FFCP PHASE1:Hg19::chr17:37824217..37824226,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5409 | |EntrezGene=5409 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9160 | |HGNC=9160 | ||
|TSSclassifier=strong | |||
|UniProt=A8MT87 | |UniProt=A8MT87 | ||
|association_with_transcript=-7bp_to_ENST00000394246_5end | |association_with_transcript=-7bp_to_ENST00000394246_5end | ||
|cluster_id=chr17:37824217..37824226,+ | |||
|coexpression_cluster_id=C360 | |coexpression_cluster_id=C360 | ||
|description=CAGE_peak_12_at_PNMT_5end | |description=CAGE_peak_12_at_PNMT_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000349!6.61e-12!3;CL:0002577!6.61e-12!3;CL:0002536!2.14e-08!2 | |ontology_enrichment_celltype=CL:0000349!6.61e-12!3;CL:0002577!6.61e-12!3;CL:0002536!2.14e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002577;4.05e-85;3!CL:0000349;2.45e-24;19!CL:0002536;2.05e-15;2!CL:0002535;2.05e-15;2 | |ontology_enrichment_celltype_v019=CL:0002577;4.05e-85;3!CL:0000349;2.45e-24;19!CL:0002536;2.05e-15;2!CL:0002535;2.05e-15;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002577,4.06e-85,3;CL:0000349,2.17e-24,19;CL:0002536,1.54e-15,2;CL:0002535,1.78e-15,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4362;6.04e-07;5 | |ontology_enrichment_disease_v019=DOID:4362;6.04e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:4362,5.70e-07,5 | |||
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| ||
|short_description=p12@PNMT | |short_description=p12@PNMT | ||
}} | }} |
Latest revision as of 22:27, 19 September 2015
Short description: | p12@PNMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PNMT_5end |
Coexpression cluster: | C360_Placental_Amniotic_amniotic_teratocarcinoma_chorionic_neuroblastoma_H9 |
Association with transcript: | -7bp_to_ENST00000394246_5end |
EntrezGene: | PNMT |
HGNC: | 9160 |
UniProt: | A8MT87 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 4.06e-85 | 3 |
extraembryonic cell | 2.17e-24 | 19 |
amniotic epithelial cell | 1.54e-15 | 2 |
epithelial cell of cervix | 1.78e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
placenta | 4.02e-64 | 4 |
allantois | 4.02e-64 | 4 |
chorion | 4.35e-37 | 7 |
extraembryonic membrane | 7.55e-33 | 14 |
membranous layer | 7.55e-33 | 14 |
uterus | 4.18e-22 | 21 |
embryonic uterus | 3.95e-21 | 22 |
internal female genitalia | 3.95e-21 | 22 |
extraembryonic structure | 1.92e-19 | 24 |
internal genitalia | 1.14e-18 | 25 |
uterine epithelium | 1.78e-15 | 2 |
cervix epithelium | 1.78e-15 | 2 |
female reproductive organ | 8.49e-13 | 37 |
female reproductive system | 8.49e-13 | 37 |
female organism | 1.34e-11 | 41 |
reproductive organ | 5.61e-10 | 48 |
mixed endoderm/mesoderm-derived structure | 1.48e-09 | 29 |
reproductive structure | 3.36e-08 | 59 |
reproductive system | 3.36e-08 | 59 |
organ component layer | 2.22e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 5.70e-07 | 5 |