FFCP PHASE1:Hg19::chr12:54378984..54378996,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3226 | |EntrezGene=3226 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5122 | |HGNC=5122 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NYD6 | |UniProt=Q9NYD6 | ||
|association_with_transcript=14bp_to_ENST00000303460_5end | |association_with_transcript=14bp_to_ENST00000303460_5end | ||
|cluster_id=chr12:54378984..54378996,+ | |||
|description=CAGE_peak_7_at_HOXC10_5end | |description=CAGE_peak_7_at_HOXC10_5end | ||
|id=chr12:54378984..54378996,+ | |id=chr12:54378984..54378996,+ | ||
|ontology_enrichment_celltype=CL:0000153!3.96e-10!9;CL:0000447!3.96e-10!9;CL:0000035!7.64e-09!20;CL:1000507!2.32e-08!12;CL:1000494!2.32e-08!12;CL:0000667!4.04e-07!6;CL:0000058!4.04e-07!6;CL:0000138!4.04e-07!6;CL:0000499!4.30e-07!27;CL:0000188!5.35e-07!9;CL:1000497!9.19e-07!18;CL:0002518!9.19e-07!18;CL:0000062!9.83e-07!11;CL:0000375!9.83e-07!11;CL:0000335!9.83e-07!11 | |ontology_enrichment_celltype=CL:0000153!3.96e-10!9;CL:0000447!3.96e-10!9;CL:0000035!7.64e-09!20;CL:1000507!2.32e-08!12;CL:1000494!2.32e-08!12;CL:0000667!4.04e-07!6;CL:0000058!4.04e-07!6;CL:0000138!4.04e-07!6;CL:0000499!4.30e-07!27;CL:0000188!5.35e-07!9;CL:1000497!9.19e-07!18;CL:0002518!9.19e-07!18;CL:0000062!9.83e-07!11;CL:0000375!9.83e-07!11;CL:0000335!9.83e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000153;8.12e-17;9!CL:0000447;8.12e-17;9!CL:0000138;1.82e-10;6!CL:0000499;2.77e-10;28!CL:0000327;1.71e-09;15!CL:1000507;6.76e-09;10!CL:1000494;6.76e-09;10!CL:0002564;1.15e-08;3!CL:0000135;1.73e-08;3!CL:0000388;1.73e-08;3!CL:0000214;3.67e-08;3!CL:0000188;6.19e-07;9 | |ontology_enrichment_celltype_v019=CL:0000153;8.12e-17;9!CL:0000447;8.12e-17;9!CL:0000138;1.82e-10;6!CL:0000499;2.77e-10;28!CL:0000327;1.71e-09;15!CL:1000507;6.76e-09;10!CL:1000494;6.76e-09;10!CL:0002564;1.15e-08;3!CL:0000135;1.73e-08;3!CL:0000388;1.73e-08;3!CL:0000214;3.67e-08;3!CL:0000188;6.19e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.66e-16,9;CL:0000447,1.66e-16,9;CL:0000058,3.29e-10,6;CL:0000138,3.29e-10,6;CL:0000499,3.74e-10,28;CL:0000327,2.57e-09,15;CL:0002564,9.78e-09,3;CL:1000507,9.94e-09,10;CL:1000494,9.94e-09,10;CL:0000135,1.81e-08,3;CL:0000388,1.81e-08,3;CL:0000214,4.03e-08,3;CL:0000188,4.98e-07,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!1.67e-09!143 | |ontology_enrichment_disease=DOID:0050687!1.67e-09!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!4.23e-11!27;UBERON:0003918!4.23e-11!27;UBERON:0005095!4.23e-11!27;UBERON:0007687!4.23e-11!27;UBERON:0000489!2.19e-10!32;UBERON:0001737!6.22e-10!9;UBERON:0009773!2.32e-08!12;UBERON:0001231!2.32e-08!12;UBERON:0004810!2.32e-08!12;UBERON:0006554!1.08e-07!44;UBERON:0001008!2.26e-07!45;UBERON:0006555!3.29e-07!17;UBERON:0005103!3.29e-07!17;UBERON:0000083!3.29e-07!17;UBERON:0009201!3.29e-07!17;UBERON:0004819!3.29e-07!17;UBERON:0006553!3.29e-07!17;UBERON:0003074!3.29e-07!17;UBERON:0003060!3.29e-07!17;UBERON:0003104!6.80e-07!238;UBERON:0009142!6.80e-07!238;UBERON:0004876!9.12e-07!20 | |ontology_enrichment_uberon=UBERON:0002113!4.23e-11!27;UBERON:0003918!4.23e-11!27;UBERON:0005095!4.23e-11!27;UBERON:0007687!4.23e-11!27;UBERON:0000489!2.19e-10!32;UBERON:0001737!6.22e-10!9;UBERON:0009773!2.32e-08!12;UBERON:0001231!2.32e-08!12;UBERON:0004810!2.32e-08!12;UBERON:0006554!1.08e-07!44;UBERON:0001008!2.26e-07!45;UBERON:0006555!3.29e-07!17;UBERON:0005103!3.29e-07!17;UBERON:0000083!3.29e-07!17;UBERON:0009201!3.29e-07!17;UBERON:0004819!3.29e-07!17;UBERON:0006553!3.29e-07!17;UBERON:0003074!3.29e-07!17;UBERON:0003060!3.29e-07!17;UBERON:0003104!6.80e-07!238;UBERON:0009142!6.80e-07!238;UBERON:0004876!9.12e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0004905;4.17e-15;8!UBERON:0000982;4.17e-15;8!UBERON:0004770;4.17e-15;8!UBERON:0001737;1.77e-12;9!UBERON:0001557;1.77e-12;9!UBERON:0004765;8.18e-10;26!UBERON:0004211;6.76e-09;10!UBERON:0009773;6.76e-09;10!UBERON:0001231;6.76e-09;10!UBERON:0004810;6.76e-09;10!UBERON:0011135;9.21e-09;5!UBERON:0002216;9.21e-09;5!UBERON:0011134;9.21e-09;5!UBERON:0002209;9.21e-09;5!UBERON:0002213;9.21e-09;5!UBERON:0007844;9.21e-09;5!UBERON:0011138;9.21e-09;5!UBERON:0001130;9.21e-09;5!UBERON:0001066;9.21e-09;5!UBERON:0001468;9.21e-09;5!UBERON:0002204;1.05e-08;70!UBERON:0002242;1.15e-08;3!UBERON:0002113;1.64e-08;24!UBERON:0011143;1.64e-08;24!UBERON:0007846;1.73e-08;3!UBERON:0000043;1.73e-08;3!UBERON:0007845;1.73e-08;3!UBERON:0006915;3.67e-08;3!UBERON:0007616;3.67e-08;3!UBERON:0002217;3.67e-08;3!UBERON:0002018;3.67e-08;3!UBERON:0001434;6.36e-08;36!UBERON:0001134;4.52e-07;16!UBERON:0002036;4.52e-07;16 | |ontology_enrichment_uberon_v019=UBERON:0004905;4.17e-15;8!UBERON:0000982;4.17e-15;8!UBERON:0004770;4.17e-15;8!UBERON:0001737;1.77e-12;9!UBERON:0001557;1.77e-12;9!UBERON:0004765;8.18e-10;26!UBERON:0004211;6.76e-09;10!UBERON:0009773;6.76e-09;10!UBERON:0001231;6.76e-09;10!UBERON:0004810;6.76e-09;10!UBERON:0011135;9.21e-09;5!UBERON:0002216;9.21e-09;5!UBERON:0011134;9.21e-09;5!UBERON:0002209;9.21e-09;5!UBERON:0002213;9.21e-09;5!UBERON:0007844;9.21e-09;5!UBERON:0011138;9.21e-09;5!UBERON:0001130;9.21e-09;5!UBERON:0001066;9.21e-09;5!UBERON:0001468;9.21e-09;5!UBERON:0002204;1.05e-08;70!UBERON:0002242;1.15e-08;3!UBERON:0002113;1.64e-08;24!UBERON:0011143;1.64e-08;24!UBERON:0007846;1.73e-08;3!UBERON:0000043;1.73e-08;3!UBERON:0007845;1.73e-08;3!UBERON:0006915;3.67e-08;3!UBERON:0007616;3.67e-08;3!UBERON:0002217;3.67e-08;3!UBERON:0002018;3.67e-08;3!UBERON:0001434;6.36e-08;36!UBERON:0001134;4.52e-07;16!UBERON:0002036;4.52e-07;16 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,3.33e-15,8;UBERON:0000982,3.33e-15,8;UBERON:0004770,3.33e-15,8;UBERON:0001737,2.36e-12,9;UBERON:0011135,6.93e-09,5;UBERON:0002216,6.93e-09,5;UBERON:0011134,6.93e-09,5;UBERON:0002209,6.93e-09,5;UBERON:0002213,6.93e-09,5;UBERON:0005856,6.93e-09,5;UBERON:0005866,6.93e-09,5;UBERON:0005863,6.93e-09,5;UBERON:0007844,6.93e-09,5;UBERON:0011138,6.93e-09,5;UBERON:0001130,6.93e-09,5;UBERON:0001066,6.93e-09,5;UBERON:0001468,6.93e-09,5;UBERON:0002242,9.78e-09,3;UBERON:0003068,9.78e-09,3;UBERON:0002328,9.78e-09,3;UBERON:0004880,9.78e-09,3;UBERON:0004810,9.94e-09,10;UBERON:0007846,1.81e-08,3;UBERON:0000043,1.81e-08,3;UBERON:0007845,1.81e-08,3;UBERON:0006915,4.03e-08,3;UBERON:0007616,4.03e-08,3;UBERON:0002217,4.03e-08,3;UBERON:0002018,4.03e-08,3;UBERON:0002113,1.07e-07,26;UBERON:0003918,1.07e-07,26;UBERON:0011143,1.07e-07,26;UBERON:0005095,1.07e-07,26;UBERON:0007687,1.07e-07,26 