0.291604613383254,2.08349993919951,0,0.60298219312704,0,0.110579259931225,0.295547618953547,0.438770794307945,0,0,0.384751292518985,0,1.84451123510448,0.538545866458633,0.977826347298073,0.638002319463839,0.183195186803725,0,0,0,0.831058409500782,0.451191321234361,2.35275041181287,1.84603745673427,0,0,0,0.326465616318295,0,0,0,0.796118080530053,1.22206028986725,2.6686901581256,2.71840665682306,1.98401704060365,0.067401132980677,17.6567082405734,0.234264445725339,0,0,0,0,1.20990716048664,0.61214552326098,0.063186579628488,0,0,1.32930774541437,0.661983911750998,2.82539626566503,0,0,0,0,0,3.22119064347489,0,0,0,0,0,1.45483524732629,0,2.71176888936639,0,0,0.0633107959558787,1.95551382734803,0,0.426905989478705,0,0.864542502924636,0,0,0,0,0,0,0,0,0,0,0.547621515567972,1.27746588066972,0,0,8.09918963689537,13.062144168666,11.485968393229,7.98716001995964,13.3060074922337,13.3902874465124,10.4134382354426,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,1.76828463311521,2.06309154895851,3.32352270423348,0,0,0.242998226632099,0,0.0788057072991982,0.996637174564964,0,0,0,8.5763439164804,10.5934715258469,0,0,0,0,0,2.87323822622686,0,1.01980882368113,0.146552233678082,0,0.258565912723101,0.26446520348538,0,0,0.640724475406168,0.78602152549833,0.414239055347196,0,0,0,0,4.35214242695579,7.0193170326356,1.53172788381731,0.983617892129413,0.628216385000937,0,0.122026264901963,0.3755727921195,0.573409195690071,0.443716206147409,0.558867626472451,1.93688088910723,0,0,0.570930667089935,0,0,1.59413131471908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.770479321629213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0.655219697692825,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0,1.79052119825112,0,0.157265941855896,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0.192687675289379,0,0.478901577171454,0.205116364240755,0.252071696221718,0.345786262321089,0,0,0,0.471878893390961,0,0,0,1.3807198521202,0,0.150420656698515,0.40341013740704,0,1.30953347240711,0,0,0.270150338473579,0,0.826747186004736,0.19024743058172,0.546974809018219,0,2.48105589194647,0,0,0.535701835878287,0,0,0,5.14473746943305,0.115233987555779,0,0.475788130837822,0.197318320688547,0.118193840883968,0.222462803784138,0.706437835654626,0.157115589916002,0,4.56579360254748,0,0,0.285906176706625,3.00225862292181,0,1.39086617842064,0,0,0,0,0.430227358820278,0,0,0,0,0.62041277132864,0,0.447421727191169,0,0,2.58971534875158,5.54379157023734,5.799072156691,1.94284397223656,0.701818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| 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| ||
|short_description=p1@TCF15 | |||
}} | }} |
Latest revision as of 09:10, 17 September 2015
Short description: | p1@TCF15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TCF15_5end |
Coexpression cluster: | NA |
Association with transcript: | -34bp_to_NM_004609, uc002wdz.2_5end |
EntrezGene: | TCF15 |
HGNC: | 11627 |
UniProt: | A4LBB6Q12870Q6NVX3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.95e-12 | 36 |
glomerular endothelial cell | 5.67e-11 | 5 |
embryonic stem cell | 5.94e-10 | 5 |
meso-epithelial cell | 6.16e-10 | 45 |
glomerular cell | 1.11e-07 | 7 |
kidney corpuscule cell | 1.11e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
valve | 7.04e-08 | 3 |
cardiac mesenchyme | 7.04e-08 | 3 |
cardial valve | 7.04e-08 | 3 |
tunica intima | 7.04e-08 | 3 |
heart layer | 7.04e-08 | 3 |
endocardium | 7.04e-08 | 3 |
endocardial cushion | 7.04e-08 | 3 |
presumptive endocardium | 7.04e-08 | 3 |
cardiac chamber | 7.52e-08 | 3 |
compound organ | 1.03e-07 | 68 |
primitive nephron | 1.11e-07 | 7 |
renal glomerulus | 1.11e-07 | 7 |
renal corpuscle | 1.11e-07 | 7 |
glomerular capsule | 1.11e-07 | 7 |
metanephric mesenchyme | 1.11e-07 | 7 |
glomerular tuft | 1.11e-07 | 7 |
S-shaped body | 1.11e-07 | 7 |
renal vesicle | 1.11e-07 | 7 |
comma-shaped body | 1.11e-07 | 7 |