FFCP PHASE1:Hg19::chr5:36608318..36608354,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6507 | |EntrezGene=6507 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10941 | |HGNC=10941 | ||
|TSSclassifier=strong | |||
|UniProt=E7EUV6 | |UniProt=E7EUV6 | ||
|association_with_transcript=38bp_to_ENST00000513646_5end | |association_with_transcript=38bp_to_ENST00000513646_5end | ||
|cluster_id=chr5:36608318..36608354,+ | |||
|coexpression_cluster_id=C1961 | |coexpression_cluster_id=C1961 | ||
|description=CAGE_peak_2_at_SLC1A3_5end | |description=CAGE_peak_2_at_SLC1A3_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002605;1.92e-10;3!CL:0002619;2.05e-10;3!CL:0000047;1.24e-08;2 | |ontology_enrichment_celltype_v019=CL:0002605;1.92e-10;3!CL:0002619;2.05e-10;3!CL:0000047;1.24e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.16e-10,3;CL:0002619,2.63e-10,3;CL:0000047,4.21e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.28e-20;82!UBERON:0006215;5.43e-12;3!UBERON:0006241;1.92e-10;3!UBERON:0003057;1.92e-10;3!UBERON:0010122;5.03e-08;2 | |ontology_enrichment_development_v019=UBERON:0006601;9.28e-20;82!UBERON:0006215;5.43e-12;3!UBERON:0006241;1.92e-10;3!UBERON:0003057;1.92e-10;3!UBERON:0010122;5.03e-08;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!4.56e-71!86;UBERON:0001017!2.88e-70!82;UBERON:0001049!5.58e-68!57;UBERON:0005068!5.58e-68!57;UBERON:0006241!5.58e-68!57;UBERON:0007135!5.58e-68!57;UBERON:0003075!6.04e-63!86;UBERON:0007284!6.04e-63!86;UBERON:0000073!1.22e-62!94;UBERON:0001016!1.22e-62!94;UBERON:0000955!1.34e-59!69;UBERON:0006238!1.34e-59!69;UBERON:0002346!2.38e-59!90;UBERON:0002616!5.40e-59!59;UBERON:0002020!4.90e-51!34;UBERON:0003528!4.90e-51!34;UBERON:0001893!1.50e-50!34;UBERON:0002780!2.86e-49!41;UBERON:0001890!2.86e-49!41;UBERON:0006240!2.86e-49!41;UBERON:0002791!6.89e-49!33;UBERON:0003080!7.62e-48!42;UBERON:0001869!2.15e-47!32;UBERON:0003056!9.99e-44!61;UBERON:0000033!1.38e-39!123;UBERON:0000153!2.55e-38!129;UBERON:0007811!2.55e-38!129;UBERON:0004121!2.21e-35!169;UBERON:0000956!2.30e-35!25;UBERON:0000203!2.30e-35!25;UBERON:0000924!4.10e-34!173;UBERON:0006601!4.10e-34!173;UBERON:0007023!1.07e-30!115;UBERON:0002619!1.98e-30!22;UBERON:0001950!7.26e-27!20;UBERON:0003076!1.77e-20!15;UBERON:0003057!1.77e-20!15;UBERON:0002308!4.91e-17!9;UBERON:0000125!4.91e-17!9;UBERON:0002420!7.01e-17!9;UBERON:0007245!7.01e-17!9;UBERON:0010009!7.01e-17!9;UBERON:0010011!7.01e-17!9;UBERON:0000454!7.01e-17!9;UBERON:0004733!1.50e-15!12;UBERON:0002028!1.50e-15!12;UBERON:0007277!1.50e-15!12;UBERON:0004732!3.78e-14!13;UBERON:0000025!5.37e-14!194;UBERON:0009663!2.38e-13!7;UBERON:0000064!3.44e-12!219;UBERON:0002298!7.15e-12!8;UBERON:0000200!1.02e-11!6;UBERON:0000119!2.72e-11!312;UBERON:0000483!4.81e-11!309;UBERON:0000349!1.09e-10!5;UBERON:0002680!2.09e-10!9;UBERON:0001895!2.09e-10!9;UBERON:0010092!2.09e-10!9;UBERON:0002021!9.73e-10!5;UBERON:0000062!4.10e-09!511;UBERON:0004111!4.26e-09!241;UBERON:0000475!4.46e-09!365;UBERON:0000369!7.14e-09!4;UBERON:0002435!7.14e-09!4;UBERON:0000204!7.14e-09!4;UBERON:0010082!7.14e-09!4;UBERON:0001871!1.11e-08!7;UBERON:0000477!2.48e-08!286;UBERON:0000467!4.84e-08!625;UBERON:0000480!5.47e-08!626;UBERON:0000922!2.24e-07!612;UBERON:0000923!2.65e-07!604;UBERON:0005291!2.65e-07!604;UBERON:0006598!2.65e-07!604;UBERON:0002532!2.65e-07!604;UBERON:0000468!2.96e-07!659;UBERON:0002050!2.98e-07!605;UBERON:0005423!2.98e-07!605;UBERON:0001896!4.42e-07!3;UBERON:0005290!4.42e-07!3;UBERON:0010096!4.42e-07!3;UBERON:0005383!5.17e-07!3;UBERON:0005382!5.17e-07!3;UBERON:0000988!6.92e-07!3;UBERON:0006331!8.23e-07!3 | |ontology_enrichment_uberon=UBERON:0005743!4.56e-71!86;UBERON:0001017!2.88e-70!82;UBERON:0001049!5.58e-68!57;UBERON:0005068!5.58e-68!57;UBERON:0006241!5.58e-68!57;UBERON:0007135!5.58e-68!57;UBERON:0003075!6.04e-63!86;UBERON:0007284!6.04e-63!86;UBERON:0000073!1.22e-62!94;UBERON:0001016!1.22e-62!94;UBERON:0000955!1.34e-59!69;UBERON:0006238!1.34e-59!69;UBERON:0002346!2.38e-59!90;UBERON:0002616!5.40e-59!59;UBERON:0002020!4.90e-51!34;UBERON:0003528!4.90e-51!34;UBERON:0001893!1.50e-50!34;UBERON:0002780!2.86e-49!41;UBERON:0001890!2.86e-49!41;UBERON:0006240!2.86e-49!41;UBERON:0002791!6.89e-49!33;UBERON:0003080!7.62e-48!42;UBERON:0001869!2.15e-47!32;UBERON:0003056!9.99e-44!61;UBERON:0000033!1.38e-39!123;UBERON:0000153!2.55e-38!129;UBERON:0007811!2.55e-38!129;UBERON:0004121!2.21e-35!169;UBERON:0000956!2.30e-35!25;UBERON:0000203!2.30e-35!25;UBERON:0000924!4.10e-34!173;UBERON:0006601!4.10e-34!173;UBERON:0007023!1.07e-30!115;UBERON:0002619!1.98e-30!22;UBERON:0001950!7.26e-27!20;UBERON:0003076!1.77e-20!15;UBERON:0003057!1.77e-20!15;UBERON:0002308!4.91e-17!9;UBERON:0000125!4.91e-17!9;UBERON:0002420!7.01e-17!9;UBERON:0007245!7.01e-17!9;UBERON:0010009!7.01e-17!9;UBERON:0010011!7.01e-17!9;UBERON:0000454!7.01e-17!9;UBERON:0004733!1.50e-15!12;UBERON:0002028!1.50e-15!12;UBERON:0007277!1.50e-15!12;UBERON:0004732!3.78e-14!13;UBERON:0000025!5.37e-14!194;UBERON:0009663!2.38e-13!7;UBERON:0000064!3.44e-12!219;UBERON:0002298!7.15e-12!8;UBERON:0000200!1.02e-11!6;UBERON:0000119!2.72e-11!312;UBERON:0000483!4.81e-11!309;UBERON:0000349!1.09e-10!5;UBERON:0002680!2.09e-10!9;UBERON:0001895!2.09e-10!9;UBERON:0010092!2.09e-10!9;UBERON:0002021!9.73e-10!5;UBERON:0000062!4.10e-09!511;UBERON:0004111!4.26e-09!241;UBERON:0000475!4.46e-09!365;UBERON:0000369!7.14e-09!4;UBERON:0002435!7.14e-09!4;UBERON:0000204!7.14e-09!4;UBERON:0010082!7.14e-09!4;UBERON:0001871!1.11e-08!7;UBERON:0000477!2.48e-08!286;UBERON:0000467!4.84e-08!625;UBERON:0000480!5.47e-08!626;UBERON:0000922!2.24e-07!612;UBERON:0000923!2.65e-07!604;UBERON:0005291!2.65e-07!604;UBERON:0006598!2.65e-07!604;UBERON:0002532!2.65e-07!604;UBERON:0000468!2.96e-07!659;UBERON:0002050!2.98e-07!605;UBERON:0005423!2.98e-07!605;UBERON:0001896!4.42e-07!3;UBERON:0005290!4.42e-07!3;UBERON:0010096!4.42e-07!3;UBERON:0005383!5.17e-07!3;UBERON:0005382!5.17e-07!3;UBERON:0000988!6.92e-07!3;UBERON:0006331!8.23e-07!3 | ||
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|short_description=p2@SLC1A3 | |short_description=p2@SLC1A3 | ||
}} | }} |
Latest revision as of 19:21, 17 September 2015
Short description: | p2@SLC1A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC1A3_5end |
Coexpression cluster: | C1961_Neural_cerebellum_medulla_mesothelioma_hippocampus_spinal_Astrocyte |
Association with transcript: | 38bp_to_ENST00000513646_5end |
EntrezGene: | SLC1A3 |
HGNC: | 10941 |
UniProt: | E7EUV6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.16e-10 | 3 |
adult endothelial progenitor cell | 2.63e-10 | 3 |
neuronal stem cell | 4.21e-07 | 8 |