FFCP PHASE1:Hg19::chr11:62344767..62344782,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64852 | |EntrezGene=64852 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26184 | |HGNC=26184 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_uc001ntp.1_5end | |association_with_transcript=-4bp_to_uc001ntp.1_5end | ||
|cluster_id=chr11:62344767..62344782,- | |||
|coexpression_cluster_id=C166 | |coexpression_cluster_id=C166 | ||
|description=CAGE_peak_3_at_TUT1_5end | |description=CAGE_peak_3_at_TUT1_5end | ||
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|ontology_enrichment_celltype=CL:0002139!1.66e-46!24;CL:0000115!1.75e-45!35;CL:0002078!2.57e-34!44;CL:0000071!1.14e-33!18;CL:0002546!1.14e-33!18;CL:0000213!1.81e-24!57;CL:0000215!1.81e-24!57;CL:1000413!1.34e-19!9;CL:0005020!2.31e-14!6;CL:0002138!2.31e-14!6;CL:0005022!2.31e-14!6;CL:0002544!1.25e-13!6;CL:0000222!7.19e-10!119;CL:0002543!1.40e-09!6;CL:0002144!4.81e-08!3;CL:0000076!2.81e-07!62 | |ontology_enrichment_celltype=CL:0002139!1.66e-46!24;CL:0000115!1.75e-45!35;CL:0002078!2.57e-34!44;CL:0000071!1.14e-33!18;CL:0002546!1.14e-33!18;CL:0000213!1.81e-24!57;CL:0000215!1.81e-24!57;CL:1000413!1.34e-19!9;CL:0005020!2.31e-14!6;CL:0002138!2.31e-14!6;CL:0005022!2.31e-14!6;CL:0002544!1.25e-13!6;CL:0000222!7.19e-10!119;CL:0002543!1.40e-09!6;CL:0002144!4.81e-08!3;CL:0000076!2.81e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0002139;8.49e-60;24!CL:0000115;2.26e-56;36!CL:0000071;3.14e-37;18!CL:0002078;2.52e-34;45!CL:0002138;1.91e-25;6!CL:0000213;5.25e-23;58!CL:0000215;5.25e-23;58!CL:0002144;1.76e-18;3!CL:1000413;3.04e-16;9!CL:0002545;5.59e-13;2!CL:0002262;8.51e-13;2!CL:1000398;8.51e-13;2!CL:0002188;1.61e-11;5!CL:0000235;8.05e-10;6!CL:0000840;1.37e-09;5!CL:0002544;2.00e-09;6!CL:0002543;3.56e-09;6!CL:1000746;2.33e-08;7!CL:1000612;2.33e-08;7 | |ontology_enrichment_celltype_v019=CL:0002139;8.49e-60;24!CL:0000115;2.26e-56;36!CL:0000071;3.14e-37;18!CL:0002078;2.52e-34;45!CL:0002138;1.91e-25;6!CL:0000213;5.25e-23;58!CL:0000215;5.25e-23;58!CL:0002144;1.76e-18;3!CL:1000413;3.04e-16;9!CL:0002545;5.59e-13;2!CL:0002262;8.51e-13;2!CL:1000398;8.51e-13;2!CL:0002188;1.61e-11;5!CL:0000235;8.05e-10;6!CL:0000840;1.37e-09;5!CL:0002544;2.00e-09;6!CL:0002543;3.56e-09;6!CL:1000746;2.33e-08;7!CL:1000612;2.33e-08;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.50e-68,36;CL:0002139,6.50e-60,24;CL:0002078,8.54e-54,45;CL:0000213,9.31e-41,58;CL:0000215,9.31e-41,58;CL:0000071,1.78e-37,18;CL:0002546,1.78e-37,18;CL:0005020,3.00e-25,6;CL:0002138,3.00e-25,6;CL:0005022,3.00e-25,6;CL:0002144,1.31e-18,3;CL:0000222,3.08e-17,121;CL:1000413,2.77e-16,9;CL:0002545,3.67e-13,2;CL:0002262,7.13e-13,2;CL:1000398,7.13e-13,2;CL:0002188,1.99e-11,5;CL:0000235,7.83e-10,6;CL:0002544,1.41e-09,6;CL:0000840,1.54e-09,5;CL:0001029,1.54e-09,5;CL:0002543,2.83e-09,6;CL:0000076,2.93e-09,63;CL:1000746,2.71e-08,7;CL:1000612,2.71e-08,7;CL:0002321,7.99e-07,250;CL:0000066,8.85e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002546;3.14e-37;18!CL:0005022;1.91e-25;6!CL:0000222;3.14e-08;121 | |ontology_enrichment_development_v019=CL:0002546;3.14e-37;18!CL:0005022;1.91e-25;6!CL:0000222;3.14e-08;121 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;3.14e-37;18!UBERON:0001986;3.14e-37;18!UBERON:0004852;3.14e-37;18!UBERON:0000487;4.27e-30;22!UBERON:0006914;3.05e-26;25!UBERON:0001473;4.80e-19;8!UBERON:0004536;4.80e-19;8!UBERON:0006558;4.80e-19;8!UBERON:0010523;1.76e-18;3!UBERON:0001915;1.76e-18;3!UBERON:0001982;1.76e-18;3!UBERON:0000490;8.45e-18;33!UBERON:0000055;1.38e-17;65!UBERON:0003915;3.04e-16;9!UBERON:0004700;3.04e-16;9!UBERON:0001917;3.04e-16;9!UBERON:0002465;3.38e-15;10!UBERON:0005800;5.59e-13;2!UBERON:0001515;5.59e-13;2!UBERON:0001281;8.51e-13;2!UBERON:0003497;8.51e-13;2!UBERON:0003909;8.51e-13;2!UBERON:0003835;8.51e-13;2!UBERON:0002049;8.39e-12;75!UBERON:0007798;8.39e-12;75!UBERON:0007500;1.51e-10;56!UBERON:0001981;1.51e-10;56!UBERON:0004537;1.51e-10;56!UBERON:0000353;7.91e-10;15!UBERON:0003914;4.15e-09;74!UBERON:0001280;8.02e-09;3!UBERON:0004647;8.02e-09;3!UBERON:0000074;2.33e-08;7!UBERON:0001229;2.33e-08;7!UBERON:0000996;4.60e-07;1!UBERON:0000025;5.07e-07;93 | |ontology_enrichment_uberon_v019=UBERON:0004638;3.14e-37;18!UBERON:0001986;3.14e-37;18!UBERON:0004852;3.14e-37;18!UBERON:0000487;4.27e-30;22!UBERON:0006914;3.05e-26;25!UBERON:0001473;4.80e-19;8!UBERON:0004536;4.80e-19;8!UBERON:0006558;4.80e-19;8!UBERON:0010523;1.76e-18;3!UBERON:0001915;1.76e-18;3!UBERON:0001982;1.76e-18;3!UBERON:0000490;8.45e-18;33!UBERON:0000055;1.38e-17;65!UBERON:0003915;3.04e-16;9!UBERON:0004700;3.04e-16;9!UBERON:0001917;3.04e-16;9!UBERON:0002465;3.38e-15;10!UBERON:0005800;5.59e-13;2!UBERON:0001515;5.59e-13;2!UBERON:0001281;8.51e-13;2!UBERON:0003497;8.51e-13;2!UBERON:0003909;8.51e-13;2!UBERON:0003835;8.51e-13;2!UBERON:0002049;8.39e-12;75!UBERON:0007798;8.39e-12;75!UBERON:0007500;1.51e-10;56!UBERON:0001981;1.51e-10;56!UBERON:0004537;1.51e-10;56!UBERON:0000353;7.91e-10;15!UBERON:0003914;4.15e-09;74!UBERON:0001280;8.02e-09;3!UBERON:0004647;8.02e-09;3!UBERON:0000074;2.33e-08;7!UBERON:0001229;2.33e-08;7!UBERON:0000996;4.60e-07;1!UBERON:0000025;5.07e-07;93 