FFCP PHASE1:Hg19::chr1:86045798..86045809,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:86045798..86045809,+
|short_description=p@chr1:86045798..86045809,+
|description=CAGE_peak_at_chr1:86045798..86045809,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:86045798..86045809,+ | |||
|description=CAGE_peak_at_chr1:86045798..86045809,+ | |||
|id=chr1:86045798..86045809,+ | |||
|ontology_enrichment_celltype=CL:0002620!3.75e-10!23 | |||
|ontology_enrichment_celltype_v019=CL:1000306;1.13e-13;4!CL:0002547;1.13e-13;4!CL:0002188;3.26e-11;5!CL:0000128;1.89e-08;7!CL:0000126;1.89e-08;7!CL:0000127;1.89e-08;7!CL:1000746;2.18e-08;7!CL:1000612;2.18e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,1.00e-13,4;CL:0002547,1.00e-13,4;CL:0002188,3.60e-11,5;CL:0000128,1.89e-08,7;CL:0000126,1.89e-08,7;CL:0000127,1.89e-08,7;CL:0002453,1.89e-08,7;CL:1000746,2.35e-08,7;CL:1000612,2.35e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:193!3.36e-08!29;DOID:120!1.05e-07!27;DOID:17!2.48e-07!5;DOID:450!2.48e-07!5;DOID:66!2.48e-07!5;DOID:423!2.48e-07!5;DOID:0080000!2.48e-07!5;DOID:11722!2.48e-07!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;1.13e-13;4!UBERON:0000415;1.13e-13;4!UBERON:0007240;1.13e-13;4!UBERON:0005742;1.13e-13;4!UBERON:0005734;1.13e-13;4!UBERON:0004664;1.13e-13;4!UBERON:0004663;1.13e-13;4!UBERON:0000947;1.77e-10;21!UBERON:0010191;1.77e-10;21!UBERON:0000074;2.18e-08;7!UBERON:0001229;2.18e-08;7!UBERON:0004573;3.69e-07;33!UBERON:0004571;3.69e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,1.00e-13,4;UBERON:0007240,1.00e-13,4;UBERON:0005742,1.00e-13,4;UBERON:0005734,1.00e-13,4;UBERON:0004664,1.00e-13,4;UBERON:0004663,1.00e-13,4;UBERON:0000947,1.69e-10,21;UBERON:0010191,1.69e-10,21;UBERON:0004797,2.03e-08,7;UBERON:0010532,2.35e-08,7;UBERON:0000074,2.35e-08,7;UBERON:0001229,2.35e-08,7;UBERON:0001230,2.35e-08,7;UBERON:0003220,2.35e-08,7;UBERON:0005749,2.35e-08,7;UBERON:0004199,2.35e-08,7;UBERON:0004209,2.35e-08,7;UBERON:0004198,2.35e-08,7;UBERON:0005103,1.80e-07,8;UBERON:0000083,1.80e-07,8;UBERON:0009201,1.80e-07,8;UBERON:0006553,1.80e-07,8;UBERON:0003074,1.80e-07,8;UBERON:0003060,1.80e-07,8;UBERON:0004573,4.74e-07,33;UBERON:0004571,4.74e-07,33;UBERON:0000080,8.85e-07,9;UBERON:0002120,8.85e-07,9;UBERON:0004875,8.85e-07,9;UBERON:0005721,8.85e-07,9;UBERON:0005754,8.85e-07,9;UBERON:0007297,8.85e-07,9 | |||
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| ||
|short_description=p@chr1:86045798..86045809,+ | |||
}} | }} |
Latest revision as of 10:52, 28 July 2015
Short description: | p@chr1:86045798..86045809, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:86045798..86045809, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 1.00e-13 | 4 |
fibroblast of the aortic adventitia | 1.00e-13 | 4 |
glomerular endothelial cell | 3.60e-11 | 5 |
oligodendrocyte | 1.89e-08 | 7 |
macroglial cell | 1.89e-08 | 7 |
astrocyte | 1.89e-08 | 7 |
oligodendrocyte precursor cell | 1.89e-08 | 7 |
glomerular cell | 2.35e-08 | 7 |
kidney corpuscule cell | 2.35e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
artery wall | 1.00e-13 | 4 |
tunica adventitia of artery | 1.00e-13 | 4 |
adventitia | 1.00e-13 | 4 |
tunica adventitia of blood vessel | 1.00e-13 | 4 |
aorta tunica adventitia | 1.00e-13 | 4 |
aorta wall | 1.00e-13 | 4 |
aorta | 1.69e-10 | 21 |
aortic system | 1.69e-10 | 21 |
blood vessel layer | 2.03e-08 | 7 |
primitive nephron | 2.35e-08 | 7 |
renal glomerulus | 2.35e-08 | 7 |
renal corpuscle | 2.35e-08 | 7 |
glomerular capsule | 2.35e-08 | 7 |
metanephric mesenchyme | 2.35e-08 | 7 |
glomerular tuft | 2.35e-08 | 7 |
S-shaped body | 2.35e-08 | 7 |
renal vesicle | 2.35e-08 | 7 |
comma-shaped body | 2.35e-08 | 7 |
mesonephric epithelium | 1.80e-07 | 8 |
mesonephric tubule | 1.80e-07 | 8 |
nephric duct | 1.80e-07 | 8 |
renal duct | 1.80e-07 | 8 |
mesonephric duct | 1.80e-07 | 8 |
pronephric duct | 1.80e-07 | 8 |
systemic artery | 4.74e-07 | 33 |
systemic arterial system | 4.74e-07 | 33 |
mesonephros | 8.85e-07 | 9 |
pronephros | 8.85e-07 | 9 |
nephrogenic cord | 8.85e-07 | 9 |
pronephric mesoderm | 8.85e-07 | 9 |
rostral part of nephrogenic cord | 8.85e-07 | 9 |
presumptive pronephric mesoderm | 8.85e-07 | 9 |