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0,2.53299878168311,0.631719873426831,0.783556884599516,0,0,0,0,2.72285976512103,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,1.00267582127178,2.02785126545153,3.1811437882044,0.486634870302636,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597794722207204,0.587172493218824,0.809364721840658,0.842704840213491,0,0,0,0,0,9.10161361938026,2.15585442544872,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,1.54584324027377,2.04728541964749,1.85653965465393,2.63079913935236,0,0,0,0,0,1.01736355386293,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36613600079688,2.36018566109342,0.964044119533928,1.21323370005633,1.30727666455444,2.37270619111097,1.21348177344148,1.17732879075208,0.769494313892781,0,0,0,0,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0.904760751704678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507983154337352,1.90994212779139,0,0,0.411309970813294,0.600686115687835,1.14330573052231,0,0,0,0,0,0.845302752556,0,0,4.62973273671856,0,2.93064396917709,0,0,3.29296134712308,0.65147236858747,0,3.16780749173372,0,0,0,0,0,0,0,0,2.85273810081437,0.289562613335158,2.67119219315498,0.537182889719687,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,3.0672872929785,5.00170521059677,1.62759014219841,0,0,0,0,0.300946099727719,2.27407504055985,2.0694614258501,3.98535359121262,0,0.434418072340414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616838775210622,0.532685175939381,0.574890092096664,0,0.232420756919918,0.120859449591622,0.200506470303285,0,0,0,0,0.451199612907412,0.924184045252977,2.35304930753057,5.84556898613043,0.73886140225013,0,0,0.215915916102139,0,3.25135725052623,3.01013864312912,1.01950509218015,0.831076008928724,1.11937377361089,0,0,0,0,0,0,0.640986253728404,0.495056999523528,0.574265537996172,0,0,1.45006077438183,0,0.15350367472613,0.413509717453592,2.79292636657511,2.32026710262766,0.340906509664404,2.04773681987496,0,0,0,0,0,0,0,0.924100740528266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,1.01455188481352,0.92947049429925,0.845086807596724,2.15117028306077,0.785992328104969,1.426684205925,0,1.26664581178598,1.31717957183961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28188885352968,1.92495971052672,0.245040215981032,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0.37428108081644,0.439524537815682,0.728163130497081,0,1.42068073403207,0,0,0,0,0,0,0,4.64475897881586,0.597743964753209,0,1.0077309914171,0,0,0,0,0,0,0.0986434056369336,0,2.22273980289274,0,0,0,0,6.38457999972229,0,0,0,0.472775363535873,0,0.583209226766509,0.347249989866585,0,0,0,0,0,0,1.63407695278485,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0.284609546029793,1.38674673013139,0,0,0,0.698906672968121,0.171986032471617,0.387025325156341,1.0232504392066,0.574808199372465,0,2.20640316728751,0,0,0.19871461170299,0,2.73771935828724,0,0,0.19980960958213,1.72908500584927,1.25990255782507,0,0,0,0,0.135904206073614,0,0.611989305817931,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0.590564889088493,0,0,0,0,0,0,0,0,0,0.335434687599266,0.630445658393585,2.46536564234491,0,0,0,0,0,0.25426853765475,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0.138348634936231,0,0.454947352624943,0,0,0,1.30428925749743,0.447764408660622,0,0.554805861502613,0.189403005275089,0.754703705257725,4.44905610798268,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0.686791410365586,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