FFCP PHASE1:Hg19::chr11:2016512..2016519,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=224bp_to_BC106079_5end | |association_with_transcript=224bp_to_BC106079_5end | ||
|cluster_id=chr11:2016512..2016519,- | |||
|coexpression_cluster_id=C227 | |coexpression_cluster_id=C227 | ||
|description=CAGE_peak_10_at_BC106079_5end | |description=CAGE_peak_10_at_BC106079_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000188!1.39e-07!9 | |ontology_enrichment_celltype=CL:0000188!1.39e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000349;5.61e-22;19!CL:0002537;5.02e-13;5!CL:0002541;2.36e-10;3 | |ontology_enrichment_celltype_v019=CL:0000349;5.61e-22;19!CL:0002537;5.02e-13;5!CL:0002541;2.36e-10;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.19e-22,19;CL:0002537,4.54e-13,5;CL:0002541,2.31e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.27e-08;1!UBERON:0010226;7.85e-08;1 | |ontology_enrichment_development_v019=UBERON:0000358;2.27e-08;1!UBERON:0010226;7.85e-08;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1799;2.71e-08;1!DOID:10165;2.71e-08;1!DOID:1798;2.71e-08;1 | |ontology_enrichment_disease_v019=DOID:1799;2.71e-08;1!DOID:10165;2.71e-08;1!DOID:1798;2.71e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:1799,2.71e-08,1;DOID:10165,2.71e-08,1;DOID:1798,2.71e-08,1 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.12e-23,14;UBERON:0000158,4.12e-23,14;UBERON:0000478,1.03e-21,24;UBERON:0000305,9.83e-16,7;UBERON:0005090,1.37e-14,2;UBERON:0001630,1.37e-14,2;UBERON:0004871,8.64e-14,8;UBERON:0000920,2.31e-10,3;UBERON:0003124,1.79e-09,7;UBERON:0002426,1.77e-08,1;UBERON:0003831,1.77e-08,1;UBERON:0003898,1.77e-08,1;UBERON:0004830,1.77e-08,1;UBERON:0003830,1.77e-08,1;UBERON:0005175,1.77e-08,1;UBERON:0001774,1.77e-08,1;UBERON:0001103,1.77e-08,1;UBERON:0010084,1.77e-08,1;UBERON:0007029,5.79e-08,1;UBERON:0002084,7.59e-08,1;UBERON:0002082,7.59e-08,1;UBERON:0010226,7.59e-08,1;UBERON:0005418,8.12e-08,1;UBERON:0001389,8.12e-08,1;UBERON:0000026,8.12e-08,1;UBERON:0008784,8.12e-08,1;UBERON:0006058,8.12e-08,1;UBERON:0003663,8.12e-08,1;UBERON:0004256,8.12e-08,1;UBERON:0004708,8.12e-08,1;UBERON:0002101,8.12e-08,1;UBERON:0004709,8.12e-08,1;UBERON:0002529,8.12e-08,1;UBERON:0010538,8.12e-08,1;UBERON:0003661,8.12e-08,1;UBERON:0010890,8.12e-08,1;UBERON:0002471,8.12e-08,1;UBERON:0001383,8.12e-08,1;UBERON:0004357,8.12e-08,1;UBERON:0004347,8.12e-08,1;UBERON:0005420,8.12e-08,1;UBERON:0005732,8.12e-08,1;UBERON:0010758,8.12e-08,1;UBERON:0010707,8.12e-08,1;UBERON:0000978,8.12e-08,1;UBERON:0002103,8.12e-08,1;UBERON:0001665,8.12e-08,1;UBERON:0003823,8.12e-08,1;UBERON:0000154,8.12e-08,1;UBERON:0010709,8.12e-08,1;UBERON:0005733,8.12e-08,1;UBERON:0005730,8.12e-08,1;UBERON:0001052,1.49e-07,4 | |||
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|short_description=p10@BC106079 | |short_description=p10@BC106079 | ||
}} | }} |
Latest revision as of 20:53, 23 July 2015
Short description: | p10@BC106079 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_BC106079_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 224bp_to_BC106079_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.19e-22 | 19 |
amnion mesenchymal stem cell | 4.54e-13 | 5 |
chorionic membrane mesenchymal stem cell | 2.31e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.71e-08 | 1 |
endocrine pancreas cancer | 2.71e-08 | 1 |
pancreatic endocrine carcinoma | 2.71e-08 | 1 |