FFCP PHASE1:Hg19::chr12:53342625..53342694,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3875 | |EntrezGene=3875 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6430 | |HGNC=6430 | ||
|TSSclassifier=strong | |||
|UniProt=P05783,F8VZY9 | |UniProt=P05783,F8VZY9 | ||
|association_with_transcript=0bp_to_ENST00000388837,ENST00000550600,NM_199187,uc001sbe.2,uc009zmn.1_5end | |association_with_transcript=0bp_to_ENST00000388837,ENST00000550600,NM_199187,uc001sbe.2,uc009zmn.1_5end | ||
|cluster_id=chr12:53342625..53342694,+ | |||
|description=CAGE_peak_2_at_KRT18_5end | |description=CAGE_peak_2_at_KRT18_5end | ||
|id=chr12:53342625..53342694,+ | |id=chr12:53342625..53342694,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.34e-43!254;CL:0000223!9.93e-12!59;CL:0000076!3.36e-11!62;CL:0002321!3.65e-11!248;CL:0002076!5.92e-11!43;CL:0000220!1.31e-10!246;CL:0000077!2.87e-07!19;CL:1000497!8.31e-07!18;CL:0002518!8.31e-07!18 | |ontology_enrichment_celltype=CL:0000066!2.34e-43!254;CL:0000223!9.93e-12!59;CL:0000076!3.36e-11!62;CL:0002321!3.65e-11!248;CL:0002076!5.92e-11!43;CL:0000220!1.31e-10!246;CL:0000077!2.87e-07!19;CL:1000497!8.31e-07!18;CL:0002518!8.31e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002076;6.51e-09;42!CL:1000497;7.39e-08;17!CL:0002518;7.39e-08;17!CL:0000077;2.24e-07;19!CL:1000449;5.59e-07;15 | |ontology_enrichment_celltype_v019=CL:0002076;6.51e-09;42!CL:1000497;7.39e-08;17!CL:0002518;7.39e-08;17!CL:0000077;2.24e-07;19!CL:1000449;5.59e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.13e-45,253;CL:0000223,1.48e-12,58;CL:0002076,2.12e-12,42;CL:0002321,5.74e-12,250;CL:0000076,1.91e-10,63;CL:1000497,8.03e-08,17;CL:0002518,8.03e-08,17;CL:0000077,1.30e-07,19;CL:1000449,6.50e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000223;7.34e-07;58 | |ontology_enrichment_development_v019=CL:0000223;7.34e-07;58 | ||
|ontology_enrichment_disease=DOID:305!5.39e-23!106;DOID:0050687!4.71e-20!143;DOID:162!4.97e-13!235;DOID:14566!4.24e-12!239 | |ontology_enrichment_disease=DOID:305!5.39e-23!106;DOID:0050687!4.71e-20!143;DOID:162!4.97e-13!235;DOID:14566!4.24e-12!239 | ||
|ontology_enrichment_disease_v019=DOID:305;5.38e-08;106 | |ontology_enrichment_disease_v019=DOID:305;5.38e-08;106 | ||
|ontology_enrichment_disease_v019_2=DOID:305,3.63e-23,106;DOID:0050687,1.01e-19,143;DOID:162,3.96e-14,235;DOID:14566,2.97e-13,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.13e-13!169;UBERON:0000925!3.13e-13!169;UBERON:0006595!3.13e-13!169;UBERON:0004921!5.03e-13!129;UBERON:0004185!5.03e-13!129;UBERON:0001048!5.86e-13!168;UBERON:0000466!9.40e-12!126;UBERON:0005177!3.16e-11!107;UBERON:0001007!6.21e-11!155;UBERON:0001555!6.21e-11!155;UBERON:0007026!6.21e-11!155;UBERON:0001041!1.94e-10!98;UBERON:0006554!3.03e-10!44;UBERON:0000077!5.42e-10!130;UBERON:0000063!5.72e-10!97;UBERON:0009569!1.59e-09!113;UBERON:0001008!1.64e-09!45;UBERON:0003104!1.77e-09!238;UBERON:0009142!1.77e-09!238;UBERON:0000464!2.29e-09!104;UBERON:0002113!5.05e-09!27;UBERON:0003918!5.05e-09!27;UBERON:0005095!5.05e-09!27;UBERON:0007687!5.05e-09!27;UBERON:0005911!5.43e-09!82;UBERON:0003103!7.73e-09!69;UBERON:0000072!1.03e-08!46;UBERON:0008947!1.26e-08!38;UBERON:0003258!1.26e-08!38;UBERON:0005172!1.27e-08!55;UBERON:0005173!1.27e-08!55;UBERON:0000481!1.28e-08!347;UBERON:0000065!2.67e-08!53;UBERON:0001004!5.62e-08!72;UBERON:0000489!1.06e-07!32;UBERON:0002417!1.76e-07!61;UBERON:0000916!1.76e-07!61;UBERON:0000058!4.21e-07!26 | |ontology_enrichment_uberon=UBERON:0004119!3.13e-13!169;UBERON:0000925!3.13e-13!169;UBERON:0006595!3.13e-13!169;UBERON:0004921!5.03e-13!129;UBERON:0004185!5.03e-13!129;UBERON:0001048!5.86e-13!168;UBERON:0000466!9.40e-12!126;UBERON:0005177!3.16e-11!107;UBERON:0001007!6.21e-11!155;UBERON:0001555!6.21e-11!155;UBERON:0007026!6.21e-11!155;UBERON:0001041!1.94e-10!98;UBERON:0006554!3.03e-10!44;UBERON:0000077!5.42e-10!130;UBERON:0000063!5.72e-10!97;UBERON:0009569!1.59e-09!113;UBERON:0001008!1.64e-09!45;UBERON:0003104!1.77e-09!238;UBERON:0009142!1.77e-09!238;UBERON:0000464!2.29e-09!104;UBERON:0002113!5.05e-09!27;UBERON:0003918!5.05e-09!27;UBERON:0005095!5.05e-09!27;UBERON:0007687!5.05e-09!27;UBERON:0005911!5.43e-09!82;UBERON:0003103!7.73e-09!69;UBERON:0000072!1.03e-08!46;UBERON:0008947!1.26e-08!38;UBERON:0003258!1.26e-08!38;UBERON:0005172!1.27e-08!55;UBERON:0005173!1.27e-08!55;UBERON:0000481!1.28e-08!347;UBERON:0000065!2.67e-08!53;UBERON:0001004!5.62e-08!72;UBERON:0000489!1.06e-07!32;UBERON:0002417!1.76e-07!61;UBERON:0000916!1.76e-07!61;UBERON:0000058!4.21e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.32e-11;30!UBERON:0001008;1.32e-11;30!UBERON:0002113;6.49e-11;24!UBERON:0011143;6.49e-11;24!UBERON:0000489;3.78e-09;29!UBERON:0000072;7.14e-08;37!UBERON:0000065;3.98e-07;44!UBERON:0006555;5.59e-07;15!UBERON:0004819;5.59e-07;15!UBERON:0001285;5.59e-07;15!UBERON:0007684;5.59e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0006554;1.32e-11;30!UBERON:0001008;1.32e-11;30!UBERON:0002113;6.49e-11;24!UBERON:0011143;6.49e-11;24!UBERON:0000489;3.78e-09;29!UBERON:0000072;7.14e-08;37!UBERON:0000065;3.98e-07;44!UBERON:0006555;5.59e-07;15!UBERON:0004819;5.59e-07;15!UBERON:0001285;5.59e-07;15!UBERON:0007684;5.59e-07;15 | ||
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| ||
|short_description=p2@KRT18 | |short_description=p2@KRT18 | ||
}} | }} |
Latest revision as of 01:10, 19 September 2015
Short description: | p2@KRT18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KRT18_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000388837, ENST00000550600, NM_199187, uc001sbe.2, uc009zmn.1_5end |
EntrezGene: | KRT18 |
HGNC: | 6430 |
UniProt: | P05783F8VZY9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.13e-45 | 253 |
endodermal cell | 1.48e-12 | 58 |
endo-epithelial cell | 2.12e-12 | 42 |
embryonic cell | 5.74e-12 | 250 |
squamous epithelial cell | 1.91e-10 | 63 |
kidney cell | 8.03e-08 | 17 |
kidney epithelial cell | 8.03e-08 | 17 |
mesothelial cell | 1.30e-07 | 19 |
epithelial cell of nephron | 6.50e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.63e-23 | 106 |
cell type cancer | 1.01e-19 | 143 |
cancer | 3.96e-14 | 235 |
disease of cellular proliferation | 2.97e-13 | 239 |