0.706756583783524,0,0,0,0,0.911579868532147,0,0,0,0,0,0.491545817507439,0.633936370075881,0,0,0,0,0.368211900503681,0,0.622077260032973,0,0.107824811396682,0,0.327628914576042,0.509197589862076,0.850299680406731,0.743614585554013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0.353909170043221,0,0.115525666150338,1.1441462864015,0,1.98916222116275,0.225630985047772,0.20170506870352,0,0,0,0.295712172434091,0,0,0,0,0,0,0.992422356778588,0.527613733078862,0.127762427639595,0,0,0,0,0,0,0,0,0,0.590969204419841,0,0.156986185701028,0,0,0,1.51149313853035,0,0,0,1.74362138052188,1.91244099532837,0,0,0,0,0,0.354996002191696,0.255640214277473,0,0.22910686854405,0,0,0,1.76670420507437,0,0.647428837187895,0.615976841137482,5.799072156691,0,0.467878926924211,0.198950775161368,0.475680363110274,0,0.219881033490858,0.150962843566674,0,0,0,0,2.12108892391463,0,0,0.8453114551668,1.0195626881269,0,0,0,0.535661815816973,0,0,0,0,0,6.31086248772738,0,0,0,5.95192029066802,1.38652688589425,2.16313281061895,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366724332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| ||
|short_description=p7@HOXC10 | |short_description=p7@HOXC10 | ||
}} | }} |
Latest revision as of 04:28, 19 September 2015
Short description: | p7@HOXC10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_HOXC10_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENST00000303460_5end |
EntrezGene: | HOXC10 |
HGNC: | 5122 |
UniProt: | Q9NYD6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.66e-16 | 9 |
carbohydrate secreting cell | 1.66e-16 | 9 |
chondroblast | 3.29e-10 | 6 |
chondrocyte | 3.29e-10 | 6 |
stromal cell | 3.74e-10 | 28 |
extracellular matrix secreting cell | 2.57e-09 | 15 |
nucleus pulposus cell of intervertebral disc | 9.78e-09 | 3 |
kidney tubule cell | 9.94e-09 | 10 |
nephron tubule epithelial cell | 9.94e-09 | 10 |
fibrocyte | 1.81e-08 | 3 |
tendon cell | 1.81e-08 | 3 |
synovial cell | 4.03e-08 | 3 |
cell of skeletal muscle | 4.98e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
articulation | 3.33e-15 | 8 |
skeletal joint | 3.33e-15 | 8 |
articular system | 3.33e-15 | 8 |
larynx | 2.36e-12 | 9 |
intervertebral cartilage | 6.93e-09 | 5 |
symphysis | 6.93e-09 | 5 |
nonsynovial joint | 6.93e-09 | 5 |
fibrous joint | 6.93e-09 | 5 |
cartilaginous joint | 6.93e-09 | 5 |
developing mesenchymal condensation | 6.93e-09 | 5 |
pre-cartilage condensation | 6.93e-09 | 5 |
cartilaginous condensation | 6.93e-09 | 5 |
cartilage element | 6.93e-09 | 5 |
post-cranial axial skeletal system | 6.93e-09 | 5 |
vertebral column | 6.93e-09 | 5 |
intervertebral disk | 6.93e-09 | 5 |
intervertebral joint | 6.93e-09 | 5 |
nucleus pulposus | 9.78e-09 | 3 |
axial mesoderm | 9.78e-09 | 3 |
notochord | 9.78e-09 | 3 |
chordamesoderm | 9.78e-09 | 3 |
nephron tubule epithelium | 9.94e-09 | 10 |
dense regular connective tissue | 1.81e-08 | 3 |
tendon | 1.81e-08 | 3 |
regular connective tissue | 1.81e-08 | 3 |
stratified squamous epithelium | 4.03e-08 | 3 |
layer of synovial tissue | 4.03e-08 | 3 |
synovial joint | 4.03e-08 | 3 |
synovial membrane of synovial joint | 4.03e-08 | 3 |
kidney | 1.07e-07 | 26 |
kidney mesenchyme | 1.07e-07 | 26 |
upper urinary tract | 1.07e-07 | 26 |
kidney rudiment | 1.07e-07 | 26 |
kidney field | 1.07e-07 | 26 |