FFCP PHASE1:Hg19::chr19:56813393..56813410,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:56813393..56813410,+ | |||
|description=CAGE_peak_at_chr19:56813393..56813410,+ | |description=CAGE_peak_at_chr19:56813393..56813410,+ | ||
|id=chr19:56813393..56813410,+ | |id=chr19:56813393..56813410,+ | ||
|ontology_enrichment_celltype=CL:0000115!4.54e-19!35;CL:0002139!7.28e-16!24;CL:0000037!2.25e-13!172;CL:0000566!2.25e-13!172;CL:0002078!2.69e-13!44;CL:0000988!2.70e-12!182;CL:0002032!3.86e-12!165;CL:0000837!3.86e-12!165;CL:0000763!1.29e-11!112;CL:0000049!1.29e-11!112;CL:0000071!3.18e-10!18;CL:0002546!3.18e-10!18;CL:0000213!2.21e-08!57;CL:0000215!2.21e-08!57;CL:0000625!5.03e-08!11;CL:0002274!7.11e-08!5;CL:0000457!7.11e-08!5;CL:0002191!7.11e-08!5;CL:0000097!7.11e-08!5;CL:0000831!7.11e-08!5;CL:0002028!7.11e-08!5;CL:0005020!1.21e-07!6;CL:0002138!1.21e-07!6;CL:0005022!1.21e-07!6 | |ontology_enrichment_celltype=CL:0000115!4.54e-19!35;CL:0002139!7.28e-16!24;CL:0000037!2.25e-13!172;CL:0000566!2.25e-13!172;CL:0002078!2.69e-13!44;CL:0000988!2.70e-12!182;CL:0002032!3.86e-12!165;CL:0000837!3.86e-12!165;CL:0000763!1.29e-11!112;CL:0000049!1.29e-11!112;CL:0000071!3.18e-10!18;CL:0002546!3.18e-10!18;CL:0000213!2.21e-08!57;CL:0000215!2.21e-08!57;CL:0000625!5.03e-08!11;CL:0002274!7.11e-08!5;CL:0000457!7.11e-08!5;CL:0002191!7.11e-08!5;CL:0000097!7.11e-08!5;CL:0000831!7.11e-08!5;CL:0002028!7.11e-08!5;CL:0005020!1.21e-07!6;CL:0002138!1.21e-07!6;CL:0005022!1.21e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000097;3.78e-16;5!CL:0002188;3.69e-15;5!CL:0000115;6.53e-11;36!CL:1000746;7.38e-11;7!CL:1000612;7.38e-11;7!CL:0000625;5.59e-10;11!CL:0000163;5.43e-09;9!CL:0000791;2.16e-08;18!CL:0000789;2.16e-08;18!CL:0002419;2.16e-08;18!CL:0000084;5.75e-08;25!CL:0002138;2.14e-07;6!CL:0002144;3.76e-07;3!CL:0002078;5.15e-07;45 | |ontology_enrichment_celltype_v019=CL:0000097;3.78e-16;5!CL:0002188;3.69e-15;5!CL:0000115;6.53e-11;36!CL:1000746;7.38e-11;7!CL:1000612;7.38e-11;7!CL:0000625;5.59e-10;11!CL:0000163;5.43e-09;9!CL:0000791;2.16e-08;18!CL:0000789;2.16e-08;18!CL:0002419;2.16e-08;18!CL:0000084;5.75e-08;25!CL:0002138;2.14e-07;6!CL:0002144;3.76e-07;3!CL:0002078;5.15e-07;45 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.66e-16,5;CL:0002028,3.66e-16,5;CL:0002188,4.15e-15,5;CL:0000115,2.65e-13,36;CL:1000746,8.01e-11,7;CL:1000612,8.01e-11,7;CL:0002078,3.30e-10,45;CL:0000625,4.01e-10,11;CL:0000163,5.34e-09,9;CL:0000791,1.89e-08,18;CL:0000789,1.89e-08,18;CL:0002420,1.89e-08,18;CL:0002419,1.89e-08,18;CL:0000790,1.89e-08,18;CL:0000084,5.20e-08,25;CL:0000827,5.20e-08,25;CL:0005020,1.59e-07,6;CL:0002138,1.59e-07,6;CL:0005022,1.59e-07,6;CL:0000213,1.89e-07,58;CL:0000215,1.89e-07,58;CL:0000037,2.38e-07,168;CL:0002144,3.54e-07,3;CL:0002032,5.95e-07,161;CL:0000837,5.95e-07,161;CL:0000988,9.41e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;2.16e-08;18!CL:0005022;2.14e-07;6 | |ontology_enrichment_development_v019=CL:0000790;2.16e-08;18!CL:0005022;2.14e-07;6 | ||
|ontology_enrichment_disease=DOID:1240!1.42e-15!39;DOID:8692!2.52e-15!31;DOID:2531!4.87e-11!51;DOID:0060083!4.87e-11!51;DOID:1036!4.41e-07!8 | |ontology_enrichment_disease=DOID:1240!1.42e-15!39;DOID:8692!2.52e-15!31;DOID:2531!4.87e-11!51;DOID:0060083!4.87e-11!51;DOID:1036!4.41e-07!8 | ||
