FFCP PHASE1:Hg19::chr5:140868633..140868666,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56097 | |EntrezGene=56097 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8718 | |HGNC=8718 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5F6 | |UniProt=Q9Y5F6 | ||
|association_with_transcript=-141bp_to_ENST00000252087,NM_018929,NM_032407,uc003lla.1,uc011dbc.1_5end | |association_with_transcript=-141bp_to_ENST00000252087,NM_018929,NM_032407,uc003lla.1,uc011dbc.1_5end | ||
|cluster_id=chr5:140868633..140868666,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_2_at_PCDHGC5_5end | |description=CAGE_peak_2_at_PCDHGC5_5end | ||
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|ontology_enrichment_celltype=CL:0000055!7.89e-12!180;CL:0000680!8.38e-10!57;CL:0000056!8.38e-10!57;CL:0000355!8.38e-10!57;CL:0000192!1.21e-09!42;CL:0000514!1.21e-09!42;CL:0000187!1.39e-08!54;CL:0000183!1.18e-07!59;CL:0000359!2.08e-07!32;CL:0000393!2.35e-07!60;CL:0000211!2.35e-07!60 | |ontology_enrichment_celltype=CL:0000055!7.89e-12!180;CL:0000680!8.38e-10!57;CL:0000056!8.38e-10!57;CL:0000355!8.38e-10!57;CL:0000192!1.21e-09!42;CL:0000514!1.21e-09!42;CL:0000187!1.39e-08!54;CL:0000183!1.18e-07!59;CL:0000359!2.08e-07!32;CL:0000393!2.35e-07!60;CL:0000211!2.35e-07!60 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.06e-13;82 | |ontology_enrichment_development_v019=UBERON:0006601;1.06e-13;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;5.80e-08;3!DOID:127;5.80e-08;3 | |ontology_enrichment_disease_v019=DOID:0060084;5.80e-08;3!DOID:127;5.80e-08;3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.20e-08,3;DOID:127,3.20e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.57e-35!57;UBERON:0005068!1.57e-35!57;UBERON:0006241!1.57e-35!57;UBERON:0007135!1.57e-35!57;UBERON:0001017!1.39e-31!82;UBERON:0000955!9.38e-31!69;UBERON:0006238!9.38e-31!69;UBERON:0002616!5.06e-30!59;UBERON:0005743!6.31e-30!86;UBERON:0000073!2.23e-28!94;UBERON:0001016!2.23e-28!94;UBERON:0002780!2.36e-28!41;UBERON:0001890!2.36e-28!41;UBERON:0006240!2.36e-28!41;UBERON:0003080!2.54e-27!42;UBERON:0001893!1.81e-25!34;UBERON:0002020!5.03e-25!34;UBERON:0003528!5.03e-25!34;UBERON:0002791!2.04e-24!33;UBERON:0001869!7.68e-24!32;UBERON:0003075!9.43e-24!86;UBERON:0007284!9.43e-24!86;UBERON:0002346!1.43e-22!90;UBERON:0000033!3.62e-20!123;UBERON:0000475!1.29e-19!365;UBERON:0000153!9.03e-19!129;UBERON:0007811!9.03e-19!129;UBERON:0003056!9.97e-18!61;UBERON:0000956!3.83e-17!25;UBERON:0000203!3.83e-17!25;UBERON:0002619!6.37e-16!22;UBERON:0007023!7.17e-16!115;UBERON:0004121!4.31e-15!169;UBERON:0000924!1.15e-14!173;UBERON:0006601!1.15e-14!173;UBERON:0001950!5.31e-14!20;UBERON:0000025!6.07e-14!194;UBERON:0000483!5.05e-13!309;UBERON:0000119!5.58e-13!312;UBERON:0004111!9.25e-12!241;UBERON:0002420!4.54e-10!9;UBERON:0007245!4.54e-10!9;UBERON:0010009!4.54e-10!9;UBERON:0010011!4.54e-10!9;UBERON:0000454!4.54e-10!9;UBERON:0000477!9.78e-10!286;UBERON:0002308!1.70e-09!9;UBERON:0000125!1.70e-09!9;UBERON:0000914!2.70e-09!83;UBERON:0002329!2.70e-09!83;UBERON:0003077!2.70e-09!83;UBERON:0003059!2.70e-09!83;UBERON:0007282!2.70e-09!83;UBERON:0009618!2.70e-09!83;UBERON:0007285!2.70e-09!83;UBERON:0003076!3.02e-09!15;UBERON:0003057!3.02e-09!15