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.78e-37,18;UBERON:0001986,1.78e-37,18;UBERON:0004852,1.78e-37,18;UBERON:0000487,2.70e-30,22;UBERON:0006914,2.04e-26,25;UBERON:0000055,1.90e-24,68;UBERON:0002049,7.98e-21,78;UBERON:0007798,7.98e-21,78;UBERON:0001473,6.72e-19,8;UBERON:0004536,6.72e-19,8;UBERON:0006558,6.72e-19,8;UBERON:0010523,1.31e-18,3;UBERON:0001915,1.31e-18,3;UBERON:0001982,1.31e-18,3;UBERON:0003915,2.77e-16,9;UBERON:0004700,2.77e-16,9;UBERON:0001917,2.77e-16,9;UBERON:0002465,4.42e-15,10;UBERON:0007500,2.96e-14,59;UBERON:0001981,2.96e-14,59;UBERON:0004537,2.96e-14,59;UBERON:0006965,2.96e-14,59;UBERON:0004535,7.99e-14,109;UBERON:0001009,2.37e-13,112;UBERON:0005800,3.67e-13,2;UBERON:0001515,3.67e-13,2;UBERON:0001281,7.13e-13,2;UBERON:0003497,7.13e-13,2;UBERON:0003909,7.13e-13,2;UBERON:0003835,7.13e-13,2;UBERON:0003914,5.66e-11,117;UBERON:0000353,8.38e-10,15;UBERON:0003081,1.64e-09,203;UBERON:0004872,2.13e-09,83;UBERON:0001280,7.13e-09,3;UBERON:0004647,7.13e-09,3;UBERON:0005171,7.13e-09,3;UBERON:0010532,2.71e-08,7;UBERON:0000074,2.71e-08,7;UBERON:0001229,2.71e-08,7;UBERON:0001230,2.71e-08,7;UBERON:0003220,2.71e-08,7;UBERON:0005749,2.71e-08,7;UBERON:0004199,2.71e-08,7;UBERON:0004209,2.71e-08,7;UBERON:0004198,2.71e-08,7;UBERON:0004111,2.93e-08,240;UBERON:0000058,1.10e-07,19;UBERON:0005103,2.61e-07,8;UBERON:0000083,2.61e-07,8;UBERON:0009201,2.61e-07,8;UBERON:0006553,2.61e-07,8;UBERON:0003074,2.61e-07,8;UBERON:0003060,2.61e-07,8;UBERON:0000996,2.84e-07,1 | |||
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|short_description=p3@TUT1 | |short_description=p3@TUT1 | ||
}} | }} |
Latest revision as of 19:51, 18 September 2015
Short description: | p3@TUT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TUT1_5end |
Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
Association with transcript: | -4bp_to_uc001ntp.1_5end |
EntrezGene: | TUT1 |
HGNC: | 26184 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.50e-68 | 36 |
endothelial cell of vascular tree | 6.50e-60 | 24 |
meso-epithelial cell | 8.54e-54 | 45 |
lining cell | 9.31e-41 | 58 |
barrier cell | 9.31e-41 | 58 |
blood vessel endothelial cell | 1.78e-37 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.78e-37 | 18 |
lymphangioblast | 3.00e-25 | 6 |
endothelial cell of lymphatic vessel | 3.00e-25 | 6 |
vascular lymphangioblast | 3.00e-25 | 6 |
capillary endothelial cell | 1.31e-18 | 3 |
mesodermal cell | 3.08e-17 | 121 |
endothelial cell of artery | 2.77e-16 | 9 |
thoracic aorta endothelial cell | 3.67e-13 | 2 |
endothelial cell of sinusoid | 7.13e-13 | 2 |
endothelial cell of hepatic sinusoid | 7.13e-13 | 2 |
glomerular endothelial cell | 1.99e-11 | 5 |
macrophage | 7.83e-10 | 6 |
aortic endothelial cell | 1.41e-09 | 6 |
immature conventional dendritic cell | 1.54e-09 | 5 |
common dendritic progenitor | 1.54e-09 | 5 |
vein endothelial cell | 2.83e-09 | 6 |
squamous epithelial cell | 2.93e-09 | 63 |
glomerular cell | 2.71e-08 | 7 |
kidney corpuscule cell | 2.71e-08 | 7 |
embryonic cell | 7.99e-07 | 250 |
epithelial cell | 8.85e-07 | 253 |