|ontology_enrichment_disease_v019=DOID:8692;4.83e-08;31 | |ontology_enrichment_disease_v019=DOID:8692;4.83e-08;31 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,1.53e-08,31;DOID:1240,2.75e-08,39;DOID:2531,2.15e-07,51;DOID:0060083,2.15e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0001986!3.18e-10!18;UBERON:0004638!3.18e-10!18;UBERON:0004852!3.18e-10!18;UBERON:0000487!8.80e-09!22;UBERON:0006914!3.16e-07!25;UBERON:0002465!7.22e-07!10 | |ontology_enrichment_uberon=UBERON:0001986!3.18e-10!18;UBERON:0004638!3.18e-10!18;UBERON:0004852!3.18e-10!18;UBERON:0000487!8.80e-09!22;UBERON:0006914!3.16e-07!25;UBERON:0002465!7.22e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0000074;7.38e-11;7!UBERON:0001229;7.38e-11;7!UBERON:0000353;1.71e-07;15!UBERON:0010523;3.76e-07;3!UBERON:0001915;3.76e-07;3!UBERON:0001982;3.76e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0000074;7.38e-11;7!UBERON:0001229;7.38e-11;7!UBERON:0000353;1.71e-07;15!UBERON:0010523;3.76e-07;3!UBERON:0001915;3.76e-07;3!UBERON:0001982;3.76e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,8.01e-11,7;UBERON:0000074,8.01e-11,7;UBERON:0001229,8.01e-11,7;UBERON:0001230,8.01e-11,7;UBERON:0003220,8.01e-11,7;UBERON:0005749,8.01e-11,7;UBERON:0004199,8.01e-11,7;UBERON:0004209,8.01e-11,7;UBERON:0004198,8.01e-11,7;UBERON:0005103,1.77e-09,8;UBERON:0000083,1.77e-09,8;UBERON:0009201,1.77e-09,8;UBERON:0006553,1.77e-09,8;UBERON:0003074,1.77e-09,8;UBERON:0003060,1.77e-09,8;UBERON:0000080,1.97e-08,9;UBERON:0002120,1.97e-08,9;UBERON:0004875,1.97e-08,9;UBERON:0005721,1.97e-08,9;UBERON:0005754,1.97e-08,9;UBERON:0007297,1.97e-08,9;UBERON:0000353,1.79e-07,15;UBERON:0010523,3.54e-07,3;UBERON:0001915,3.54e-07,3;UBERON:0001982,3.54e-07,3;UBERON:0004876,6.60e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0.293600439334847,1.10799081706375,0,0,0,0.32389366601898,0.257575567634187,0.145398238779565,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0.426224750532694,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0.211255286311942,0.425208599930087,0,0.336985893439485,0,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,1.83905144929746,0,0,0,1.78256731016278,0.589211814949674,1.10766947291811,0.541607727530031,1.5370958367081,1.04047478047903,0.986627427622057,1.38175008892924,2.02862160014537,0.14828656316206,0,0,1.24640276967323,1.14966148080576,0.34362744548263,0.506039384039006,1.27426165729639,1.30216690771284,1.90090408889675,0.301150238155546,0.76791966692651,0,1.65744076430812,1.64225599384209,0.201606743224732,0.267440195783507,0,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0,0,0,0.261958150995425,0.364295288292542,0.370784442784429,0.324547393654683,0,0.26591592103773,0,0,0,0.39752481473341,0,0.347140501607594,0,0.838998872419812,0.275118041940067,0.417989933073621,0.516833518338658,0.35576626268671,0.33472061276467,1.61131726843659,3.04108842287405,0.488124115096339,0.735326160691737,0.81014194788176,0.17859945656816,0,0.225222960966644,1.53316637465883,0,0.916008719652036,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0,1.7658523976586,0.122988438543114,0,0,1.1240175325762,0.201057944823262,0,0,0,0,0,0,2.88732895522148,1.85194205030644,1.52203321787679,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,3.34584049250259,12.2323588169056,13.4031556677774,14.2653949771809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.320182673410333,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,3.4120015221269,1.70093705276516,1.0795795805107,3.08454505380579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0.764637207142375,0,0,0,0,0,0.79312517629427,0,0,0,0,0.144269212976445,0,0.956557636372934,0.399158742865633,2.10655907145603,7.4085753953359,0.324621940274555,0.280797178113459,0.228234679033192,0,15.038068625404,0,0.1605880751037,0,1.27753871307098,18.5492886168113,0.614481528616916,0.447352215784832,0.333698283423817,1.9538809540204,0,0,0.270455678475983,2.33150377598474,0,0,0.586032717087576,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