;UBERON:0000481!1.13e-08!347;UBERON:0001134!1.71e-08!61;UBERON:0002036!1.71e-08!61;UBERON:0003082!1.71e-08!61;UBERON:0002385!2.01e-08!63;UBERON:0001015!2.01e-08!63;UBERON:0000383!2.01e-08!63;UBERON:0004573!3.70e-08!33;UBERON:0004571!3.70e-08!33;UBERON:0000486!4.89e-08!82;UBERON:0009663!5.45e-08!7;UBERON:0004290!6.68e-08!70;UBERON:0000200!1.01e-07!6;UBERON:0000467!1.11e-07!625;UBERON:0000480!1.37e-07!626;UBERON:0000468!4.50e-07!659;UBERON:0004733!4.97e-07!12;UBERON:0002028!4.97e-07!12;UBERON:0007277!4.97e-07!12;UBERON:0000349!8.78e-07!5 | |ontology_enrichment_uberon=UBERON:0001049!1.57e-35!57;UBERON:0005068!1.57e-35!57;UBERON:0006241!1.57e-35!57;UBERON:0007135!1.57e-35!57;UBERON:0001017!1.39e-31!82;UBERON:0000955!9.38e-31!69;UBERON:0006238!9.38e-31!69;UBERON:0002616!5.06e-30!59;UBERON:0005743!6.31e-30!86;UBERON:0000073!2.23e-28!94;UBERON:0001016!2.23e-28!94;UBERON:0002780!2.36e-28!41;UBERON:0001890!2.36e-28!41;UBERON:0006240!2.36e-28!41;UBERON:0003080!2.54e-27!42;UBERON:0001893!1.81e-25!34;UBERON:0002020!5.03e-25!34;UBERON:0003528!5.03e-25!34;UBERON:0002791!2.04e-24!33;UBERON:0001869!7.68e-24!32;UBERON:0003075!9.43e-24!86;UBERON:0007284!9.43e-24!86;UBERON:0002346!1.43e-22!90;UBERON:0000033!3.62e-20!123;UBERON:0000475!1.29e-19!365;UBERON:0000153!9.03e-19!129;UBERON:0007811!9.03e-19!129;UBERON:0003056!9.97e-18!61;UBERON:0000956!3.83e-17!25;UBERON:0000203!3.83e-17!25;UBERON:0002619!6.37e-16!22;UBERON:0007023!7.17e-16!115;UBERON:0004121!4.31e-15!169;UBERON:0000924!1.15e-14!173;UBERON:0006601!1.15e-14!173;UBERON:0001950!5.31e-14!20;UBERON:0000025!6.07e-14!194;UBERON:0000483!5.05e-13!309;UBERON:0000119!5.58e-13!312;UBERON:0004111!9.25e-12!241;UBERON:0002420!4.54e-10!9;UBERON:0007245!4.54e-10!9;UBERON:0010009!4.54e-10!9;UBERON:0010011!4.54e-10!9;UBERON:0000454!4.54e-10!9;UBERON:0000477!9.78e-10!286;UBERON:0002308!1.70e-09!9;UBERON:0000125!1.70e-09!9;UBERON:0000914!2.70e-09!83;UBERON:0002329!2.70e-09!83;UBERON:0003077!2.70e-09!83;UBERON:0003059!2.70e-09!83;UBERON:0007282!2.70e-09!83;UBERON:0009618!2.70e-09!83;UBERON:0007285!2.70e-09!83;UBERON:0003076!3.02e-09!15;UBERON:0003057!3.02e-09!15;UBERON:0000481!1.13e-08!347;UBERON:0001134!1.71e-08!61;UBERON:0002036!1.71e-08!61;UBERON:0003082!1.71e-08!61;UBERON:0002385!2.01e-08!63;UBERON:0001015!2.01e-08!63;UBERON:0000383!2.01e-08!63;UBERON:0004573!3.70e-08!33;UBERON:0004571!3.70e-08!33;UBERON:0000486!4.89e-08!82;UBERON:0009663!5.45e-08!7;UBERON:0004290!6.68e-08!70;UBERON:0000200!1.01e-07!6;UBERON:0000467!1.11e-07!625;UBERON:0000480!1.37e-07!626;UBERON:0000468!4.50e-07!659;UBERON:0004733!4.97e-07!12;UBERON:0002028!4.97e-07!12;UBERON:0007277!4.97e-07!12;UBERON:0000349!8.78e-07!5 | ||
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| ||
|short_description=p2@PCDHGC5 | |short_description=p2@PCDHGC5 | ||
}} | }} |
Latest revision as of 04:38, 25 September 2015
Short description: | p2@PCDHGC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PCDHGC5_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -141bp_to_ENST00000252087, NM_018929, NM_032407, uc003lla.1, uc011dbc.1_5end |
EntrezGene: | PCDHGC5 |
HGNC: | 8718 |
UniProt: | Q9Y5F6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.20e-08 | 3 |
leiomyoma | 3.20e-08 | 3 |