FFCP PHASE1:Hg19::chr11:618971..619000,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:618971..619000,- | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_at_chr11:618971..619000,- | |description=CAGE_peak_at_chr11:618971..619000,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002563!2.13e-11!4 | |ontology_enrichment_celltype=CL:0002563!2.13e-11!4 | ||
|ontology_enrichment_celltype_v019=CL:0002563;1.86e-07;4 | |ontology_enrichment_celltype_v019=CL:0002563;1.86e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.80e-07,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.01e-18!27;UBERON:0005409!7.03e-14!35;UBERON:0001242!2.13e-11!4;UBERON:0001262!2.13e-11!4;UBERON:0004786!2.13e-11!4;UBERON:0004808!2.13e-11!4;UBERON:0001277!2.13e-11!4;UBERON:0001155!4.08e-11!9;UBERON:0003350!2.68e-09!5;UBERON:0000059!3.43e-09!11;UBERON:0003929!8.48e-09!54;UBERON:0004921!3.06e-08!129;UBERON:0004185!3.06e-08!129;UBERON:0001007!5.71e-08!155;UBERON:0001555!5.71e-08!155;UBERON:0007026!5.71e-08!155;UBERON:0004119!3.66e-07!169;UBERON:0000925!3.66e-07!169;UBERON:0006595!3.66e-07!169;UBERON:0002108!4.50e-07!14 | |ontology_enrichment_uberon=UBERON:0000160!5.01e-18!27;UBERON:0005409!7.03e-14!35;UBERON:0001242!2.13e-11!4;UBERON:0001262!2.13e-11!4;UBERON:0004786!2.13e-11!4;UBERON:0004808!2.13e-11!4;UBERON:0001277!2.13e-11!4;UBERON:0001155!4.08e-11!9;UBERON:0003350!2.68e-09!5;UBERON:0000059!3.43e-09!11;UBERON:0003929!8.48e-09!54;UBERON:0004921!3.06e-08!129;UBERON:0004185!3.06e-08!129;UBERON:0001007!5.71e-08!155;UBERON:0001555!5.71e-08!155;UBERON:0007026!5.71e-08!155;UBERON:0004119!3.66e-07!169;UBERON:0000925!3.66e-07!169;UBERON:0006595!3.66e-07!169;UBERON:0002108!4.50e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.56e-49;17!UBERON:0002108;2.04e-45;4!UBERON:0005409;1.10e-38;22!UBERON:0004921;1.08e-23;33!UBERON:0001155;6.51e-12;9!UBERON:0001555;3.27e-10;54!UBERON:0000059;6.34e-10;11!UBERON:0002114;1.24e-09;2!UBERON:0001007;5.55e-09;81!UBERON:0001242;1.86e-07;4!UBERON:0001262;1.86e-07;4!UBERON:0004786;1.86e-07;4!UBERON:0004808;1.86e-07;4!UBERON:0001277;1.86e-07;4!UBERON:0000922;6.90e-07;49 | |ontology_enrichment_uberon_v019=UBERON:0000160;2.56e-49;17!UBERON:0002108;2.04e-45;4!UBERON:0005409;1.10e-38;22!UBERON:0004921;1.08e-23;33!UBERON:0001155;6.51e-12;9!UBERON:0001555;3.27e-10;54!UBERON:0000059;6.34e-10;11!UBERON:0002114;1.24e-09;2!UBERON:0001007;5.55e-09;81!UBERON:0001242;1.86e-07;4!UBERON:0001262;1.86e-07;4!UBERON:0004786;1.86e-07;4!UBERON:0004808;1.86e-07;4!UBERON:0001277;1.86e-07;4!UBERON:0000922;6.90e-07;49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.36e-49,17;UBERON:0002108,2.20e-45,4;UBERON:0005409,2.74e-34,25;UBERON:0001155,6.16e-12,9;UBERON:0004921,3.29e-10,118;UBERON:0000059,6.06e-10,11;UBERON:0002114,1.30e-09,2;UBERON:0001007,2.61e-08,145;UBERON:0001555,2.61e-08,145;UBERON:0007026,2.61e-08,145;UBERON:0004119,1.59e-07,160;UBERON:0000925,1.59e-07,160;UBERON:0006595,1.59e-07,160;UBERON:0001242,1.80e-07,4;UBERON:0001262,1.80e-07,4;UBERON:0004786,1.80e-07,4;UBERON:0004808,1.80e-07,4;UBERON:0001277,1.80e-07,4;UBERON:0011216,6.23e-07,223 | |||
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|short_description=p@chr11:618971..619000,- | |short_description=p@chr11:618971..619000,- | ||
}} | }} |
Latest revision as of 23:37, 23 July 2015
Short description: | p@chr11:618971..619000, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:618971..619000, - |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.36e-49 | 17 |
small intestine | 2.20e-45 | 4 |
gastrointestinal system | 2.74e-34 | 25 |
colon | 6.16e-12 | 9 |
subdivision of digestive tract | 3.29e-10 | 118 |
large intestine | 6.06e-10 | 11 |
duodenum | 1.30e-09 | 2 |
digestive system | 2.61e-08 | 145 |
digestive tract | 2.61e-08 | 145 |
primitive gut | 2.61e-08 | 145 |
endoderm-derived structure | 1.59e-07 | 160 |
endoderm | 1.59e-07 | 160 |
presumptive endoderm | 1.59e-07 | 160 |
intestinal mucosa | 1.80e-07 | 4 |
wall of intestine | 1.80e-07 | 4 |
gastrointestinal system mucosa | 1.80e-07 | 4 |
gastrointestinal system epithelium | 1.80e-07 | 4 |
intestinal epithelium | 1.80e-07 | 4 |
organ system subdivision | 6.23e-07 | 223 |