,4.95727842751532,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0.23056390438806,0,0,0.638002319463839,0,0.533034776018635,3.06579894587209,0.31396051279005,1.16348177330109,0.676786981851542,0.980312671588698,0.503464760927528,0,0.635746315921515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0.77380195455795,0,0,0.157611414598396,0.209818352539992,0,0,0,0,0.662091970365432,0,0,0,0,0,0.492555124496034,0,0,0,0,0,0,0,0,0.854299300541557,0.943225830597996,0.414239055347196,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.327130788511688,0,0,0,0,0.106691729694141,0,0,0,0.139879507719444,0,0,0,1.10086159299127,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.655087670040387,0,0,0.781078098613847,0,0,0,0,0,0.703484977438482,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,8.45391923973372,0.154348316215889,0.655678681511872,0,0,0.235676547101626,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0.12729431655633,0.202117188958219,0.217716747896961,0.342233301085281,0.0673520530145875,0.143444410785353,0.332660356546013,0,0,0,0,0,0.366724332548599,0,0,0.805095174364105,0 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| ||
|short_description=p@chr19:56813393..56813410,+ | |short_description=p@chr19:56813393..56813410,+ | ||
}} | }} |
Latest revision as of 17:39, 27 July 2015
Short description: | p@chr19:56813393..56813410, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:56813393..56813410, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.66e-16 | 5 |
basophil mast progenitor cell | 3.66e-16 | 5 |
glomerular endothelial cell | 4.15e-15 | 5 |
endothelial cell | 2.65e-13 | 36 |
glomerular cell | 8.01e-11 | 7 |
kidney corpuscule cell | 8.01e-11 | 7 |
meso-epithelial cell | 3.30e-10 | 45 |
CD8-positive, alpha-beta T cell | 4.01e-10 | 11 |
endocrine cell | 5.34e-09 | 9 |
mature alpha-beta T cell | 1.89e-08 | 18 |
alpha-beta T cell | 1.89e-08 | 18 |
immature T cell | 1.89e-08 | 18 |
mature T cell | 1.89e-08 | 18 |
immature alpha-beta T cell | 1.89e-08 | 18 |
T cell | 5.20e-08 | 25 |
pro-T cell | 5.20e-08 | 25 |
lymphangioblast | 1.59e-07 | 6 |
endothelial cell of lymphatic vessel | 1.59e-07 | 6 |
vascular lymphangioblast | 1.59e-07 | 6 |
lining cell | 1.89e-07 | 58 |
barrier cell | 1.89e-07 | 58 |
hematopoietic stem cell | 2.38e-07 | 168 |
capillary endothelial cell | 3.54e-07 | 3 |
hematopoietic oligopotent progenitor cell | 5.95e-07 | 161 |
hematopoietic multipotent progenitor cell | 5.95e-07 | 161 |
hematopoietic cell | 9.41e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
primitive nephron | 8.01e-11 | 7 |
renal glomerulus | 8.01e-11 | 7 |
renal corpuscle | 8.01e-11 | 7 |
glomerular capsule | 8.01e-11 | 7 |
metanephric mesenchyme | 8.01e-11 | 7 |
glomerular tuft | 8.01e-11 | 7 |
S-shaped body | 8.01e-11 | 7 |
renal vesicle | 8.01e-11 | 7 |
comma-shaped body | 8.01e-11 | 7 |
mesonephric epithelium | 1.77e-09 | 8 |
mesonephric tubule | 1.77e-09 | 8 |
nephric duct | 1.77e-09 | 8 |
renal duct | 1.77e-09 | 8 |
mesonephric duct | 1.77e-09 | 8 |
pronephric duct | 1.77e-09 | 8 |
mesonephros | 1.97e-08 | 9 |
pronephros | 1.97e-08 | 9 |
nephrogenic cord | 1.97e-08 | 9 |
pronephric mesoderm | 1.97e-08 | 9 |
rostral part of nephrogenic cord | 1.97e-08 | 9 |
presumptive pronephric mesoderm | 1.97e-08 | 9 |
parenchyma | 1.79e-07 | 15 |
microcirculatory vessel | 3.54e-07 | 3 |
endothelium of capillary | 3.54e-07 | 3 |
capillary | 3.54e-07 | 3 |
urogenital ridge | 6.60e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.53e-08 | 31 |
leukemia | 2.75e-08 | 39 |
hematologic cancer | 2.15e-07 | 51 |
immune system cancer | 2.15e-07 | 51 |